Sequence Properties
first value : protein
second value (mature protein)
|
Length (aa):  |
316 |
| PWM (Da): |
33044.81 |
|
| PI (pH):
| 9.24 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MAAPPLKVGYYLRTCPLAENIIKQTVFNAVSRNPGMAAGLVRLHFHDCFVRGCDASVLLKSTPGNPAERDHPANNPSLRGFEIIDQAKARLEALCPGTVSCADIVAFAARDSAQFASRNSALFTGGIIYDVPAGRRDGRVSRLPEVTQNLPPPSFNAQQLIANFARKGLSVDEMVTLSGAHSIGISHCSSFSSRLYAFNATHAQDPTLDRTYATFLKTKCPPPSNKTQPDPTVPLxxITANTLDNKYYIQLLQRRGLLTSDETLYTSPSTSGLVVNNARNGYTWSWKFAKxMVKMGSIEVLAGxxxxxxxCSVVN* |
Retrieve as FASTA
|
|
| Remarks |
Complete sequence from NGS (short 3 'end is missing due to "n" in the sequence). |
DNA ►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCAGCTCCCCCACTAAAGGTGGGATACTACCTCCGTACTTGCCCGTTGGCAGAAAATATCATCAAGCAAACCGTGTTCAACGCTGTCTCGAGGAACCCTGGGATGGCGGCCGGTCTT
GTTCGCCTGCATTTTCACGACTGCTTCGTTAGGGTACGGTGAAGTATTTATGCTCAAAAGTTTTCCCTTAATCGACTTATTTCGCTTTCTTTAAATATTAATTTCTTCCCTTTTGAGTAA
TTCCCTTTGCTTTATACTTGAAATGATTGGAAGGAAAATGTTGAAAGTGTGCTAGAGAATTTGCTAAGACTCTTAAAATATGTATTGGAAATGTAAATTTTTATTATGAGGCATATAGTT
TCTTTTGTATCGTGTGTGTGCTCGTGTGTATGGTTGATAGTTATTTTGTGATTTCTATACTCTTACTGACTTTCTAGACTTATCTCAGGGCTGTGATGCTTCAGTGCTCTTGAAATCAAC
CCCAGGAAACCCGGCGGAAAGAGATCACCCCGCTAACAACCCTAGCCTCCGAGGGTTTGAAATCATCGACCAGGCCAAGGCCCGGCTCGAAGCCTTGTGCCCTGGGACAGTCTCGTGTGC
CGACATCGTCGCCTTTGCTGCCCGTGACAGTGCCCAATTTGCCAGCCGCAACAGTGCCCTATTCACTGGGGGCATAATCTACGACGTCCCTGCTGGCCGCCGCGACGGCCGTGTCTCTCG
CCTCCCGGAAGTCACACAGAACCTCCCGCCGCCGAGCTTCAACGCCCAGCAGCTCATTGCCAACTTCGCTAGGAAAGGGCTCTCGGTGGATGAGATGGTGACCCTCTCGGGAGCGCACTC
GATCGGAATCTCGCACTGCTCTTCGTTCTCGAGCCGCCTCTACGCGTTCAACGCCACCCACGCCCAAGATCCTACCTTGGACCGTACGTACGCCACTTTCCTGAAGACCAAGTGCCCGCC
ACCGAGCAACAAGACCCAACCGGACCCAACCGTGCCGCTGATNANCATCACAGCCAACACTCTGGACAACAAGTACTACATTCAGTTGCTGCAGCGCCGCGGCTTGTTGACTTCCGACGA
GACGCTGTACACGAGTCCCTCGACTTCGGGGCTGGTCGTGAACAACGCGAGGAATGGCTATACTTGGAGCTGGAAGTTCGCCAAGCANATGGTGAAGATGGGCTCGATCGAAGTGCTCGC
TGGNNNNNNNNNNNNNNNNNNNNTGTGCAGTGTCGTGAACTAA |
Retrieve as FASTA
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|
CDS►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCAGCTCCCCCACTAAAGGTGGGATACTACCTCCGTACTTGCCCGTTGGCAGAAAATATCATCAAGCAAACCGTGTTCAACGCTGTCTCGAGGAACCCTGGGATGGCGGCCGGTCTT
GTTCGCCTGCATTTTCACGACTGCTTCGTTAGGGGCTGTGATGCTTCAGTGCTCTTGAAATCAACCCCAGGAAACCCGGCGGAAAGAGATCACCCCGCTAACAACCCTAGCCTCCGAGGG
TTTGAAATCATCGACCAGGCCAAGGCCCGGCTCGAAGCCTTGTGCCCTGGGACAGTCTCGTGTGCCGACATCGTCGCCTTTGCTGCCCGTGACAGTGCCCAATTTGCCAGCCGCAACAGT
GCCCTATTCACTGGGGGCATAATCTACGACGTCCCTGCTGGCCGCCGCGACGGCCGTGTCTCTCGCCTCCCGGAAGTCACACAGAACCTCCCGCCGCCGAGCTTCAACGCCCAGCAGCTC
ATTGCCAACTTCGCTAGGAAAGGGCTCTCGGTGGATGAGATGGTGACCCTCTCGGGAGCGCACTCGATCGGAATCTCGCACTGCTCTTCGTTCTCGAGCCGCCTCTACGCGTTCAACGCC
ACCCACGCCCAAGATCCTACCTTGGACCGTACGTACGCCACTTTCCTGAAGACCAAGTGCCCGCCACCGAGCAACAAGACCCAACCGGACCCAACCGTGCCGCTGATNANCATCACAGCC
AACACTCTGGACAACAAGTACTACATTCAGTTGCTGCAGCGCCGCGGCTTGTTGACTTCCGACGAGACGCTGTACACGAGTCCCTCGACTTCGGGGCTGGTCGTGAACAACGCGAGGAAT
GGCTATACTTGGAGCTGGAAGTTCGCCAAGCANATGGTGAAGATGGGCTCGATCGAAGTGCTCGCTGGNNNNNNNNNNNNNNNNNNNNTGTGCAGTGTCGTGAACTAA |
Retrieve as FASTA
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