Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
223 |
| PWM (Da): |
24361.48 |
|
| PI (pH): |
9.84 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASAPFSPFP TSLWSPAALR VPSSVRSSLG SCNSAFLVNG LSSSSLQSSS RLSFSSRSSG VYARAATEKT LYDFSVKDID RNDVSLSKFK GKVLLIVNVA SKGLTTSNYK ELSHVYEKYK
TQGFEILAFP CNQFGGQEPG SNPEIKQFAC TRFKAEFPIF DKVDVNGPGT APVYQFLKSS AGGFLGELVK WNFEKFLVDK NGKVVERYPP TTSPFQIEVR FLS
|
Retrieve as FASTA
|
|
| Remarks |
Complete sequence from NGS. |
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCTCGG CCCCTTTTTC GGnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnCC CTTTCCGACC TCCCTTTGGT CGCCGGCCGC TCTTCGCGTG
CCGTCATCGG TTCGATCCTC GCTCGGTTCG TGTAATTCGG CTTTTCTCGT TAATGGGTTG TCGTCGTCGT CCCTTCAGAG TTCGTCGCGG CTCAGCTTCA GTTCTCGCTC GTCGGGTGTT
TATGCTAGAG CTGCCACTGA GAAGACCCTC TACGATTTCA GCGTGAAGGT ATCGAATTTC TCTTCTGGGT GTAGCTGAAA TTGGTATTTG GAGAGATCTT CTTTTTTGGG TCGTCAGGGA
ACTTTGTAAT TCACTTAGAT ACGCTGTTTT TATGTATTTA TTTATCTTCG GTAGAATCAA GCAATTCTGA TGGCTTGCCC AAGCTACTTT GGAAATTAGA AAAAAAATAT ATCTTAATTG
TCTCAGCCGC CACACTGTTT TTTGCATCTT CTCTGTTTTA TTGTTACTTT TGGATGACGA GGAAGCACAT TTTAGCTACT TAACATTGGT GCTTCCAATT TGGACTAAAA GAAATCAAGC
TGGAGTTGAG GTCGCTTATT TGCTCTTTGT TCATGAATTG AACTAATTTG CAAATTCTCC ACGGTATGCA AATCCTTAGA ATTAAGATTC ATGCTGTTGT GGCTAAAAAT TCTTCGTTGT
TTTGGCACCT GCTATGTTTC GGTAATTTAT GTGGACATTA TTATACTATT CATTTTTCGG TTTACATACT GAATTTTGGG TAAAGCTGCT TTATTCATGA TAATTGCTAA TTGCTGCACA
CATTTTTCTT CATGGTTCAG GACATTGATA GGAATGATGT TTCATTGAGC AAATTCAAGG GAAAAGTCTT ATTAATTGTG AACGTAGCTT CGAAATGGTA ATTGCTTTAT CTCCTTCAGT
TGTCTGATTT AATTTATCAG ATTCACAGTC TCATTGAAGA ATTTTCTTGT GATTCAGTGG TTTAACGACA TCAAACTACA AGGAGCTCTC GCACGTATAT GAGAAGTACA AGACTCAAGG
TGAGATGAGA TTGTGGGGAG AGTTATAGAA TTCCTTAAAA GCTTCTCCTG TTTGAAGTTA GACTACTATC TTTGAGCTAG GAGGGATCAT TAATTTTTAA ATATAGTAGA TGAAATCATG
ATTCAGCAAA GGATGTGAAT CACCTTATTA TATCAGTGTC TTTTTCCAAT CATCGGAAAT GTTCAAGTTC TCAAGACCAT CTAATTAGGA GCTGAATTTC CCTTAACAAC AAGTCACGTC
GATCATTATG CTTCTCACTT ATAGTTTTTT TAATGATATG GGCTCCAACC AAAATTTAAT CTTCTCAAGC AAGCTTTGTT TAGTTTGCCC TGTGGTACTG GGTCTTACAC AGATTGCTAA
AGGGATTGTC CAATGGTCTT TGCTGCGGTT GAGTGTAACA GTGTGCTAGA AATCAGTTGT CCTTTATTTT TCCGTGGGAC TTTTATCAGT GTTTTTTCCA GTCCATTTTC AGGTGTTATA
CAGTTAGAGA TGCTTCCTTT GTGTGTGTGT GTACGAGGGA GAGAGAGAGA GAGAGTAGTA TATCCTGGAT GGATGGATGA ATGGATGGGG TGATAGGGGT AGAGAAAGAG AGATGTACCT
CCACTGATGA AAAGGAAGGG TTCTTTGTTT GGATGCAAGG AGAGAGACAT AGAGAGGGAG AGGCCTATTG CCTCTACCGC AAGGGTGGGA TGGCTGTTTC TTTGCTGGGA TGGAAACAGT
GGGAGACCTC CACTGATGAA AGGAAAGGAG TTTTTTTTTT TTTTTTTTTT TGGTGGGGGG GGGGGGGGGG AGCTATATAT TTTGCTATAT CCAAGAGACA GGAAGAGATC CACTTCTTAA
TTGCCTCTAC TGGAAGGGTG GGATGGCTGT TTCTTTGCTG GGATGGAAAG AGTGGGAGAC CTCTTTCCTC TGATCTAATG TATAGCTTGA ATCTTCTATG CAGATTTGGA TTTGGTTAGT
CCTCTTTCTA TATCTTTAAA ATTGATAAGA AACACCTTGG GCTGTCCATG TTACAGGTTT TGAAATTCTG GCTTTTCCTT GTAATCAATT TGGTGGCCAG GAGCCTGGTT CAAATCCTGA
GATTAAACAA TTTGCTTGTA CAAGGTTTAA AGCAGAGTTT CCGATTTTTG ATAAGGTTTG ACTTCCACAC ATACATTCTT TCCTCTATTT TAAGTGATGG CTGGAATGAA CAACTGAGCT
CAAGTCTGTT GGAAACAGGT TGATGTTAAT GGACCAGGTA CAGCTCCTGT GTATCAGTTT CTGAAATCGA GTGCAGGAGG TTTTTTGGGT GAACTGGTCA AGTGGAACTT TGAGAAGTTT
CTGGTTGACA AAAATGGCAA AGTTGTGGAG AGATATCCTC CAACAACGTC TCCTTTTCAA ATAGAGGTAC GTTTTTTAAG C
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCTCGG CCCCTTTTTC GCCCTTTCCG ACCTCCCTTT GGTCGCCGGC CGCTCTTCGC GTGCCGTCAT CGGTTCGATC CTCGCTCGGT TCGTGTAATT CGGCTTTTCT CGTTAATGGG
TTGTCGTCGT CGTCCCTTCA GAGTTCGTCG CGGCTCAGCT TCAGTTCTCG CTCGTCGGGT GTTTATGCTA GAGCTGCCAC TGAGAAGACC CTCTACGATT TCAGCGTGAA GGACATTGAT
AGGAATGATG TTTCATTGAG CAAATTCAAG GGAAAAGTCT TATTAATTGT GAACGTAGCT TCGAAAGGTT TAACGACATC AAACTACAAG GAGCTCTCGC ACGTATATGA GAAGTACAAG
ACTCAAGGTT TTGAAATTCT GGCTTTTCCT TGTAATCAAT TTGGTGGCCA GGAGCCTGGT TCAAATCCTG AGATTAAACA ATTTGCTTGT ACAAGGTTTA AAGCAGAGTT TCCGATTTTT
GATAAGGTTG ATGTTAATGG ACCAGGTACA GCTCCTGTGT ATCAGTTTCT GAAATCGAGT GCAGGAGGTT TTTTGGGTGA ACTGGTCAAG TGGAACTTTG AGAAGTTTCT GGTTGACAAA
AATGGCAAAG TTGTGGAGAG ATATCCTCCA ACAACGTCTC CTTTTCAAAT AGAGGTACGT TTTTTAAGC
|
Retrieve as FASTA
|
|
