Entry information : EglPrx[P]186
Entry ID 11005
Creation 2012-05-15 (Qiang Li)
Last sequence changes 2013-02-06 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-05-11 (Christophe Dunand)
Peroxidase information: EglPrx[P]186
Name EglPrx[P]186
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus globulus    [TaxId: 34317 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EglPrx[P]186
start..stop
S start..stop
EcamPrx[P]186 148 7.52e-48 1..73 97..169
EgrPrx[P]186 140 1.13e-44 1..73 93..165
EguPrx[P]186 137 2.18e-43 1..73 97..169
EgrPrx[P]171 104 5.25e-31 11..73 75..137
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '11005' 'join(1..219)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..219 217  
join(1..219)


exon

Literature and cross-references EglPrx[P]186
Protein sequence: EglPrx[P]186
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   73
PWM (Da):   %s   8025.11  
PI (pH):   %s   6.33
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

HEPYILRQQL LAQLGEPKGL LHLDQxxFSG DLMDHQVTVY LNNLDLIWSN FANAMVKMGG LSHLTKFSDH IRM 

Retrieve as FASTA  
Remarks Pseudogene from NGS. Short 3'.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CATGAGCCTT ACATCCTTCG ACAACAGCTA CTTGCGCAAC TTGGTGAGCC AAAAGGCCTA CTCCACTTAG ACCAACnnnT GTTTAGTGGG GATTTGATGG ACCATCAAGT GACTGTATAC 
CTCAACAATT TGGATTTGAT CTGGAGCAAC TTTGCTAATG CCATGGTCAA GATGGGAGGC CTTAGCCATC TTACCAAGTT TAGTGATCAT ATAAGGATG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CATGAGCCTT ACATCCTTCG ACAACAGCTA CTTGCGCAAC TTGGTGAGCC AAAAGGCCTA CTCCACTTAG ACCAACnnnT GTTTAGTGGG GATTTGATGG ACCATCAAGT GACTGTATAC 
CTCAACAATT TGGATTTGAT CTGGAGCAAC TTTGCTAATG CCATGGTCAA GATGGGAGGC CTTAGCCATC TTACCAAGTT TAGTGATCAT ATAAGGATG 

Retrieve as FASTA