1. Browse the Database
  2. View Redoxidase
Entry information : XparCcP
Entry ID 11125
Creation 2012-06-06 (Christophe Dunand)
Last sequence changes 2012-06-06 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-06-06 (Christophe Dunand)
Peroxidase information: XparCcP
Name XparCcP
Class Cytochrome C peroxidase    [Orthogroup: CcP001]
Taxonomy Eukaryota Fungi Ascomycota Lecanoromycetes Teloschistaceae Xanthoria
Organism Xanthoria parietina    [TaxId: 107463 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value XparCcP
start..stop		 S start..stop
CgrayCcP01 573 0 1..369 1..371
AderCcP02 527 0 1..372 1..375
XhevCcP01 522 0 1..372 1..369
MbicCcP02 513 0 1..372 1..373
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2986716..2987125 408 N° 2 2986539..2986660 120 N° 3 2986123..2986478 354 N° 4 2985825..2986055 229
complement(join(2985825..2986055,2986123..2986478,2986539..2986660,2986716..2987 125))


exon

Literature and cross-references XparCcP
DNA ref. JGI genome:   scaffold_1 (2987125..2985825)
Cluster/Prediction ref. JGI gene:   37801
Protein sequence: XparCcP
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   372
PWM (Da):   %s   41198.36 Transmb domain:   %s   i9-31o
PI (pH):   %s   8.53
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MTSVARACTRVASSRTFTSPTAASSTTRRACARQTFQNSSRRGYASGPNSASSRTPYLIGALALAGAGGAYFYLNNGSLLQAKEGSAGETRGVFTPTKEDYQKVYNLIASRLEEKDDYDD
GSYGPVIVRLAWHCSGTYDKLTNTGGSNGATMRFAPEGDHGANAGLKAARDFLDPVKQQFPWITYSDLWTLAGVCAIQEMQGPVIPWRPGRADRDVSMCTPDGRLPDGAKEQSHLRAIFG
RMGFDDREIVALSGAHAIGRCHTDRSGFDGPWSFSPTVVTNDYYKLLLNEKWNFRKWDGPKQYQDLASKSLMMLPTDMALIQDKEFKKHVDRYAKDNDVFFQDFRDVLVKLLELGVPFQS
KPEDRMELKPTS*

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACCTCCGTAGCTCGCGCCTGTACCCGCGTTGCCTCATCCAGGACCTTCACGTCCCCAACAGCAGCCTCCTCGACCACTCGTCGCGCTTGTGCACGCCAGACCTTCCAAAATTCCTCA
CGCCGAGGTTACGCTTCCGGTCCGAACAGTGCCTCTTCCAGAACTCCCTATCTCATCGGCGCCCTTGCGCTCGCCGGTGCCGGCGGAGCTTACTTTTATCTTAACAATGGATCCTTGTTG
CAGGCCAAAGAAGGAAGCGCCGGGGAGACCCGTGGCGTCTTCACTCCTACCAAAGAAGACTACCAGAAGGTCTACAATCTCATCGCTTCCCGTTTGGAAGAGAAGGATGATTATGATGAC
GGAAGCTACGGTCCCGTTATTGTCCGATTAGCCTGGCATTGTAGCGGAACGTAAGTCGGACAGCTTTAGATATGCAAGCGGACATCGACGCTAATTGCCTCACAGTTTTACGACAAGTTG
ACGAATACCGGAGGTTCCAACGGCGCCACCATGCGATTCGCCCCCGAAGGAGACCACGGCGCCAATGCTGGGTTGAAAGCAGCCCGTGATTTCCTCGACCCTGTCAAACGTGAGTAGTCG
CAAGAAACCTCTCAGCAACATGTGCCGGCGGTTGACAATACTGGGGTAGAAAACAATTCCCATGGATAACCTATTCGGACCTGTGGACACTAGCAGGCGTTTGTGCGATCCAAGAGATGC
AGGGGCCCGTGATCCCCTGGCGACCCGGCCGAGCCGACCGAGACGTCTCCATGTGCACGCCGGACGGACGTCTCCCGGACGGCGCCAAAGAACAATCACATCTGCGCGCCATCTTCGGTC
GCATGGGTTTCGACGACCGTGAGATCGTGGCGCTCAGCGGCGCACATGCTATCGGTCGATGCCACACCGATCGAAGTGGATTCGACGGGCCATGGAGCTTCAGTCCCACCGTCGTCACAA
ACGACTACTACAAACTTCTGTTGAACGAGAAATGGAATTTCCGAAAGGTGTGTTGAAATTCGCCCGATCCGATCCGAACCGAACATGGGCCATACTAACACCTCAACCCCACAGTGTGGG
ACGGCCCCAAACAATACCAAGACCTGGCCAGCAAATCCCTCATGATGCTCCCGACCGACATGGCCCTCATCCAGGACAAGGAATTCAAAAAGCACGTCGACCGCTACGCCAAGGACAACG
ATGTCTTCTTCCAAGATTTCCGCGACGTCCTGGTCAAGCTCCTGGAACTCGGGGTCCCCTTCCAAAGCAAGCCGGAAGACCGGATGGAGCTGAAGCCGACCAGCTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACCTCCGTAGCTCGCGCCTGTACCCGCGTTGCCTCATCCAGGACCTTCACGTCCCCAACAGCAGCCTCCTCGACCACTCGTCGCGCTTGTGCACGCCAGACCTTCCAAAATTCCTCA
CGCCGAGGTTACGCTTCCGGTCCGAACAGTGCCTCTTCCAGAACTCCCTATCTCATCGGCGCCCTTGCGCTCGCCGGTGCCGGCGGAGCTTACTTTTATCTTAACAATGGATCCTTGTTG
CAGGCCAAAGAAGGAAGCGCCGGGGAGACCCGTGGCGTCTTCACTCCTACCAAAGAAGACTACCAGAAGGTCTACAATCTCATCGCTTCCCGTTTGGAAGAGAAGGATGATTATGATGAC
GGAAGCTACGGTCCCGTTATTGTCCGATTAGCCTGGCATTGTAGCGGAACTTACGACAAGTTGACGAATACCGGAGGTTCCAACGGCGCCACCATGCGATTCGCCCCCGAAGGAGACCAC
GGCGCCAATGCTGGGTTGAAAGCAGCCCGTGATTTCCTCGACCCTGTCAAACAACAATTCCCATGGATAACCTATTCGGACCTGTGGACACTAGCAGGCGTTTGTGCGATCCAAGAGATG
CAGGGGCCCGTGATCCCCTGGCGACCCGGCCGAGCCGACCGAGACGTCTCCATGTGCACGCCGGACGGACGTCTCCCGGACGGCGCCAAAGAACAATCACATCTGCGCGCCATCTTCGGT
CGCATGGGTTTCGACGACCGTGAGATCGTGGCGCTCAGCGGCGCACATGCTATCGGTCGATGCCACACCGATCGAAGTGGATTCGACGGGCCATGGAGCTTCAGTCCCACCGTCGTCACA
AACGACTACTACAAACTTCTGTTGAACGAGAAATGGAATTTCCGAAAGTGGGACGGCCCCAAACAATACCAAGACCTGGCCAGCAAATCCCTCATGATGCTCCCGACCGACATGGCCCTC
ATCCAGGACAAGGAATTCAAAAAGCACGTCGACCGCTACGCCAAGGACAACGATGTCTTCTTCCAAGATTTCCGCGACGTCCTGGTCAAGCTCCTGGAACTCGGGGTCCCCTTCCAAAGC
AAGCCGGAAGACCGGATGGAGCTGAAGCCGACCAGCTAA

Retrieve as FASTA