View Redoxidase 11145

Entry information : PmariAPx01

Entry ID	11145
Creation	2012-06-11 (Christophe Dunand)
Last sequence changes	2012-06-11 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2012-06-11 (Christophe Dunand)

Peroxidase information: PmariAPx01

Name

PmariAPx01

Class

Ascorbate peroxidase [Orthogroup: APx2002]

Taxonomy

Eukaryota Perkinsidae Perkinsus

Organism

Perkinsus marinus [TaxId: 31276 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	PmariAPx01 start..stop	S start..stop
PmariAPx02	524	0	5..297	38..329
GtAPx02	290	3.04e-97	23..297	80..364
BdiAPx05	283	2.35e-95	12..297	47..313
EsinAPx07	284	8.63e-95	4..289	49..311

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '11145' 'complement(join(62161..63054))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	62161..63054	892
complement(join(62161..63054))

Literature and cross-references PmariAPx01

DNA ref.	GenBank: GG685288.1 (63054..62161)
EST ref.	GenBank: EH062259.1 [5' end] EH070464.1 [3' end]

Protein sequence: PmariAPx01

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	297 (309)
PWM (Da):	32809.12 (33654.2)
PI (pH):	4.79 (9.62)	Peptide Signal:	cut: 21 range:21-329

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MVQSDPKQYA KDLHAMADDL TAMIDELNCD PIIVRFAWHD SGTYDKSLPW PECGGANGGI RFDAELKHEA NAGLAKGRRF LEPIKAKYPG VSWADTIQLA SACALKHCGG PDILPNMKFG RKDISGPEEC PPEGRLPSPD GAADHLRKIF YRMGFNDQEI VALSGGHTIG RAFKDRSGTV EEAAGRGTQY TNGSEVARLD GKEGIGMKGG RSWCRKWLKF DNEYFINIME DAKKDSDEDN
GLLVLKTDNA LVTDPFFREY VELYAEDNDK FLEDYEKAHI KLSELGSEFI VDGGIKM

Retrieve as FASTA

Remarks

Complete sequence from genomic (no intron) and ESTs.

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGGTACAGA GTGATCCCAA GCAATACGCC AAAGACCTCC ATGCCATGGC AGATGATCTC ACTGCCATGA TTGACGAGCT GAACTGTGAT CCCATCATTG TCCGTTTTGC TTGGCACGAC AGTGGGACTT ATGATAAGTC CCTCCCTTGG CCGGAGTGTG GTGGGGCCAA TGGTGGAATC AGATTTGATG CCGAACTCAA GCATGAGGCA AATGCTGGGT TGGCCAAAGG TCGAAGATTC CTCGAGCCCA TTAAGGCCAA GTACCCCGGT GTGTCTTGGG CCGATACCAT CCAGTTGGCA TCGGCATGCG CCTTGAAACA CTGTGGGGGG CCTGACATTC TCCCCAATAT GAAGTTCGGC AGGAAGGACA TCTCTGGTCC TGAGGAGTGT CCTCCCGAAG GGAGACTCCC CAGCCCTGAC GGCGCCGCCG ACCATTTGAG GAAGATCTTC TACCGTATGG GCTTCAATGA TCAGGAGATT GTCGCTCTTT CTGGTGGTCA TACTATCGGT AGGGCCTTCA AAGATCGTTC TGGCACGGTT GAGGAGGCTG CTGGACGCGG TACTCAATAC ACCAACGGCA GCGAGGTGGC TCGTCTTGAT GGAAAGGAGG GTATCGGTAT GAAGGGCGGC CGCTCTTGGT GCAGGAAATG GCTCAAGTTT GATAATGAGT ACTTCATCAA CATCATGGAG GATGCCAAAA AGGACTCCGA TGAGGACAAC GGCTTGCTGG TGCTGAAGAC CGATAACGCT CTTGTCACAG ATCCTTTCTT CAGAGAATAT GTTGAACTTT ATGCAGAGGA TAATGATAAG TTTTTAGAGG ACTATGAGAA GGCTCATATC
AAGCTGAGCG AGCTCGGTTC TGAGTTCATC GTAGATGGTG GCATCAAAAT GTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA