Sequence Properties
first value : protein
second value (mature protein)
|
Length (aa):  |
315 |
| PWM (Da): |
33044.81 |
|
| PI (pH):
| 9.24 |
|
Sequence 357
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MAAPPLKVGYYLRTCPLAENIIKQTVFNAVSRNPGMAAGLVRLHFHDCFVRGCDASVLLKSTPGNPAERDHPANNPSLRGFEIIDQAKARLEALCPGTVSCADIVAFAARDSAQFASRNSALFTGGIIYDVPAGRRDGRVSRLPEVTQNLPPPSFNAQQLIANFARKGLSVDEMVTLSGAHSIGISHCSSFSSRLYAFNATHAQDPTLDRTYATFLKTKCPPPSNKTQPDPTVPLxxITANTLDNKYYIQLLQRRGLLTSDETLYTSPSTSGLVVNNARNGYTWSWKFAKxMVKMGSIEVLAGxxxxxxxCSVVN* |
Retrieve as FASTA
|
|
| Remarks |
Complete sequence from NGS (short 3 'end is missing due to "n" in the sequence). |
DNA ►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TGGCAGCTCCCCCACTAAAGGTGGGATACTACCTCCGTACTTGCCCGTTGGCAGAAAATATCATCAAGCAAACCGTGTTCAACGCTGTCTCGAGGAACCCTGGGATGGCGGCCGGTCTTG
TTCGCCTGCATTTTCACGACTGCTTCGTTAGGGTACGGTGAAGTATTTATGCTCAAAAGTTTTCCCTTAATCGACTTATTTCGCTTTCTTTAAATATTAATTTCTTCCCTTTTGAGTAAT
TCCCTTTGCTTTATACTTGAAATGATTGGAAGGAAAATGTTGAAAGTGTGCTAGAGAATTTGCTAAGACTCTTAAAATATGTATTGGAAATGTAAATTTTTATTATGAGGCATATAGTTT
CTTTTGTATCGTGTGTGTGCTCGTGTGTATGGTTGATAGTTATTTTGTGATTTCTATACTCTTACTGACTTTCTAGACTTATCTCAGGGCTGTGATGCTTCAGTGCTCTTGAAATCAACC
CCAGGAAACCCGGCGGAAAGAGATCACCCCGCTAACAACCCTAGCCTCCGAGGGTTTGAAATCATCGACCAGGCCAAGGCCCGGCTCGAAGCCTTGTGCCCTGGGACAGTCTCGTGTGCC
GACATCGTCGCCTTTGCTGCCCGTGACAGTGCCCAATTTGCCAGCCGCAACAGTGCCCTATTCACTGGGGGCATAATCTACGACGTCCCTGCTGGCCGCCGCGACGGCCGTGTCTCTCGC
CTCCCGGAAGTCACACAGAACCTCCCGCCGCCGAGCTTCAACGCCCAGCAGCTCATTGCCAACTTCGCTAGGAAAGGGCTCTCGGTGGATGAGATGGTGACCCTCTCGGGAGCGCACTCG
ATCGGAATCTCGCACTGCTCTTCGTTCTCGAGCCGCCTCTACGCGTTCAACGCCACCCACGCCCAAGATCCTACCTTGGACCGTACGTACGCCACTTTCCTGAAGACCAAGTGCCCGCCA
CCGAGCAACAAGACCCAACCGGACCCAACCGTGCCGCTGATNANCATCACAGCCAACACTCTGGACAACAAGTACTACATTCAGTTGCTGCAGCGCCGCGGCTTGTTGACTTCCGACGAG
ACGCTGTACACGAGTCCCTCGACTTCGGGGCTGGTCGTGAACAACGCGAGGAATGGCTATACTTGGAGCTGGAAGTTCGCCAAGCANATGGTGAAGATGGGCTCGATCGAAGTGCTCGCT
GGNNNNNNNNNNNNNNNNNNNNTGTGCAGTGTCGTGAACTAA |
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TGGCAGCTCCCCCACTAAAGGTGGGATACTACCTCCGTACTTGCCCGTTGGCAGAAAATATCATCAAGCAAACCGTGTTCAACGCTGTCTCGAGGAACCCTGGGATGGCGGCCGGTCTTG
TTCGCCTGCATTTTCACGACTGCTTCGTTAGGGGCTGTGATGCTTCAGTGCTCTTGAAATCAACCCCAGGAAACCCGGCGGAAAGAGATCACCCCGCTAACAACCCTAGCCTCCGAGGGT
TTGAAATCATCGACCAGGCCAAGGCCCGGCTCGAAGCCTTGTGCCCTGGGACAGTCTCGTGTGCCGACATCGTCGCCTTTGCTGCCCGTGACAGTGCCCAATTTGCCAGCCGCAACAGTG
CCCTATTCACTGGGGGCATAATCTACGACGTCCCTGCTGGCCGCCGCGACGGCCGTGTCTCTCGCCTCCCGGAAGTCACACAGAACCTCCCGCCGCCGAGCTTCAACGCCCAGCAGCTCA
TTGCCAACTTCGCTAGGAAAGGGCTCTCGGTGGATGAGATGGTGACCCTCTCGGGAGCGCACTCGATCGGAATCTCGCACTGCTCTTCGTTCTCGAGCCGCCTCTACGCGTTCAACGCCA
CCCACGCCCAAGATCCTACCTTGGACCGTACGTACGCCACTTTCCTGAAGACCAAGTGCCCGCCACCGAGCAACAAGACCCAACCGGACCCAACCGTGCCGCTGATNANCATCACAGCCA
ACACTCTGGACAACAAGTACTACATTCAGTTGCTGCAGCGCCGCGGCTTGTTGACTTCCGACGAGACGCTGTACACGAGTCCCTCGACTTCGGGGCTGGTCGTGAACAACGCGAGGAATG
GCTATACTTGGAGCTGGAAGTTCGCCAAGCANATGGTGAAGATGGGCTCGATCGAAGTGCTCGCTGGNNNNNNNNNNNNNNNNNNNNTGTGCAGTGTCGTGAACTAA |
Retrieve as FASTA
|
|
