Entry information : EglPrx[P]180
Entry ID 10999
Creation 2012-05-15 (Qiang Li)
Last sequence changes 2013-02-06 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2012-05-15 (Qiang Li)
Peroxidase information: EglPrx[P]180
Name EglPrx[P]180
Class Class III peroxidase     [Orthogroup: Prx010]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus globulus    [TaxId: 34317 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EglPrx[P]180
start..stop
S start..stop
EgrPrx[P]180 375 1e-135 1..183 1..183
EguPrx[P]180 369 5e-133 1..183 1..183
EcamPrx[P]89 346 1e-122 1..183 101..283
EgrPrx[P]89 338 3e-119 1..183 109..291
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..166 166 N° 2 330..718 389  
join(1..166,330..718)


exon

Literature and cross-references EglPrx[P]180
Protein sequence: EglPrx[P]180
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   184 (296)
PWM (Da):   %s   19452.39 (31116.3)  
PI (pH):   %s   5.17 (7.93) Peptide Signal:   %s   cut: 25 range:25-320
Sequence 297
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
LGGPTWTVQLGRRDSTTASLSAANSDIPSPLSDLSGLISDFANKGFSAKEMVALSGTHTIGRARCFLFRARIYNEENIDPAFAMS*RQNCPGAGGDGNLVPLETGNGDMFNNNCFKDLVSMKGLLHSDQQLFNNGSTDAQVKAYSLDSASFFADLANAMVKMGNLSPLTGTDGEVWTNCRKVNG

Retrieve as FASTA  
Remarks Pseudogene from NGS. 5' and PS are missing due to NNNN. Stop in it.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TTGGGTGGACCTACGTGGACCGTTCAACTAGGTAGGAGAGATTCAACCACCGCAAGTTTGAGCGCTGCAAACAGCGATATTCCTTCGCCACTCTCGGACCTTAGCGGTCTCATATCTGAC
TTCGCTAATAAGGGATTCTCTGCCAAAGAAATGGTCGCCCTCTCAG
GTGTTTCATCTAATTTACTTGGCCATGGCAAAAAATGTCATTAATCTAAGAGAGAAGTATCATTCTTTTGGTCT
TCGCACTCTGGAAAGGCTTTCTTTGATTGTCGCTGAAAGAAAATTGCCCGACCATGATCCACCGTCTTACATGCGCTCTTGTGCCGCAGGAACTCACACGATAGGCCGAGCAAGGTGCTT
CCTGTTCCGTGCTCGCATCTACAACGAGGAGAACATCGACCCCGCATTCGCCATGTCGTAGAGGCAGAACTGTCCCGGTGCGGGCGGGGATGGTAATCTCGTGCCGCTTGAGACCGGCAA
CGGCGACATGTTCAACAATAACTGCTTCAAGGACCTAGTGAGCATGAAGGGCCTCCTGCACTCGGACCAGCAGCTGTTCAACAACGGATCCACCGACGCGCAGGTGAAGGCCTACAGCCT
TGACTCGGCCTCCTTCTTCGCCGATCTGGCCAATGCCATGGTGAAGATGGGGAACCTCAGCCCCCTCACAGGAACGGATGGGGAAGTCTGGACCAACTGCAGGAAAGTTAATGGATCT

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TTGGGTGGACCTACGTGGACCGTTCAACTAGGTAGGAGAGATTCAACCACCGCAAGTTTGAGCGCTGCAAACAGCGATATTCCTTCGCCACTCTCGGACCTTAGCGGTCTCATATCTGAC
TTCGCTAATAAGGGATTCTCTGCCAAAGAAATGGTCGCCCTCTCAG
GAACTCACACGATAGGCCGAGCAAGGTGCTTCCTGTTCCGTGCTCGCATCTACAACGAGGAGAACATCGACCCC
GCATTCGCCATGTCGTAGAGGCAGAACTGTCCCGGTGCGGGCGGGGATGGTAATCTCGTGCCGCTTGAGACCGGCAACGGCGACATGTTCAACAATAACTGCTTCAAGGACCTAGTGAGC
ATGAAGGGCCTCCTGCACTCGGACCAGCAGCTGTTCAACAACGGATCCACCGACGCGCAGGTGAAGGCCTACAGCCTTGACTCGGCCTCCTTCTTCGCCGATCTGGCCAATGCCATGGTG
AAGATGGGGAACCTCAGCCCCCTCACAGGAACGGATGGGGAAGTCTGGACCAACTGCAGGAAAGTTAATGGATCT

Retrieve as FASTA