Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
222 |
PWM (Da): |
23377.6 |
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PI (pH):
| 7.25 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
SLRGFDVVDT IKSEVEKLCP GVVSCADILA IVARDSVVEL GGQSWQVQLG RRDSTTASLN TANTDLPAPT LNLSALITSF SNKGFTAEEM VTLSGSHTIG QxRCVTFRAR LYNESNIDSS
FATTLKANCP SSGGDNNLSP LDVTSPTSFD NAYFTNLVSQ KGLLHSDQQL FSGGSTNAQV TAYSKNFGSF QNDFAKAMVK MGGLSPLTGS TGQIRTNCRR VN
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Retrieve as FASTA
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Remarks |
Partial sequence from NGS. 5' is missing due to NNNN. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TCCTTGAGGG GATTCGATGT GGTTGACACC ATCAAGTCAG AAGTGGAAAA ACTGTGCCCT GGTGTCGTCT CGTGCGCTGA CATCTTAGCC ATTGTTGCGA GAGATTCCGT CGTCGAATTG
ATTTTCAGTT GGGGGGACAG AGTTGGCAAG TTCAACTAGG AAGAAGAGAT TCAACCACGG CGAGCCTGAA CACTGCTAAT ACTGACCTCC CAGCTCCAAC TCTTAATCTT AGTGCCCTAA
TCACTTCTTT CTCTAACAAA GGCTTCACTG CCGAAGAAAT GGTAACCCTC TCAGGATCTC ACACCATAGG CCAAnCCAGG TGCGTGACAT TCCGGGCCCG TCTTTACAAC GAAAGCAACA
TAGACTCGTC GTTCGCCACA ACTTTAAAAG CCAATTGCCC TAGCTCGGGA GGTGACAACA ACCTCTCCCC TCTTGACGTC ACCAGCCCGA CGTCCTTCGA CAATGCCTAC TTCACCAACT
TGGTGAGCCA AAAGGGTTTG CTTCATTCGG ACCAGCAATT GTTCAGTGGA GGTTCGACGA ATGCTCAAGT GACTGCCTAC AGCAAGAACT TTGGCTCGTT CCAGAATGAT TTTGCCAAGG
CCATGGTCAA GATGGGTGGC CTTAGCCCTC TCACCGGGTC CACTGGTCAA ATCAGGACGA ATTGTAGAAG AGTCAATTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TCCTTGAGGG GATTCGATGT GGTTGACACC ATCAAGTCAG AAGTGGAAAA ACTGTGCCCT GGTGTCGTCT CGTGCGCTGA CATCTTAGCC ATTGTTGCGA GAGATTCCGT CGTCGAATTG
GGGGGACAGA GTTGGCAAGT TCAACTAGGA AGAAGAGATT CAACCACGGC GAGCCTGAAC ACTGCTAATA CTGACCTCCC AGCTCCAACT CTTAATCTTA GTGCCCTAAT CACTTCTTTC
TCTAACAAAG GCTTCACTGC CGAAGAAATG GTAACCCTCT CAGGATCTCA CACCATAGGC CAAnCCAGGT GCGTGACATT CCGGGCCCGT CTTTACAACG AAAGCAACAT AGACTCGTCG
TTCGCCACAA CTTTAAAAGC CAATTGCCCT AGCTCGGGAG GTGACAACAA CCTCTCCCCT CTTGACGTCA CCAGCCCGAC GTCCTTCGAC AATGCCTACT TCACCAACTT GGTGAGCCAA
AAGGGTTTGC TTCATTCGGA CCAGCAATTG TTCAGTGGAG GTTCGACGAA TGCTCAAGTG ACTGCCTACA GCAAGAACTT TGGCTCGTTC CAGAATGATT TTGCCAAGGC CATGGTCAAG
ATGGGTGGCC TTAGCCCTCT CACCGGGTCC ACTGGTCAAA TCAGGACGAA TTGTAGAAGA GTCAATTGA
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Retrieve as FASTA
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