Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
140 |
PWM (Da): |
15561.17 |
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PI (pH):
| 9.48 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
VPELERKGGV KLLSFSCDEV KSHKAWIKDI EAFTLNLVEP EEKDASGKQV PSRALHIVGP DKKIKLSFLY PTSMGRNMDE VARVLDSLQR AMKHKIATPC NWKPGDAVVI SLSISNEQAK
EMSPQGFKTA DLLSRKYYLR
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Retrieve as FASTA
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Remarks |
Pseudogene sequence from NGS. Two ends and PS are missing due to NNNN. join(1..102,540..626,831..1061) |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GTGCCGGAGC TCGAGCGGAA GGGGGGnGTG AAGCTCCTGA GCTTTTCCTG CGACGAGGTC AAGTCGCACA AGGCGTGGAT CAAGGACATA GAGGCCTTCA CTGTCCGCTA CTCTTCTCTC
TCACTCTGCC TATTAGACCT TTTCATCACT TGGCATACAT ATATACTGCA TGTCCTGTAT TAACTTGCCT GTTTTGATAT GGATGTTGGG TTTGATCTGA TTTGGGTGAT TGTATTGTTC
AAAAAGGAAA AGAAGGAGAA CTTATAGAAA TGTGTGGTAT TATGGCTTTT GTGCAATTTT CATTATTCCA ATTTCAAGCC AACAnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnC TCAACCTGGT CGAGCCAGAG GAGAAAGACG CTTCAGGGAA GCAAGTCCCT TCTAGAGCTC
TGCACATCGT CGGTCCTGAT AAGAAGGTAT ACATGCCCTT CTACCTTTTC CTTCTCCCGT TAATTAAACT TGTATCAAAT GAAACAAACT GCATAAACCA ATGCCATCTT ATGCATGTCT
GTTATATGTG TATTACTTAA AGTAGCATAA ACCATTTATC CCATTTAAAC AGAGCAGATG CAGCAGGACT CTGGATCATC TATTTTCACA ATATAACATA ATTTGTATTG ATCAAGCTGA
GTTTCCTGTA CCCCACGAGC ATGGGAAGGA ACATGGACGA GGTGGCGAGG GTGCTGGACT CCCTGCAGAG GGCGATGAAG CACAAGATCG CCACCCCATG CAACTGGAAG CCAGGGGACG
CGGTCGTCAT CTCGCTGTCC ATCTCCAACG AGCAGGCCAA GGAGATGTCC CCGCAGGGCT TCAAGACCGC CGATCTTCTG TCCAGGAAGT ATTACCTCCG C
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GTGCCGGAGC TCGAGCGGAA GGGGGGnGTG AAGCTCCTGA GCTTTTCCTG CGACGAGGTC AAGTCGCACA AGGCGTGGAT CAAGGACATA GAGGCCTTCA CTCTCAACCT GGTCGAGCCA
GAGGAGAAAG ACGCTTCAGG GAAGCAAGTC CCTTCTAGAG CTCTGCACAT CGTCGGTCCT GATAAGAAGA TCAAGCTGAG TTTCCTGTAC CCCACGAGCA TGGGAAGGAA CATGGACGAG
GTGGCGAGGG TGCTGGACTC CCTGCAGAGG GCGATGAAGC ACAAGATCGC CACCCCATGC AACTGGAAGC CAGGGGACGC GGTCGTCATC TCGCTGTCCA TCTCCAACGA GCAGGCCAAG
GAGATGTCCC CGCAGGGCTT CAAGACCGCC GATCTTCTGT CCAGGAAGTA TTACCTCCGC
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Retrieve as FASTA
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