Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
195 |
PWM (Da): |
18523.56 |
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PI (pH):
| 8.19 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MASLLAKRSSSSVLxxxxxxxxxxxxxxxxxxxxSAAPGVSLQKARSWDEGVSSKFATTPLKDIFEGKKVVIFGLPGAYTGVCSQQHVPSYKNNIDKFKAKGIDSVICVAVNDPYTMNGWAENLKAKxxIEFYGDFDASFHKSLDLTKDLSAALLGLRSERWSAYVEDGKVKALNVEEAPSDLKVSGAEVILGQI |
Retrieve as FASTA
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Remarks |
Partial sequence from NGS. Short fragment is missing due to NNNNN. |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCGTCGCTGCTCGCGAAGCGCTCGAGCTCCTCCGTCCTCGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCGCGGCGCCGGGC GTCTCCCTCCAGAAGGCTCGGAGCTGGGACGAGGGCGTGTCCTCCAAGTTCGCCACCACCCCTCTCAAGGATATCTTCGAGGTTGGTCTTCGATTTCTTGCTGATTGCTTCATTCGCAGT GGAAGTTCAGCTTCTGAATTTTTACTAATTTGCTTTGCCTGGGCTTCATTCGGACATGGGATTTCAGGGCAAGAAGGTGGTGATTTTCGGTCTCCCGGTGAGTGAACTCTCGGCTCTTTC ATGTCTGTAGTTTCGTGGGAAATAATCGAGCCCTTTTTGTCTTTGGGCAGTTGATTCATGGGTGTCGATTGCAGCAAGCAATGTCTTCCTTATTTAGTGCTAACTTAGCGGCAAAGATTG CTCTTTTTTTTCCGACATCTGAAATGGTTGAATAAGACAGAGGAGATGCGTCTGAATTGTCTAATGGGAATCGTTTCAATTATTCGTTTAATGGGTTGCTTTCATGTTCTCGCCTTATTG GTTGGTGTCATCGTGTGGAGGCTTGAATAGATCGATAGATTATGATATGCGCTAGACTTTGCCAATTGCCATGAGAGAGTCGTGTTATGCTCTTTGATAGCAAAAATAGAAATCTTTCCT TTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTTTGACGCTTCTATGAAGTATTGT CCCATTCTTCGAACATTTATTGTACTTGTGAAAAGGATAGGTGCTGGGTTCCTAGCGGAAACTTCAAAGGCACTGCAGTCCATAATATGAGATTGCATGCTAGTCCACCATGTTTAGGTT CTGTGGTTCACTTACTTCATGATCCTAGCTGCATCATTGACGAAAATTTGGACATAGAGGTGACTATTTAACCAACTTGTTATAACTTCCAACCAAAATGAAAGTAAAAAAGAAAAAACG ATTTGGATTTAGACAATTTTAAATAAGTTTCACCNNNNNNNNNNNNNNNNNNNNNNGTACTTTTTTATATCGAGGTGTTCAATACTAGATAAAAGTCAATCTAAAACACTAAAAGCAAAA AATAGAAATAAGAAGTTGAAAAACATGTAACCTTGAACAAAACTTGCACAACAAAGTTAGTATGTTTAGAGAAAACTTTGTTGTTGTCTGTTAATAATGTAGTTTGATGTGATGCCATAT TTAATCTTCCATCTTACCTCTTAAAGCATTTCTAGTTTTATATACACCATATTTCTATTTTTTTAATTTGTACCCAAGTCCTTGATGCTGAATTCATCTTGCATCTAATGCCCAAGAGAG ACTGCATATGTCAGTCTATGCAGTCTCTTCTCAATACCGTTGCATGTGTTTTCTCGGAATACATTATCCGGTTATAGTTCATGATGTGCATTATCTTGCCATTTTAACCTCGGAAACTGA GACATGTTAACTTTAAGAAGATTTGACATATTGAAGCTGTAGCTACTGCAGGTCAAATGATAAAGGATAGCAAGTTGATATTTAACAATTCTATACTGGNTTTCCTTCTTTCTCTTGGTG CTTTCTATTCAAGTTTTCATATTTGATGTCTCCCAGGGTGCATACACTGGAGTTTGTTCACAGCAGCATGTGCCTAGCTACAAGAATAATATCGATAAGTTTAAGGCTAAAGGCATAGAC TCTGTGATTTGTGTGGCTGTCAATGACCCCTACACCATGAATGGCTGGGCTGAAAATCTCAAAGCAAAANNNNNNGATGCTGTAAGTTACTAATTTTGAAACCCAATTCTTTGCTTCTAG AGATGAACTACTGTGTCTGCCTTACATATTTTCTTCATCCAAATATCCTTTTGGCGTCTTTTCTCTCTTAAATGAATTATGAACGGTTTTGGAATGTTTGAGTTGGGTGTTGAGTTCCTT GACTCATCTTTTTGATAATTTCTTGAGGAAAAATTTGTTGATTGTTGTGAGGATTTCTGGTATTGCCTCACATTTCTTCCTGCAACTTGTAGAACATCAATGCGAGGTTACTTTCTTTTG TTTTTATTTTCTTCAAGAGGATGACTCTCCTTTATGTCACAATGTTCCGTTTGCAAAACTGTAAATGCATGTTGTTAGGACATGCGGTGATCACAATCAGAGGTGAAATGGCAGTAGAGC AGCTAGAATACTTACCTCAGTTTTATTATTAGCGCCATCTTTAAAGAAAGTGTACTACTACAGAAGTTTTCTTGGGCAAAACAATCCATTTCCAGAGATGCAAATGAGGCTTCTTTTTTT AGAGTATGTGTGTGACACTGTGAAGGAATGTGGTTCATGTATGCACAACAAGCAAAGCTTGATTTTTACCTTGTTTGTGAACTTCTGTCATCTCTGCCTCCCCACATTTTAAAGTGAAAG AAGGTTCTGACATGAGCTTGTGCTTGTTTTTCTTAATCATAACAGATCGAATTCTATGGGGATTTTGATGCTAGCTTCCATAAGAGCTTGGACTTGACTAAAGATCTCTCAGCAGCTTTG CTTGGACTTCGCTCTGAAAGGTATGCCCTAGGCCCTAATAAGTTAATATTGGACATCAAACACCTCCTTGAATCTCCTTCCGTCATTTTTACCTTTGGACCATCACTTTATGGATGAAAT GCCTAATTAAATGATCAGTTTGTCCTTGGATCTACTCTTTTTTTTTGGGTAATCAAATGGTTGCTCTGGTGTAGATGGTCAGCTTATGTGGAGGACGGGAAAGTGAAGGCTCTCAATGTG GAAGAAGCTCCATCCGACCTCAAGGTTTCTGGTGCCGAGGTTATTCTGGGACAGATA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCGTCGCTGCTCGCGAAGCGCTCGAGCTCCTCCGTCCTCGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCGCGGCGCCGGGC GTCTCCCTCCAGAAGGCTCGGAGCTGGGACGAGGGCGTGTCCTCCAAGTTCGCCACCACCCCTCTCAAGGATATCTTCGAGGGCAAGAAGGTGGTGATTTTCGGTCTCCCGGGTGCATAC ACTGGAGTTTGTTCACAGCAGCATGTGCCTAGCTACAAGAATAATATCGATAAGTTTAAGGCTAAAGGCATAGACTCTGTGATTTGTGTGGCTGTCAATGACCCCTACACCATGAATGGC TGGGCTGAAAATCTCAAAGCAAAANNNNNNATCGAATTCTATGGGGATTTTGATGCTAGCTTCCATAAGAGCTTGGACTTGACTAAAGATCTCTCAGCAGCTTTGCTTGGACTTCGCTCT GAAAGATGGTCAGCTTATGTGGAGGACGGGAAAGTGAAGGCTCTCAATGTGGAAGAAGCTCCATCCGACCTCAAGGTTTCTGGTGCCGAGGTTATTCTGGGACAGATA |
Retrieve as FASTA
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