Entry information : SAspCcP
Entry ID 11128
Creation 2012-06-06 (Christophe Dunand)
Last sequence changes 2012-06-06 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-06-06 (Christophe Dunand)
Peroxidase information: SAspCcP
Name SAspCcP
Class Cytochrome C peroxidase    [Orthogroup: CcP004]
Taxonomy Fungi/Metazoa; Choanoflagellida; Choanoflagellida; Choanoflagellida
Organism Salpingoeca sp. (Salpingoeca rosetta)    [TaxId: 946362 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SAspCcP
start..stop
S start..stop
MbrCcP 392 1.03e-138 63..322 1..266
CsubCcP01 352 9.6e-122 70..321 87..347
CspCcP06 339 2.11e-117 70..321 39..295
BemeCcP 336 2.09e-116 70..322 8..269
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '11128' 'complement(join(90768..91023,91224..91354,91640..91788,91999..92144,92432..92721))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 92432..92721 288 N° 2 91999..92144 144 N° 3 91640..91788 147 N° 4 91224..91354 129
N° 5 90768..91023 254  
complement(join(90768..91023,91224..91354,91640..91788,91999..92144,92432..92721 ))


exon

Literature and cross-references SAspCcP
DNA ref. GenBank:   GL832963.1 (92721..90768)
Protein sequence: SAspCcP
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   323
PWM (Da):   %s   35165.38  
PI (pH):   %s   5.44
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MFVRGSQRLLRAGRMMSTAARASATATSRTARVATLALGVGAAGAAAFAATPAAAECSWWNPLSWFYGVDYNQLRADIEDIADDNMAGPLLVRLAWHCSGTYDKKTGTGGSNGATMRFAP
ESSDAANAGLDKARNLLEPLKAKY
SVSYADLYTFAGVVAVESMGSPKVKWSPGRTDAADGKECPPNGRLPDATGASHLRDVFYRMGFNDREIVALAGAHTLGRCHIENSGFDGPWTRDPY
GLDNDFFRLLIEEKWTIRPNFQPLQYEDSSKELMMLPTDMALVWDPSFKQYVELYAKDGDLFLKDFAEAFGKLLELGVPRN

Retrieve as FASTA  
Remarks Complete sequence from genomic (4 introns).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTTGTTCGTGGTAGCCAGCGCCTGCTGCGCGCAGGCCGCATGATGTCGACGGCTGCTCGTGCCTCTGCGACAGCCACGTCCCGCACTGCCCGTGTGGCCACGCTGGCCCTCGGTGTC
GGTGCTGCCGGCGCCGCCGCCTTCGCCGCCACCCCTGCCGCCGCGGAGTGCTCCTGGTGGAACCCGCTGTCGTGGTTCTATGGCGTCGACTACAACCAGCTCCGCGCCGACATTGAGGAC
ATTGCCGACGACAACATGGCTGGCCCTCTCCTCGTTCGCCTCGCCTGGCA
GTGCGTACACACACACACACACTCCTCGCGCTTTGTTTTGATTTGTTTGTTTTGTGTTTTCATTGTTTTG
AATTCGTGGTGGCTGTCATTGTCCATCGTGTGTTTGTGTATCTGTAGCGTGTCGTGTGTGTTTAGTGTTGTGGAGTGGAGTGGAGTGTTGTGGAGTGTGTCTGTTTGTGTGCACTGATGT
CGGTATCGTTGCGTCATACGCGATCGCACACGCACACGCACACACACACACACACACTCTCTCTCTCTCACGTGCGTTTGCGTCCTCTCCACTGTAGTTTTGCTCTGGCACGTACGACAA
GAAGACCGGCACTGGCGGCAGCAACGGCGCCACCATGCGCTTTGCCCCCGAGTCCTCCGATGCTGCCAACGCTGGCCTCGACAAGGCCCGCAACCTCCTCGAGCCCCTCAAGGCCAAGTA
CCCCT
GTAAGTAGCTATGTGTGTGTATGCGTGTGTGTGTGTGTGCACAGTGTGATTGCTTGTTCTCTGCTCTCATGTTGTGTCGTCCATAACCTGCACTTTTATTCACTTCGCGCACGTA
TTCTCTTGACACTGCTCCCACCAGCTAGCTCACTTTCCCCTGCTGTTTGTTTGCGCAAACCCTTGTGGTGTGCCTGCTTCATTTGTTGTGGTCAGCCCCGTCTCCTACGCCGATCTGTAC
ACGTTTGCTGGTGTTGTTGCTGTTGAGAGCATGGGCAGCCCCAAGGTCAAGTGGTCCCCTGGCCGCACGGACGCTGCTGACGGCAAGGAATGCCCTCCCAACGGCCGCCTCCCTGATGCC
ACCCAA
GTGCGTGCATTTCGCTTGTTTGTATGTATGTGTGCGTGTGTGTGTGTGTGTGTGTGTTGTCTGTGTGCGTGTGCGTGTGTGTACGTGTTACCCGTGTGCGTACGTGTTGTCTGT
GTGCGTACGTGTTGTCCGTGTGCTTATCGGCCCCCTCCTGTCTGCTTGTAGCGTCTCGTGTCGCTTGCGTGCATGCATGCATTGTCACCCCCACCCCCCCCCCCCCCAACGCCGTATGAC
AACCCACCTCGCGCATCCCACTCACCCTTTGTTCCCATCTCCGACGATTAGGGGGCGCGTCCCACCTGCGCGATGTGTTCTACCGCATGGGCTTCAACGACCGCGAGATTGTCGCCCTCG
CCGGCGCCCACACCCTCGGCCGCTGCCACATCGAGAACTCCGGCTTTGACGGCCCATGGACCCG
GTACAACCCCCTTCGGTGTATGTGTGTGGGTATGGGTGAAGCGGTGTAGCGGTGTA
AGGTTGCATGTTACATGAAGCAGTGGCCCAAAAGCGCCTTCTTCGTTGCCACGCACCTACGCATCCACTCGCCACTCATCACCTCCCCCCCCCCCCCTTTTTTTTTCTTCTCTTGCCGTA
CCTTCTTTCTTGCTTGTTCTTCAGCGCGACCCATATGGCCTTGACAACGACTTCTTCCGCCTTCTGATTGAGGAGAAGTGGACGATCCGCCCCAACTTCCAGCCGCTGCAGTACGAGGAC
TCGAGCAAGGAGCTTATGATGCTTCCCACGGACATGGCCCTCGTCTGGGACCCCTCCTTCAAGCAGTATGTGGAGCTCTACGCAAAGGACGGCGACCTCTTTCTCAAGGACTTTGCCGAG
GCATTTGGCAAGCTTCTCGAGCTCGGCGTGCCCCGCAACTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTTGTTCGTGGTAGCCAGCGCCTGCTGCGCGCAGGCCGCATGATGTCGACGGCTGCTCGTGCCTCTGCGACAGCCACGTCCCGCACTGCCCGTGTGGCCACGCTGGCCCTCGGTGTC
GGTGCTGCCGGCGCCGCCGCCTTCGCCGCCACCCCTGCCGCCGCGGAGTGCTCCTGGTGGAACCCGCTGTCGTGGTTCTATGGCGTCGACTACAACCAGCTCCGCGCCGACATTGAGGAC
ATTGCCGACGACAACATGGCTGGCCCTCTCCTCGTTCGCCTCGCCTGGCA
TTGCTCTGGCACGTACGACAAGAAGACCGGCACTGGCGGCAGCAACGGCGCCACCATGCGCTTTGCCCCC
GAGTCCTCCGATGCTGCCAACGCTGGCCTCGACAAGGCCCGCAACCTCCTCGAGCCCCTCAAGGCCAAGTACCCCT
CCGTCTCCTACGCCGATCTGTACACGTTTGCTGGTGTTGTTGCT
GTTGAGAGCATGGGCAGCCCCAAGGTCAAGTGGTCCCCTGGCCGCACGGACGCTGCTGACGGCAAGGAATGCCCTCCCAACGGCCGCCTCCCTGATGCCACCCAA
GGCGCGTCCCACCTG
CGCGATGTGTTCTACCGCATGGGCTTCAACGACCGCGAGATTGTCGCCCTCGCCGGCGCCCACACCCTCGGCCGCTGCCACATCGAGAACTCCGGCTTTGACGGCCCATGGACCCG
CGAC
CCATATGGCCTTGACAACGACTTCTTCCGCCTTCTGATTGAGGAGAAGTGGACGATCCGCCCCAACTTCCAGCCGCTGCAGTACGAGGACTCGAGCAAGGAGCTTATGATGCTTCCCACG
GACATGGCCCTCGTCTGGGACCCCTCCTTCAAGCAGTATGTGGAGCTCTACGCAAAGGACGGCGACCTCTTTCTCAAGGACTTTGCCGAGGCATTTGGCAAGCTTCTCGAGCTCGGCGTG
CCCCGCAACTGA

Retrieve as FASTA