Entry information : LcPrx01 (POD1)
Entry ID 11182
Creation 2012-06-29 (Christophe Dunand)
Last sequence changes 2012-06-29 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-06-29 (Christophe Dunand)
Peroxidase information: LcPrx01 (POD1)
Name (synonym) LcPrx01 (POD1)
Class Class III peroxidase    [Orthogroup: Prx042]
Taxonomy Eukaryota Viridiplantae Streptophyta Sapindaceae Litchi
Organism Litchi chinensis    [TaxId: 151069 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LcPrx01
start..stop
S start..stop
CclPrx48 523 0 1..317 1..319
CsPrx07 523 0 1..317 1..319
CppPrx06 522 0 2..317 1..317
PpePrx29 488 6e-176 1..317 1..318
Literature and cross-references LcPrx01 (POD1)
Literature Guo,Z.-X., Pan,T.-F., Wang,J.-B., Lin,L., Zhong,F.-L. and Chen,L.-R.cDNA cloning of peroxidase (POD) from litchi pericarp
Protein sequence: LcPrx01 (POD1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   318 (295)
PWM (Da):   %s   34210.62 (31774.4)  
PI (pH):   %s   9.88 (9.93) Peptide Signal:   %s   cut: 24 range:24-318
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAAGFYFFLL VLFAFGASLQ ANGQLCPNFY ESTCPQALSI VHKGVVAAIK NETRIGASLL RLHFHDCFVN GCDGSLLLDD TSTFVGEKTA VPNNISVRGF NVVDQIKAKL EKACPGVVSC  ADLLAIAARD SVVHLGGPSW KVRLGRRDST TASRALANTS IPPPTSNLSA LISSFSAQGL SLKDLVALSG SHTIGLARCT SFRGHVYNDT NIDSSFAQSL RRKCPRSGND NVLANLDRQT 
PFCFDKLYYD NLLKKKGLLH SDQQLFKGGS ADPFVKKYAN NTSAFFKDFA GAMVKMGNIK PLTGRAGQIR INCRKVNK 

Retrieve as FASTA  
Remarks Commplete sequence from mRNA.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAGCTG GTTTCTACTT CTTCCTACTT GTGCTATTTG CTTTTGGTGC TTCTCTTCAA GCCAATGGCC AACTCTGTCC AAACTTCTAC GAATCTACAT GCCCACAAGC ACTTTCTATA  GTTCATAAAG GAGTTGTGGC TGCTATAAAA AATGAAACAA GAATTGGTGC ATCTTTACTC CGTTTGCATT TCCATGACTG CTTTGTTAAC GGCTGCGATG GATCGCTACT TTTGGACGAC  ACATCCACCT TTGTTGGCGA AAAAACAGCT GTTCCAAACA ATATCTCAGT CAGAGGTTTC AATGTGGTTG ATCAAATTAA AGCTAAACTA GAGAAAGCAT GTCCTGGAGT GGTGTCCTGT  GCTGATCTTC TTGCTATTGC AGCTCGAGAT TCGGTTGTTC ATTTAGGAGG TCCTTCATGG AAAGTGAGGT TGGGAAGAAG AGATTCTACA ACTGCTAGCA GAGCTCTTGC GAACACCTCC  ATCCCTCCAC CCACATCTAA TTTAAGTGCT CTCATATCAA GCTTCTCCGC TCAGGGTCTC TCTTTAAAGG ACTTGGTTGC TCTTTCTGGT TCGCACACGA TAGGCCTGGC CAGATGCACA  TCATTTCGAG GGCACGTCTA CAATGATACC AATATAGACA GCTCCTTTGC CCAGTCATTG CGGCGAAAGT GCCCAAGATC TGGAAATGAC AATGTCCTGG CAAACCTCGA CCGCCAGACA  CCATTTTGTT TTGATAAATT ATATTACGAC AATTTGTTGA AGAAGAAGGG TCTTCTTCAT TCAGATCAAC AGCTCTTCAA GGGTGGTTCT GCTGATCCTT TCGTCAAAAA ATATGCCAAC 
AACACTTCTG CCTTTTTCAA GGACTTTGCC GGGGCTATGG TCAAGATGGG CAACATCAAA CCTCTTACAG GACGTGCTGG ACAGATCAGG ATCAATTGCA GAAAAGTCAA CAAATAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGTGATTTGA TAATACACAC ACAAAAATAA TCTTCCATGG CAGCTGGTTT CTACTTCTTC CTACTTGTGC TATTTGCTTT TGGTGCTTCT CTTCAAGCCA ATGGCCAACT CTGTCCAAAC  TTCTACGAAT CTACATGCCC ACAAGCACTT TCTATAGTTC ATAAAGGAGT TGTGGCTGCT ATAAAAAATG AAACAAGAAT TGGTGCATCT TTACTCCGTT TGCATTTCCA TGACTGCTTT  GTTAACGGCT GCGATGGATC GCTACTTTTG GACGACACAT CCACCTTTGT TGGCGAAAAA ACAGCTGTTC CAAACAATAT CTCAGTCAGA GGTTTCAATG TGGTTGATCA AATTAAAGCT  AAACTAGAGA AAGCATGTCC TGGAGTGGTG TCCTGTGCTG ATCTTCTTGC TATTGCAGCT CGAGATTCGG TTGTTCATTT AGGAGGTCCT TCATGGAAAG TGAGGTTGGG AAGAAGAGAT  TCTACAACTG CTAGCAGAGC TCTTGCGAAC ACCTCCATCC CTCCACCCAC ATCTAATTTA AGTGCTCTCA TATCAAGCTT CTCCGCTCAG GGTCTCTCTT TAAAGGACTT GGTTGCTCTT  TCTGGTTCGC ACACGATAGG CCTGGCCAGA TGCACATCAT TTCGAGGGCA CGTCTACAAT GATACCAATA TAGACAGCTC CTTTGCCCAG TCATTGCGGC GAAAGTGCCC AAGATCTGGA  AATGACAATG TCCTGGCAAA CCTCGACCGC CAGACACCAT TTTGTTTTGA TAAATTATAT TACGACAATT TGTTGAAGAA GAAGGGTCTT CTTCATTCAG ATCAACAGCT CTTCAAGGGT  GGTTCTGCTG ATCCTTTCGT CAAAAAATAT GCCAACAACA CTTCTGCCTT TTTCAAGGAC TTTGCCGGGG CTATGGTCAA GATGGGCAAC ATCAAACCTC TTACAGGACG TGCTGGACAG  ATCAGGATCA ATTGCAGAAA AGTCAACAAA TAATTATGTT ATATGTTATG TGCTTCATAT AATCATGTCA TGTGCTTCAT CTACTAGGAA TTTGTTGCAG AAAAGTCAAC AAATAGTTAT 
GTTATGTGCT CCATATAATT ATGCCATGTG TTTCATCTAA TAAGAATTTA TTGTAACTTT TTCTATTTGG TGTTATAAAA AAAAAAAAAA AAA 

Retrieve as FASTA