Entry information : EglPrx[P]173
Entry ID 10992
Creation 2012-05-15 (Qiang Li)
Last sequence changes 2013-02-06 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-11 (Christophe Dunand)
Peroxidase information: EglPrx[P]173
Name EglPrx[P]173
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus globulus    [TaxId: 34317 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EglPrx[P]173
start..stop
S start..stop
EgrPrx[P]173 137 3.77e-44 1..66 56..121
EguPrx[P]173 95 1.3e-27 1..66 56..121
AcoPrx32 43 0.000000694 40..65 293..318
AcoPrx116 43 0.000000694 40..65 293..318
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10992' 'join(1..264)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..264 262  
join(1..264)


exon

Literature and cross-references EglPrx[P]173
Protein sequence: EglPrx[P]173
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   63
PWM (Da):   %s   6752.33  
PI (pH):   %s   8.09
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

KALLPHST*K HGPLPIRCCS F*PTSEPPHS RPSCSDFN*F FTEFAQLMWR MGAVGVLGGG VGELRI 

Retrieve as FASTA  
Remarks Pseudogene from NGS. Short PS with stops in it.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AAGGCACTAC TGCCCCATTC TACTTAAAAG CATGGGCCTC TTCCAATTCG ATGCTGCTCT TTTTGACCAA CAAGTGAGCC ACCACATTCG CGTCCCAGTT GCTCGGACTT CAACTAGTTC 
TTCACCGAAT TTGCACAGTT GATGTGGAGG ATGGGCGCCG TCGGAGTGCT CGGGGGCGGT GTTGGAGAAC TTAGAATA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AAGGCACTAC TGCCCCATTC TACTTAAAAG CATGGGCCTC TTCCAATTCG ATGCTGCTCT TTTTGACCAA CAAGTGAGCC ACCACATTCG CGTCCCAGTT GCTCGGACTT CAACTAGTTC 
TTCACCGAAT TTGCACAGTT GATGTGGAGG ATGGGCGCCG TCGGAGTGCT CGGGGGCGGT GTTGGAGAAC TTAGAATA 

Retrieve as FASTA