Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
308 |
PWM (Da): |
34850.7 |
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PI (pH):
| 8.45 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
PVFFIRDGKPNPKSHVQENWRILDVLAHHPESLGMFTLLFDDTGIPQDERNMTGSGVNTYALINKARKAHYVKFHWKQTCGVKSLLEEEAIRVGGSKHSLATRDLYDSIAAGNYLEWKLFVQIMDTDYKDKFDFDPLDVAKTWPKDILPPxMLVGRLVLNKNxxxxxAEN*QLAFCPSIVVPGVYYSDDKLLQVRIFPNYLQLPSNAPKCAHHYSHHEGFMNCLISLLQINYFPSRYDPVRHAERYPIPTAMLTGKREKGMIEKENNFKQPGERYRSRAPDRQEQFIC*WIDALSEPRMTHKIHSIWISY |
Retrieve as FASTA
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Remarks |
Pseudogene from NGS. 5' and PS are missing due to NNNN. |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CCCGTCTTCTTTATCCGTGATGGGAAACCAAACCCCAAATCCCACGTCCAGGAGAACTGGAGGATCCTAGACGTTCTCGCCCACCATCCGGAGAGCTTGGGCATGTTCACCCTCCTCTTT GATGATACTGGTATTCCACAAGATGAGAGGAACATGACGGGCTCTGGAGTTAACACCTACGCTTTGATCAACAAGGCCAGAAAAGCGCATTATGTGAAGTTTCACTGGAAACAAACTTGC GGGGTCAAGAGCTTACTGGAGGAAGAGGCGATTAGAGTCGGGGGATCCAAGCACAGCCTTGCGACTCGGGATCTTTATGATTCCATTGCTGCTGGAAACTATCTTGAATGGAAACTTTTC GTTCAGATCATGGATACTGATTATAAAGACAAATTTGACTTTGACCCGCTTGATGTGGCTAAGACCTGGCCCAAAGACATATTGCCCCCTANNATGCTAGTTGGCCGCTTGGTCTTGAAT AAGAACNNNNNNNNNNNNNTTGCTGAGAATTAACAGCTTGCATTTTGCCCTTCAATTGTGGTTCCTGGCGTCTACTACTCAGATGATAAGCTGCTCCAAGTTCGTATTTTCTNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNACCAAATTATCTTCAACTCCCTTCTAATGCTCCTAAATGCGCTCATCACTACAGTCACCACGAAGGTTTCATGAATTGCCATGCATAGGATGAAGAG GTAAGAATTTTCTTTGAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAACCAAGTTAGACATCACGCTCTCCTATAAGTATGAAGGCCTAGTGATGC ATTCTGACATGTCAATTGTGGATCCCAAAGTGGCGGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCCTTTGTGCCTGAAACATGCATGTTTACATATGTA GGAAATACCTTTCTGCTATCACGTAAAATGATTATCTGTTGAGCAAATGTTTAATTTCCCTTTTGCAGATAAACTATTTTCCTTCAAGGTATGATCCCGTTCGTCATGCGGAGAGATATC CCATTCCAACTGCTATGCTGACTGGAAAGCGTGAAAAAGGTATGTTTTGTAGGATCTCTTTTACTTGGATAGAGATTGATTGTCCTGAGGTGCTTTCATGGTGATATCCATGGGATATAC TCAACTTGTCCTAGATGATCAATTGAATTGCAGCGAGTGGTATGACTGATGTATGTGTGTTTGGATCTTGTTATCTTTTGTTTCTCCTGGCAGACCAACATTGAGAAAGAGAACAACTTC AAGCAGCCTGGAGAGAGATACCGATCAAGGGCGCCTGACAGGTATTCTTCAGTTGTGCATCTCCTGAAAATGGTTTGATTGTCTCATGTTTCTCAATAATCTGTCTCTATCTTTCTTTTC TCAGGCAAGAGCAGTTCATCTGCTGATGGATCGATGCTTTGTCTGAACCACGTATGACTCATAAGATCCACAGCATCTGGATTTCAT |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CCCGTCTTCTTTATCCGTGATGGGAAACCAAACCCCAAATCCCACGTCCAGGAGAACTGGAGGATCCTAGACGTTCTCGCCCACCATCCGGAGAGCTTGGGCATGTTCACCCTCCTCTTT GATGATACTGGTATTCCACAAGATGAGAGGAACATGACGGGCTCTGGAGTTAACACCTACGCTTTGATCAACAAGGCCAGAAAAGCGCATTATGTGAAGTTTCACTGGAAACAAACTTGC GGGGTCAAGAGCTTACTGGAGGAAGAGGCGATTAGAGTCGGGGGATCCAAGCACAGCCTTGCGACTCGGGATCTTTATGATTCCATTGCTGCTGGAAACTATCTTGAATGGAAACTTTTC GTTCAGATCATGGATACTGATTATAAAGACAAATTTGACTTTGACCCGCTTGATGTGGCTAAGACCTGGCCCAAAGACATATTGCCCCCTANNATGCTAGTTGGCCGCTTGGTCTTGAAT AAGAACNNNNNNNNNNNNNTTGCTGAGAATTAACAGCTTGCATTTTGCCCTTCAATTGTGGTTCCTGGCGTCTACTACTCAGATGATAAGCTGCTCCAAGTTCGTATTTNACCAAATTAT CTTCAACTCCCTTCTAATGCTCCTAAATGCGCTCATCACTACAGTCACCACGAAGGTTTCATGAAATGTTTAATTTCCCTTTTGCAGATAAACTATTTTCCTTCAAGGTATGATCCCGTT CGTCATGCGGAGAGATATCCCATTCCAACTGCTATGCTGACTGGAAAGCGTGAAAAAGGTAACATTGAGAAAGAGAACAACTTCAAGCAGCCTGGAGAGAGATACCGATCAAGGGCGCCT GACAGGCAAGAGCAGTTCATCTGCTGATGGATCGATGCTTTGTCTGAACCACGTATGACTCATAAGATCCACAGCATCTGGATTTCAT |
Retrieve as FASTA
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