Entry information : EglPrx[P]180
Entry ID 10999
Creation 2012-05-15 (Qiang Li)
Last sequence changes 2013-02-06 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2012-05-15 (Qiang Li)
Peroxidase information: EglPrx[P]180
Name EglPrx[P]180
Class Class III peroxidase     [Orthogroup: Prx010]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus globulus    [TaxId: 34317 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EglPrx[P]180
start..stop
S start..stop
EgrPrx[P]180 375 9.89e-136 1..183 1..183
EguPrx[P]180 369 5.04e-133 1..183 1..183
EcamPrx[P]89 346 1.4e-122 1..183 101..283
EgrPrx[P]89 338 2.86e-119 1..183 109..291
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10999' 'join(1..166,330..718)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..166 164 N° 2 330..718 387  
join(1..166,330..718)


exon

Literature and cross-references EglPrx[P]180
Protein sequence: EglPrx[P]180
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   184 (300)
PWM (Da):   %s   19452.39 (32302.1)  
PI (pH):   %s   5.17 (4.80) Peptide Signal:   %s   cut: 30 range:30-329
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
LGGPTWTVQLGRRDSTTASLSAANSDIPSPLSDLSGLISDFANKG
FSAKEMVALS
GTHTIGRARCFLFRARIYNEENIDPAFAMS*RQNCPGAGGDGNLVPLETGNGDMFNNNCFKDLVSMKGLLHSDQQLFNNGSTDAQVKAYSLDSASFFADLANAMVKMGNLSPLTGTDGEV
WTNCRKVNG

Retrieve as FASTA  
Remarks Pseudogene from NGS. 5' and PS are missing due to NNNN. Stop in it.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TTGGGTGGACCTACGTGGACCGTTCAACTAGGTAGGAGAGATTCAACCACCGCAAGTTTGAGCGCTGCAAACAGCGATATTCCTTCGCCACTCTCGGACCTTAGCGGTCTCATATCTGAC
TTCGCTAATAAGGGATTCTCTGCCAAAGAAATGGTCGCCCTCTCAG
AGGTGTTTCATCTAATTTACTTGGCCATGGCAAAAAATGTCATTAATCTAAGAGAGAAGTATCATTCTTTTGGT
CTTCGCACTCTGGAAAGGCTTTCTTTGATTGTCGCTGAAAGAAAATTGCCCGACCATGATCCACCGTCTTACATGCGCTCTTGTGCCGCAGGAACTCACACGATAGGCCGAGCAAGGTGC
TTCCTGTTCCGTGCTCGCATCTACAACGAGGAGAACATCGACCCCGCATTCGCCATGTCGTAGAGGCAGAACTGTCCCGGTGCGGGCGGGGATGGTAATCTCGTGCCGCTTGAGACCGGC
AACGGCGACATGTTCAACAATAACTGCTTCAAGGACCTAGTGAGCATGAAGGGCCTCCTGCACTCGGACCAGCAGCTGTTCAACAACGGATCCACCGACGCGCAGGTGAAGGCCTACAGC
CTTGACTCGGCCTCCTTCTTCGCCGATCTGGCCAATGCCATGGTGAAGATGGGGAACCTCAGCCCCCTCACAGGAACGGATGGGGAAGTCTGGACCAACTGCAGGAAAGTTAATGGATCT

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TTGGGTGGACCTACGTGGACCGTTCAACTAGGTAGGAGAGATTCAACCACCGCAAGTTTGAGCGCTGCAAACAGCGATATTCCTTCGCCACTCTCGGACCTTAGCGGTCTCATATCTGAC
TTCGCTAATAAGGGATTCTCTGCCAAAGAAATGGTCGCCCTCTCAG
GAACTCACACGATAGGCCGAGCAAGGTGCTTCCTGTTCCGTGCTCGCATCTACAACGAGGAGAACATCGACCCC
GCATTCGCCATGTCGTAGAGGCAGAACTGTCCCGGTGCGGGCGGGGATGGTAATCTCGTGCCGCTTGAGACCGGCAACGGCGACATGTTCAACAATAACTGCTTCAAGGACCTAGTGAGC
ATGAAGGGCCTCCTGCACTCGGACCAGCAGCTGTTCAACAACGGATCCACCGACGCGCAGGTGAAGGCCTACAGCCTTGACTCGGCCTCCTTCTTCGCCGATCTGGCCAATGCCATGGTG
AAGATGGGGAACCTCAGCCCCCTCACAGGAACGGATGGGGAAGTCTGGACCAACTGCAGGAAAGTTAATGGATCT

Retrieve as FASTA