Sequence Properties
first value : protein
second value (mature protein)
|
Length (aa):  |
170 |
| PWM (Da): |
19197.86 |
|
| PI (pH):
| 8.44 |
|
Sequence 314
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MGAAQSADEKSLHQFVVKDSKGNEVNLSAYEGKVLLVVNVASKGFTEQNYTQLAELHNRYKDKGFEILAFPCNQFLRQEPDTSQEVEDFACNRYKVEFPIFQVCVNGQETAPLYKYLKARKTGFLGSRIKWNFTKFLVDKEGRVISRYGTITPPLAIEVEDIQKALGMA* |
Retrieve as FASTA
|
|
| Remarks |
Complete sequence from NGS. |
DNA ►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGGTGCCGCCCAATCCGCGGACGAGAAATCCCTCCACCAGTTCGTCGTCAAGGTGGGCGTGTCGCTGCGCGAATCGTTCGCGAATCTCTCTTTCACGGGCTCGAAATTTACGTGGAAT
CGCGATGTTTTGATGTTAATGCTGATGCTGATGATGATGATGATGATGATGATGCAGGACAGCAAGGGCAATGAGGTGAATCTCAGTGCTTACGAAGGGAAGGTTCTTCTCGTCGTGAAC
GTTGCTTCCAAATGGTCTCTCTCACCCACCTCTCTCTTCTCATCAATTTTCTTCCTTTTTTTTTTTAGTGATGCGTTCGCTCTCAAACTAACAAGATTGATCTGTGGGTGTTTTTGGGTT
TGAAACAGTGGGTTCACCGAACAGAACTACACGCAGCTCGCTGAACTTCACAATAGGTACAAGGATAAAGGTCGGTTCTTTCGCCATTTTCTGTTCGGTTGCATTTTGTTGCATTCATGG
ATGTCGTCTTTTGTTATAATGGGTATGTTTCCGTGGTGATTATCATGGGAATTCCTACATTTTTCGACCGTGCAATGGAAGTAAGTATGGTGATGGGTGACTAGCACTATCAGTTGAGCT
TGTAAGTGGGGAAAGAAAACCATAGAAAGAAATACTGTATGTTTATGCCCCAAAAAATAGGAAAAATGCAAAATCAACCAGTGTTGGGGTACTCAAACATCTTCATGAGAAGCTAAATAG
CCTGGTGCTGTAAATGTTGGCCAAGTGATGCATAAATTGTCTTTATACTGCTTTTGTCCGAGGTATACTGTCCGATAAGATCATGAGGATGAATCGAGTCGAACCGAATTTTGTCTTCTA
CATTTATTAACCTACTGCTTTTTCCAATTTCTTTTTGTAACTGCTCCAATGCTTGATGATGCANNACTCTGCCTTGGCATCTTTGCTGGGGTTGCGGTCACTTCTAGGGGGTTGGCCATG
CATGCAAGTAAGAATCAGATAACTTGGGATGATCGAGTCAACCCAATTAATTGCAGATGCCAATTTTGAGCTTCATTTCCTTCTGGAAATCCCTATTCATTGTCAATCTGCAGAGCACTT
GTTCTTCATCTAATGTTGCAATAATCTCTTTGCTTTGTTCATCGTCTGTTTGGAAATTTGTGAACATTCGTAATAATTTGTCCCTCATGCTGTGCATTGCCATGGAAAGTTCTTTCCACT
GGAAATTTTTAAATAGAGAGTAGTCATTTTCTATATTGATTATTCCNNNNNNNNNNTTTAACATGCACTGCCGACCTTTCCTTCTTAGCCCCTCCCAAGATGAGTTTAATGAGTTTGAAA
TTGAAGGGAATGGCTGCTCCTGGGTTTTTCTCAGGATTCGAAATCTTGGCATTTCCATGCAACCAATTTCTCAGACAAGAGCCAGACACTAGCCAGGAGGTGGAAGATTTTGCTTGTAAC
AGATACAAAGTCGAATTTCCAATTTTCCAGAAGGTATGCTTTTTAGCTGCTCTCTCGCAACTGTTTAGCTTTTCAGATTGATCATTTGAATTGTTATTTTATCAACTAGGTCCATTTCTT
TGTATGTTCCCCTCCTCTTGTATGTTTCTGCCAGGCAGTTATATAGATTTCCAAGATCTCTTCTTTCTTTTCGGCTCTAATTGGTTGCCGTGGCCTATGACTGAACTGATGCTTTTGTCT
CTCAATAATTACTTCTTTTTGTTGCTTCTCCGCAGGGTGCAAACTCTACGAAATCATGACTTATCTATTGTGGTCTTTGATGTTTATCAATGGTTAATAAGTGGGTCGAAATGTTTGTAG
TCATAGGACTTGTGGCCATTTTAGTTGGAATTCTGGATACCATTGTGCCCTGCTCATTTCTTTATCCCATTTGGGTTTTTTTTGGTTGTATAACATCATCAAGACTCGTGGGAATATGTT
TCATTAAAACAACCCCCCCACCCCCCAAATAAGAAATTAGAAAATGGTCGCTCCAAACCTGTGAAGCATACCTGTTACCTGCTTTGAAGTTCACACGGTTTGGTAGCCTTTTAATACTTG
CTGGATAGTTCTCTCCTCTGAGTTCCCTGAATTATATAAATATGAGTTATGCAGTAGCATTATTAATTTGTCTGGAAGTGTACATGCTTTGATCTCGTTCTTTTGTCACATCGTATCAAG
ACTGGTTAAAATGTTGAACAAGCTTTATCTAATAGGTCTGGCCATTCTTCAAGTTGATTCAACCGTCATTTTAGTAGTCAAGAGTTTTGTCATTTCATTTTGCAATCAGCTGTGAAAAAT
GTTTCAAGAAGTAATTACAGAAGGATTCTTTTTCTTGGACTCTTTAAGGAAAATCTCTCCGTAGAAGGTTAAGAGGTTTTATACCTTGACTGGAGGTTTGGATCACGAGGTACGTAGAAA
ATCAAATTGTTAAGAGTTCTTAAACCTTTACTGGAGGTTATGATAATGAGAATCATAGAAGATTCGATTGTTCTATACCTTCGAATTTCTTTTTACTTACTGAAAATCATCAAGTGTACT
GGGACATTGCACATATGCTTGTTATTCTTGTCTTTCATCAGTACTGTCTCTACACTGGGCAAATTATGTGGAGGGAGGAAATAAGGATCAAACCCAAGACATAATTCTTGATATGAGTTG
GTCACCGCTGGCTGGAAAATTTGTTCTGCATCTTGTACCTGTAATTTTTAGCCAGAATTAACATTGAAATGGCAGAAAGAAAAGGTGAAAGACAAACTGCCAGAGAGGATAAGGAACAAT
TAGATTAACCAAAATATAGAAGGCTTCTGGCTATAAAGTATTGAGGAGAAGTTGCAATACTGGTGTCCTTTCTGTAACACATCCAAAACCGTCTGGCTTCACAACTAAATTTAGAGGATT
ACCCAAATGCATTACCCAAACTTGAAGTAAACATATCCAAAATTGAGTAAACACATTATTAACACATTCTTCTTTGAAAAGATCCGTTGTGTAAGCCCCACGGCTTGTACATTGATTTAC
ACAACTTATCTTCATTTGTTTCCATATCCACATTTTATTCCATCTGGTGGTATGGCCAAGTCAACTGAGGATTCAGATGACATTTTAGAAAGTCTCTAGGAGAAATACTGTGAATTTTTT
TGCTTGGACTGCAAGTTTTCAATGATTACAATTTTCCTTGTTGGTGAAGTTATTTACAAAGAAGCCTGTAACCTGATTTCCATCAGGATAGTCCATCTGTTTTCTTTGTTTATTCAGCAA
TTATTTTTTAGTTGAGAATACTACCCAAACACATCATCAGTCTTCTGTCACTACCAGTAAAACTCAGGCGATCTTTTGGAAAATTATTAGAGAAGAATAATTCGAAAACATTTCATAGGT
TTGCAATTCTCAGATTCTTTTCAGGGTATGTTCTGTAGAAGAAGATCATAACTTGATCTCTCAGATAAATTCAGCCAGTACTTGACTTCTCACATGAAGAGCGTGGTTTGTTAGTATGTT
TGGCAATGTAGTTGTAATGAGGAAAATGCTTCACACGTTTGGCTTCTCATATTATTAAAGGCTGTACAACTCCCGGTGGTCTAAGATTCACAATCTGCCTCTTAAGGATTGTGGCCGCTG
GGCCTACCCTTATCTTGGGACAAGTCACATCTGATTGCATTATGAGTGTTTGTCGGGAGATTTTTCTAGTTGTTGATAGAAAACTCAAAATTACCTATTTTTAAGAACTATATCGACACA
TATTTACTACTTTATGATTTCTTGGACACTTTTCCTTGTACTCCACATTGCACAGCTCATGATAGATGTAATAGCTCTGTGGGTTTATATACCATAAATATTGGTTATCTCATACAATTT
GTTTGCTCATTTCGTATGACCAGTCGATTTATTTGAAGTTTTCAGTAGGTGCCTGTGGTTGTAGGTTTGCGTCAATGGGCAAGAAACAGCGCCCCTCTACAAATACCTCAAAGCACGTAA
AACTGGATTTTTGGGTTCAAGAATAAAATGGAACTTCACCAAGTTTTTAGTAGACAAGGAAGGGCGAGTCATCAGCCGCTACGGAACAATCACACCTCCACTAGCCATCGAGGTAGCCGA
CAGTCTGTTCTGGCCCTCAAGTGCTCACTTCTCTGAACCACCCATTTCACTTAGCTTTGCAAGATACTTTTCCTAGTTGTTCGTTGACATTCATGGATATTTTCTATGCAGGAAGACATC
CAGAAAGCATTGGGAATGGCATGA |
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGGTGCCGCCCAATCCGCGGACGAGAAATCCCTCCACCAGTTCGTCGTCAAGGACAGCAAGGGCAATGAGGTGAATCTCAGTGCTTACGAAGGGAAGGTTCTTCTCGTCGTGAACGTT
GCTTCCAAAGGGTTCACCGAACAGAACTACACGCAGCTCGCTGAACTTCACAATAGGTACAAGGATAAAGGATTCGAAATCTTGGCATTTCCATGCAACCAATTTCTCAGACAAGAGCCA
GACACTAGCCAGGAGGTGGAAGATTTTGCTTGTAACAGATACAAAGTCGAATTTCCAATTTTCCAGAAGGTTTGCGTCAATGGGCAAGAAACAGCGCCCCTCTACAAATACCTCAAAGCA
CGTAAAACTGGATTTTTGGGTTCAAGAATAAAATGGAACTTCACCAAGTTTTTAGTAGACAAGGAAGGGCGAGTCATCAGCCGCTACGGAACAATCACACCTCCACTAGCCATCGAGGTA
GAAGACATCCAGAAAGCATTGGGAATGGCATGA |
Retrieve as FASTA
|
|
