Sequence Properties
first value : protein
second value (mature protein)
|
Length (aa):  |
331 (309) |
| PWM (Da): |
36164.48 (33803.2) |
Transmb domain: |
i7-29o |
| PI (pH):
| 9.69 (9.81) |
Peptide Signal:
| cut: 23 range:23-331 |
|
Sequence 0
Send to BLAST
Send to Peroxiscan
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MTKSMNILLL ATLLAFAPLC LCSKSHGGYL YPQFYDRSCP KAGQIVKSIV AKAVAKEARM AASLVRLHFH DCFVKGCDAS ILLDSTGSII SEKRSNPNRN SARGFEVIDE IKSALEKECP
QTVSCADILA LSARDSSVLA GGPSWEVPLG RKDSRGASLS GSNNNIPAPN NTFQTILTKF KLQGLNIVDM VALSGSHTIG NARCTSFRQR LYNQTGNGLA DFTLDKTYAA KLRNRCPRSG
GDQNLFFMDF VSPTRFDNSY FKNLLASKGL LNSDEVLVTK NAESLELVKQ YAENNELFFQ QFAKSMIKMG NISPLTGSRG EIRKNCRKIN S
|
Retrieve as FASTA
|
|
| Remarks |
Complete sequence from genomic and 4 ESTs (5'end is missing). Incorrect prediction from MPGR (splicing error). |
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGACCAAGT CTATGAACAT TTTATTGCTG GCAACTCTCC TTGCCTTTGC ACCACTTTGT TTGTGTTCTA AGTCCCACGG TGGCTACCTT TACCCTCAGT TCTATGACAG ATCTTGCCCG
AAAGCAGGAC AAATTGTTAA GTCCATTGTT GCAAAAGCTG TTGCTAAAGA AGCCAGAATG GCTGCCTCTT TGGTCAGGCT CCATTTCCAT GACTGCTTTG TCAAGGTAAG GACTAAACCA
AGGAGTTATA AAGATTCATC TTTTAACTTT CTGACTTTTG TCTTGATGAT GATTTTTCTT AAGGGGTGCG ATGCCTCCAT ACTTCTAGAC AGCACTGGGA GTATAATCAG TGAGAAAAGA
TCAAATCCTA ACAGGAATTC AGCTCGTGGA TTCGAAGTGA TAGATGAAAT TAAATCTGCA TTAGAGAAAG AATGTCCTCA AACTGTGTCT TGTGCTGATA TCTTAGCCCT TTCTGCTAGA
GATTCTTCTG TTCTGGTAAC TAACAAGTTC TATAATATGT TTATCAAATG CAAAATGAAG ATGCTGCTAA GCAAAACTAA GAATAATTTC TTTATTATAT TATGCAGGCT GGTGGACCTA
GTTGGGAAGT TCCACTAGGA AGAAAAGACT CCAGAGGAGC TAGTTTAAGT GGCTCTAACA ACAACATTCC TGCTCCAAAT AACACTTTCC AAACCATCCT CACTAAGTTC AAGCTTCAAG
GCCTCAACAT TGTTGATATG GTTGCATTAT CTGGTAATAT CGGCTTTTTT TCTGGAAACC ATAAGTTTCT TCACATAATA ACAATGCATA ATGCATACAA GGACGGTACT AAAGGGGGCA
GAGGTGGGGT AAAGTTAAAT ATCATTTTTT GAAACAATAA TGATTTGAAA TTTACCTGCA GGAAGTCATA CAATAGGAAA TGCAAGATGC ACCAGCTTTA GGCAAAGGCT ATACAACCAA
ACTGGAAATG GATTAGCTGA CTTTACCTTG GACAAAACAT ATGCAGCAAA ATTAAGGAAC AGGTGCCCAA GATCCGGTGG AGATCAAAAC CTTTTCTTCA TGGACTTTGT TTCCCCAACA
AGATTTGATA ACAGCTACTT CAAGAACTTG CTGGCTTCAA AGGGACTATT AAACTCTGAT GAGGTTCTGG TGACCAAGAA TGCCGAGTCT TTGGAGCTGG TGAAACAATA CGCTGAGAAC
AATGAACTCT TCTTTCAGCA GTTTGCCAAG TCCATGATTA AGATGGGTAA CATTTCACCT TTGACGGGTT CCAGGGGAGA AATCAGGAAA AACTGCAGGA AGATCAACTC TTAA
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGACCAAGT CTATGAACAT TTTATTGCTG GCAACTCTCC TTGCCTTTGC ACCACTTTGT TTGTGTTCTA AGTCCCACGG TGGCTACCTT TACCCTCAGT TCTATGACAG ATCTTGCCCG
AAAGCAGGAC AAATTGTTAA GTCCATTGTT GCAAAAGCTG TTGCTAAAGA AGCCAGAATG GCTGCCTCTT TGGTCAGGCT CCATTTCCAT GACTGCTTTG TCAAGGGGTG CGATGCCTCC
ATACTTCTAG ACAGCACTGG GAGTATAATC AGTGAGAAAA GATCAAATCC TAACAGGAAT TCAGCTCGTG GATTCGAAGT GATAGATGAA ATTAAATCTG CATTAGAGAA AGAATGTCCT
CAAACTGTGT CTTGTGCTGA TATCTTAGCC CTTTCTGCTA GAGATTCTTC TGTTCTGGCT GGTGGACCTA GTTGGGAAGT TCCACTAGGA AGAAAAGACT CCAGAGGAGC TAGTTTAAGT
GGCTCTAACA ACAACATTCC TGCTCCAAAT AACACTTTCC AAACCATCCT CACTAAGTTC AAGCTTCAAG GCCTCAACAT TGTTGATATG GTTGCATTAT CTGGAAGTCA CACAATAGGA
AATGCAAGAT GCACCAGCTT TAGGCAAAGG CTATACAACC AAACTGGAAA TGGATTAGCT GACTTTACCT TGGACAAAAC ATATGCAGCA AAATTAAGGA ACAGGTGCCC AAGATCCGGT
GGAGATCAAA ACCTTTTCTT CATGGACTTT GTTTCCCCAA CAAGATTTGA TAACAGCTAC TTCAAGAACT TGCTGGCTTC AAAGGGACTA TTAAACTCTG ATGAGGTTCT GGTGACCAAG
AATGCCGAGT CTTTGGAGCT GGTGAAACAA TACGCTGAGA ACAATGAACT CTTCTTTCAG CAGTTTGCCA AGTCCATGAT TAAGATGGGT AACATTTCAC CTTTGACGGG TTCCAGGGGA
GAAATCAGGA AAAACTGCAG GAAGATCAAC TCTTAA
|
Retrieve as FASTA
|
|
cDNA►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ACTAAGCTTG TATGCATAAA TTAAAATTAC AAATCAAAGG GTAAACTAAT CATATACTAA CCATAACCTT TGCTTAACTA CTTTGATGAT AAGAAGATGA AGATATTGAT AACTCTTCAA
AAAGATTACC AACTCCACAT TACTTCCTTC CCTTGTCTAT AAATACCATA TTTCTTCTAC AACTTTAGCC ATAACAAATT CTTACCATTT CATCCAATCA AAAGTGCCAA CAAAAAATTG
TGAACAATGA CCAAGTCTAT GAACATTTTA TTGCTGGCAA CTCTCCTTGC CTTTGCACCA CTTTGTTTGT GTTCTAAGTC CCACGGTGGC TACCTTTACC CTCAGTTCTA TGACAGATCT
TGCCCGAAAG CAGGACAAAT TGTTAAGTCC ATTGTTGCAA AAGCTGTTGC TAAAGAAGCC AGAATGGCTG CCTCTTTGGT CAGGCTCCAT TTCCATGACT GCTTTGTCAA GGGGTGCGAT
GCCTCCATAC TTCTAGACAG CACTGGGAGT ATAATCAGTG AGAAAAGATC AAATCCTAAC AGGAATTCAG CTCGTGGATT CGAAGTGATA GATGAAATTA AATCTGCATT AGAGAAAGAA
TGTCCTCAAA CTGTGTCTTG TGCTGATATC TTAGCCCTTT CTGCTAGAGA TTCTTCTGTT CTGGCTGGTG GACCTAGTTG GGAAGTTCCA CTAGGAAGAA AAGACTCCAG AGGAGCTAGT
TTAAGTGGCT CTAACAACAA CATTCCTGCT CCAAATAACA CTTTCCAAAC CATCCTCACT AAGTTCAAGC TTCAAGGCCT CAACATTGTT GATATGGTTG CATTATCTGG AAGTCACACA
ATAGGAAATG CAAGATGCAC CAGCTTTAGG CAAAGGCTAT ACAACCAAAC TGGAAATGGA TTAGCTGACT TTACCTTGGA CAAAACATAT GCAGCAAAAT TAAGGAACAG GTGCCCAAGA
TCCGGTGGAG ATCAAAACCT TTTCTTCATG GACTTTGTTT CCCCAACAAG ATTTGATAAC AGCTACTTCA AGAACTTGCT GGCTTCAAAG GGACTATTAA ACTCTGATGA GGTTCTGGTG
ACCAAGAATG CCGAGTCTTT GGAGCTGGTG AAACAATACG CTGAGAACAA TGAACTCTTC TTTCAGCAGT TTGCCAAGTC CATGATTAAG ATGGGTAACA TTTCACCTTT GACGGGTTCC
AGGGGAGAAA TCAGGAAAAA CTGCAGGAAG ATCAACTCTT AAGAGTTATA AGACAACATG CTATAATGGC TGCTAAAATC AACCTATATA TTTATATTTC CCTACCATGA TTCCTTTTCT
GTATTGATTT GTCGACAATT ATTTCAGCTT GTATCCTATT ATTAATGAAA TTTTCCCATG ATTTGTTCTT ATCAAAAAAA GAAAAAAAAA GGCC
|
Retrieve as FASTA
|
|