Entry information : EgrPrx[P]190
Entry ID 11008
Creation 2012-05-16 (Qiang Li)
Last sequence changes 2016-03-13 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Achraf Jemmat
Last annotation changes 2016-03-13 (Achraf Jemmat)
Peroxidase information: EgrPrx[P]190
Name EgrPrx[P]190
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx[P]190
start..stop
S start..stop
EguPrx[P]190 191 2e-65 1..101 1..101
EglPrx[P]190 186 1e-63 1..101 1..101
EcamPrx[P]190 117 7e-37 32..90 1..59
PtPrx31 67 0.000000000000006 32..90 14..76
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..303 303  
join(1..303)


exon

Literature and cross-references EgrPrx[P]190
DNA ref. GenBank:   AUSX01019197.1 (110496..110798)
Protein sequence: EgrPrx[P]190
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   100
PWM (Da):   %s   10771.48 Transmb domain:   %s   o15-37i77-99o
PI (pH):   %s   7.92
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

KKAGSTQTRG PGEEWPVYTF IGSGTTFAFL ALILYPSTDA SDAAGLSYDQ TCPNEEKLIR GVACWKILKA PNTPAGVLRI FFHGCFVWAC VVYIPFS*IV L 

Retrieve as FASTA  
Remarks Pseudogene sequence from genomic. Short PS with stop in frame.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AAGAAAGCTG GCTCGACTCA GACGAGAGGA CCGGGAGAAG AATGGCCAGT TTATACATTT ATCGGATCTG GAACGACCTT TGCGTTCCTG GCCTTGATCC TGTATCCCTC CACGGATGCA  TCTGATGCAG CGGGCCTCAG CTACGATCAG ACTTGCCCGA ATGAGGAGAA GTTAATCCGC GGCGTGGCGT GTTGGAAGAT TCTCAAAGCT CCGAACACAC CCGCTGGCGT TCTTCGCATC 
TTCTTCCACG GCTGCTTTGT CTGGGCGTGT GTAGTTTATA TACCTTTTAG CTAGATAGTC CTC 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AAGAAAGCTG GCTCGACTCA GACGAGAGGA CCGGGAGAAG AATGGCCAGT TTATACATTT ATCGGATCTG GAACGACCTT TGCGTTCCTG GCCTTGATCC TGTATCCCTC CACGGATGCA  TCTGATGCAG CGGGCCTCAG CTACGATCAG ACTTGCCCGA ATGAGGAGAA GTTAATCCGC GGCGTGGCGT GTTGGAAGAT TCTCAAAGCT CCGAACACAC CCGCTGGCGT TCTTCGCATC 
TTCTTCCACG GCTGCTTTGT CTGGGCGTGT GTAGTTTATA TACCTTTTAG CTAGATAGTC CTC 

Retrieve as FASTA