Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
257 |
PWM (Da): |
27782.96 |
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PI (pH):
| 7.22 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GFYKSTCPQVEMIVRNAVHKAVSSNPGIEAGLIRLLFHDCFVRGRDASLLLNSSPGNKAERDHPVSRSL*GFE*LMKxKSPVGSRVPKTVSCVDILAFATRESAYQLGGISYAVPAGHHDSLVFREDNMLQNLPPPSFNAKPLVDIFASKGLSERLYAVDNATDAHDPPLDANDPLVALDSTPTRLDNKYFQDLQNHRGILISDQTLYSSSAMADMVADNAHDNRACSLKFPKAMVRMGSIEVLTGSQGEVRRQCSSVN |
Retrieve as FASTA
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Remarks |
Pseudogene from NGS. Short 5' and fragment are missing due to NNNN. Stops in frame. |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GGGTTCTACAAATCGACATGTCCACAAGTGGAGATGATTGTGAGGAATGCTGTGCATAAGGCTGTCTCCAGCAACCCCGGCATTGAAGCCGGTCTCATTAGGTTGCTGTTCCATGATTGT TTTGTCAGGGTAATGTGATAGATAATCCCTTAATGTCAAGCCAAGTATATACGCGCATGTGCATGGAAAAATATTGCTTAGACTCAGTTCTATCCATGAGCGTCACGGTGCTGGAGACTG ATAAATAGTAACCAAGTTAAACTGTGATCGCAGGGCCGTGATGCTTCTCTGCTCCTAAATTCCAGCCCAGGAAATAAGGCGGAACGAGACCATCCTGTTAGCCGCAGCTTATGAGGATTC GAGTAATTGATGAAGCNNAAAAGCCCGGTTGGAAGCCGCGTCCCCAAAACAGTATCATGTGTGGACATCCTCGCCTTTGCCACTCGCGAAAGCGCATACCAGCTAGGAGGAATTAGCTAC GCAGTCCCCGCTGGCCACCACGACAGCCTCGTCTTTCGCGAAGACAACATGTTACAGAACCTGCCGCCCCCTTCCTTCAATGCCAAGCCGCTGGTGGACATTTTCGCTAGCAAAGGGCTG TCTGAACGCCTCTACGCTGTTGACAACGCAACCGATGCCCATGATCCACCATTGGATGCCAAGTACATGGCTTTCCTCGGGACCATTTGCCCGAGGCCACAGAGCAGAAACAGCGCAGCG ATCCACTGGTGGCACTAGACTCAACGCCGACTCGCTTGGACAACAAGTATTTTCAGGATCTGCAGAATCACCGTGGCATATTGATTTCGGACCAGACCTTGTACTCGAGCTCTGCAATGG CCGACATGGTCGCCGACAATGCTCACGACAATAGAGCCTGCAGTCTCAAGTTCCCAAAGGCCATGGTGCGGATGGGCTCCATTGAGGTCCTCACAGGCTCACAAGGTGAGGTTAGAAGAC AGTGCAGCTCCGTGAAT |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GGGTTCTACAAATCGACATGTCCACAAGTGGAGATGATTGTGAGGAATGCTGTGCATAAGGCTGTCTCCAGCAACCCCGGCATTGAAGCCGGTCTCATTAGGTTGCTGTTCCATGATTGT TTTGTCAGGGGCCGTGATGCTTCTCTGCTCCTAAATTCCAGCCCAGGAAATAAGGCGGAACGAGACCATCCTGTTAGCCGCAGCTTATGAGGATTCGAGTAATTGATGAAGCNNAAAAGC CCGGTTGGAAGCCGCGTCCCCAAAACAGTATCATGTGTGGACATCCTCGCCTTTGCCACTCGCGAAAGCGCATACCAGCTAGGAGGAATTAGCTACGCAGTCCCCGCTGGCCACCACGAC AGCCTCGTCTTTCGCGAAGACAACATGTTACAGAACCTGCCGCCCCCTTCCTTCAATGCCAAGCCGCTGGTGGACATTTTCGCTAGCAAAGGGCTGTCTGAACGCCTCTACGCTGTTGAC AACGCAACCGATGCCCATGATCCACCATTGGATGCCAAGTACATGGCTTTCCTCGGGACCATTTGCCCGAGGCCACAGAGCAGAAACAGCGCAGCGATCCACCAGAATCACCGTGGCATA TTGATTTCGGACCAGACCTTGTACTCGAGCTCTGCAATGGCCGACATGGTCGCCGACAATGCTCACGACAATAGAGCCTGCAGTCTCAAGTTCCCAAAGGCCATGGTGCGGATGGGCTCC ATTGAGGTCCTCACAGGCTCACAAGGTGAGGTTAGAAGACAGTGCAGCTCCGTGAAT |
Retrieve as FASTA
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