Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
315 |
PWM (Da): |
33566.68 |
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PI (pH):
| 8.21 |
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Sequence 356
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MFSFITFLNSGSATLQVGFYRSTCPSAESVVRKAVNKAVAKNPGIGAGLIRMHFHDCFVRGCDASILLDSTPGNPSEKEHPANNPSLRGFEVIDEAKAELESLCPQKVSCADILAFAARDSAYKLGSINYAVPAGRRDGLVSLKDEPSQNLPPFFFNAQQLEANFASKGLSLDEMVTLSGAHSIGVSHCSSFSDRLYSFNATHTQDPSMDTKxxSQLKSKCPNNGGASDPTVPLDLVTPNRLDNKYYTNLKNHRGLLTSDQTLFNSPSTANIVRSNANNGGAWANKFAAAMVKMGSIDILTGSEGEIRRKCRVVN |
Retrieve as FASTA
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Remarks |
Complete sequence from NGS. Two XX in frame due to NNN in DNA. |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTTCTCGTTCATCACCTTTCTGAACTCGGGTTCAGCAACTCTCCAAGTGGGATTCTACCGCTCCACTTGTCCGTCTGCGGAGTCCGTCGTCCGGAAAGCAGTGAACAAAGCGGTGGCC AAGAACCCTGGCATCGGTGCTGGGCTTATTAGAATGCACTTCCATGATTGCTTTGTTCGGGTATGCAAGAACTTCTTTACACATTTCAGAAGTAGTGGTTATAATCTCGTTTGCGGAAAA GTACAAAAGATATCGATGAGATGGGAGTGTGGGGAGTACATTTCACATTCTATCACTGGTCCAGGACTTTTTAAGTTTTGTCTAACCGACCGGTCACAAAATAATCTATATTTCTTNNNN NNNNNNNNNNNNNNNNNNNNNNTAATTAATTGGCTGATCTTTGATCCAATAATAGGGTTGCGATGCTTCAATCTTGCTGGATTCGACCCCAGGCAACCCATCAGAGAAGGAACATCCCGC AAACAACCCGAGCTTGCGAGGTTTTGAAGTCATCGATGAGGCGAAGGCTGAGCTAGAGTCTCTATGCCCGCAGAAGGTCTCATGCGCTGACATTCTTGCATTCGCAGCACGCGACAGTGC CTACAAACTCGGCAGCATCAACTACGCAGTCCCAGCGGGTCGCCGCGATGGGCTGGTCTCACTCAAAGACGAGCCCTCCCAGAATCTTCCTCCTTTCTTCTTCAATGCGCAACAATTAGA AGCTAATTTTGCGAGCAAAGGCCTCTCTCTGGACGAGATGGTGACGCTATCCGGTGCACATTCGATTGGAGTCTCGCATTGCTCCTCCTTCTCGGACCGCTTGTACTCCTTCAATGCCAC TCACACCCAAGACCCTTCAATGGACACCAAGTTNNNTAGTCAACTGAAATCTAAGTGTCCGAACAATGGAGGCGCTAGCGATCCCACTGTGCCATTGGACTTGGTCACGCCGAACAGGCT AGACAACAAGTACTACACTAATTTGAAGAACCACCGAGGCCTATTGACTTCTGATCAGACTCTTTTTAACAGCCCTTCAACGGCTAATATCGTGAGGAGCAATGCAAATAATGGCGGAGC ATGGGCTAACAAGTTCGCGGCAGCAATGGTGAAGATGGGATCGATCGACATCCTCACTGGGAGTGAGGGTGAGATTAGGAGGAAATGCAGAGTGGTGAACTAG |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTTCTCGTTCATCACCTTTCTGAACTCGGGTTCAGCAACTCTCCAAGTGGGATTCTACCGCTCCACTTGTCCGTCTGCGGAGTCCGTCGTCCGGAAAGCAGTGAACAAAGCGGTGGCC AAGAACCCTGGCATCGGTGCTGGGCTTATTAGAATGCACTTCCATGATTGCTTTGTTCGGGGTTGCGATGCTTCAATCTTGCTGGATTCGACCCCAGGCAACCCATCAGAGAAGGAACAT CCCGCAAACAACCCGAGCTTGCGAGGTTTTGAAGTCATCGATGAGGCGAAGGCTGAGCTAGAGTCTCTATGCCCGCAGAAGGTCTCATGCGCTGACATTCTTGCATTCGCAGCACGCGAC AGTGCCTACAAACTCGGCAGCATCAACTACGCAGTCCCAGCGGGTCGCCGCGATGGGCTGGTCTCACTCAAAGACGAGCCCTCCCAGAATCTTCCTCCTTTCTTCTTCAATGCGCAACAA TTAGAAGCTAATTTTGCGAGCAAAGGCCTCTCTCTGGACGAGATGGTGACGCTATCCGGTGCACATTCGATTGGAGTCTCGCATTGCTCCTCCTTCTCGGACCGCTTGTACTCCTTCAAT GCCACTCACACCCAAGACCCTTCAATGGACACCAAGTTNNNTAGTCAACTGAAATCTAAGTGTCCGAACAATGGAGGCGCTAGCGATCCCACTGTGCCATTGGACTTGGTCACGCCGAAC AGGCTAGACAACAAGTACTACACTAATTTGAAGAACCACCGAGGCCTATTGACTTCTGATCAGACTCTTTTTAACAGCCCTTCAACGGCTAATATCGTGAGGAGCAATGCAAATAATGGC GGAGCATGGGCTAACAAGTTCGCGGCAGCAATGGTGAAGATGGGATCGATCGACATCCTCACTGGGAGTGAGGGTGAGATTAGGAGGAAATGCAGAGTGGTGAACTAG |
Retrieve as FASTA
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