Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
322 (292) |
| PWM (Da): |
28204.21 (25631.9) |
Transmb domain: |
i13-35o |
| PI (pH):
| 9.51 (9.06) |
Peptide Signal:
| cut: 31 range:31-322 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASTPGATAY SRRFAIFSSM LVLxxxxxxx xxxxxxxxxx xxxAAIRTSI RTAVSRERRM AASLIRLHFH DCFVQGCDAx xxxxxxxxxx xxxxxxxxGS VRGYEVIDDA KSEVEKIxxx
xxxxxxxxxx xxxxxxxCVG SPSWTVKLGR RDSITASPSL VSSDLPSFQD GLEILVSRFA GKGLSARDMV ALSGAHTLGQ AQCFTFRDRI YSNGSNIDAG FASTRKRRCP ASGGDATLAP
LDLVTPNSFD NNYFKNLMQK KGLLESDQVL FSGGSTDSIV SDYSKKPASF KSDFAAAMIK MGDISPLTGS SGQIRRICSA LN*
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Retrieve as FASTA
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| Remarks |
Partial sequence from NGS. Short PS and 3 part are missing due to NNNN. |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCAA CCCCTGGCGC TACTGCGTAC TCCCGTCGCT TCGCGATATT TTCTTCGATG CTAGTGCTCn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnG CCGCGATTCG GACTTCCATC AGAACCGCAG TCTCGAGGGA GCGCCGGATG GCTGCTTCTC TCATCCGACT CCATTTCCAC GATTGCTTCG TCCAGGGTTG TGACGCGTCG
Annnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnG GTTCCGTGAG AGGTTACGAG GTGATTGACG ACGCCAAGTC GGAAGTGGAG AAGATCnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnTGTG TAAGTCTTCC CATAGTTCTC AAGATATGCA TCTTATGATC ACTTGATTAC TTTCAAATAT
CGACTACGAG TCTAAATCAT TTTCCTTACT GATATAACTG ATGCTGCTGT GACAAAAATG TAGGTTGGCA GTCCTTCTTG GACGGTGAAG CTCGGAAGAA GAGACTCGAT CACCGCAAGC
CCATCGCTCG TGTCAAGCGA TCTTCCATCG TTTCAAGATG GCCTTGAGAT ACTCGTATCT CGATTTGCAG GCAAGGGCCT TAGTGCTAGA GACATGGTTG CCCTCTCAGG TATATACGAA
ATGCTTATTC AAACCTGACG ATGGAGCTTG GCCTATGCAA GAATTTCTCA TTCTTGCTCA CAAGCTCGAA TGATATTGAA TAAAAGGGAA AAATAATGTT GATGTGCCCT TTTCTGCCAA
CGTTATGCAG GTGCTCACAC TCTAGGGCAA GCTCAGTGCT TCACGTTCAG GGACAGGATC TACAGCAACG GCAGCAACAT CGACGCGGGA TTCGCCAGCA CCCGTAAGCG CCGGTGCCCG
GCAAGCGGCG GCGATGCCAC TCTAGCCCCA CTCGATTTGG TGACCCCCAA TTCATTCGAC AACAACTACT TCAAGAATCT GATGCAGAAG AAAGGCCTGC TCGAGTCGGA CCAAGTCCTT
TTCAGCGGAG GTTCCACCGA CAGCATCGTC TCCGATTACA GCAAGAAGCC CGCAAGCTTC AAGTCGGATT TCGCGGCTGC CATGATTAAG ATGGGCGACA TAAGTCCGCT CACCGGTTCA
AGTGGCCAGA TCAGGAGGAT TTGCAGTGCT CTAAATTAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCAA CCCCTGGCGC TACTGCGTAC TCCCGTCGCT TCGCGATATT TTCTTCGATG CTAGTGCTCn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnG CCGCGATTCG GACTTCCATC AGAACCGCAG TCTCGAGGGA GCGCCGGATG GCTGCTTCTC TCATCCGACT CCATTTCCAC GATTGCTTCG TCCAGGGTTG TGACGCnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnGGTTCC GTGAGAGGTT ACGAGGTGAT TGACGACGCC AAGTCGGAAG TGGAGAAGAT Cnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nTGTGTTGGC AGTCCTTCTT GGACGGTGAA GCTCGGAAGA AGAGACTCGA TCACCGCAAG CCCATCGCTC
GTGTCAAGCG ATCTTCCATC GTTTCAAGAT GGCCTTGAGA TACTCGTATC TCGATTTGCA GGCAAGGGCC TTAGTGCTAG AGACATGGTT GCCCTCTCAG GTGCTCACAC TCTAGGGCAA
GCTCAGTGCT TCACGTTCAG GGACAGGATC TACAGCAACG GCAGCAACAT CGACGCGGGA TTCGCCAGCA CCCGTAAGCG CCGGTGCCCG GCAAGCGGCG GCGATGCCAC TCTAGCCCCA
CTCGATTTGG TGACCCCCAA TTCATTCGAC AACAACTACT TCAAGAATCT GATGCAGAAG AAAGGCCTGC TCGAGTCGGA CCAAGTCCTT TTCAGCGGAG GTTCCACCGA CAGCATCGTC
TCCGATTACA GCAAGAAGCC CGCAAGCTTC AAGTCGGATT TCGCGGCTGC CATGATTAAG ATGGGCGACA TAAGTCCGCT CACCGGTTCA AGTGGCCAGA TCAGGAGGAT TTGCAGTGCT
CTAAATTAA
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Retrieve as FASTA
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