Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
237 |
PWM (Da): |
26759.46 |
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PI (pH):
| 7.22 |
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Sequence 284
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
VQRLIWAFTLFTNIIWWAPTMIKARYTYTPKPLGQLKLAERYYRAPAPGDMRTPCPGLNTLANHGIIHRNGKKINPIDLFHALRDYYSADFFTCFSLLSGALQVGLSDDGYTLDLGRIGLHNFIEHDASISRPDSGWGKQECPDMELVKKFCEFGRGEGEGMIGVKEIARFRVMRERECQRHNPQYELSGLHPFITRGEPALILDVFGDGYGTDIHVSTTIIETWMGKETFPAGYV |
Retrieve as FASTA
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Remarks |
Partial sequence from genomic (no intron). Incorrect prediction from JGI (23 first AA are missing in the prediction) |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GTTCAGCGCCTTATCTGGGCGTTCACGCTCTTCACGAACATCATCTGGTGGGCACCGACTATGATCAAGGCTCGGTACACGTATACTCCCAAACCTTTGGGCCAACTCAAGCTTGCTGAG AGGTATTATCGCGCTCCCGCACCGGGAGACATGAGGACTCCCTGTCCCGGGTTAAACACGTTGGCGAACCATGGGATCATGTAGGTTTTGCTGAACCTTTGGCCTCAGAAAGAGGAACAT TGACCTGAGGACTTCGATTTATATAGCCACCGTAACGGCAAGAAGATCAACCCGATCGACCTCTTCCACGCCCTCCGCGACTACTATTCCGCGGACTTCTTCACCTGCTTCTCCCTCCTC TCCGGTGCTCTCCAAGTCGGTCTCTCCGATGACGGGTACACCCTCGACCTTGGCCGAATCGGCCTCCACAACTTCATCGAACACGATGCTTCGATTTCGCGCCCAGATTCCGGATGGGGA AAGCAGGAGTGTCCGGATATGGAATTAGTGAAGAAGTTCTGTGAGTTTGGCCGTGGTGAGGGGGAGGGTATGATTGGGGTGAAGGAAATTGCGAGGTTTAGGGTGATGAGGGAGAGGGAG TGTCAAAGGCATAATCCCCAGTACGAGCTTTCTGGTCTTCACCCGTTCATCACGCGTGGTGAGCCGGCGCTCATCCTTGACGTTTTTGGTGATGGGTATGGGACGGATATCCATGTCTCC ACTACGATCATCGAGACTTGGATGGGGAAGGAGACTTTCCCTGCTGGGTATGTTCCG |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GTTCAGCGCCTTATCTGGGCGTTCACGCTCTTCACGAACATCATCTGGTGGGCACCGACTATGATCAAGGCTCGGTACACGTATACTCCCAAACCTTTGGGCCAACTCAAGCTTGCTGAG AGGTATTATCGCGCTCCCGCACCGGGAGACATGAGGACTCCCTGTCCCGGGTTAAACACGTTGGCGAACCATGGGATCATCCACCGTAACGGCAAGAAGATCAACCCGATCGACCTCTTC CACGCCCTCCGCGACTACTATTCCGCGGACTTCTTCACCTGCTTCTCCCTCCTCTCCGGTGCTCTCCAAGTCGGTCTCTCCGATGACGGGTACACCCTCGACCTTGGCCGAATCGGCCTC CACAACTTCATCGAACACGATGCTTCGATTTCGCGCCCAGATTCCGGATGGGGAAAGCAGGAGTGTCCGGATATGGAATTAGTGAAGAAGTTCTGTGAGTTTGGCCGTGGTGAGGGGGAG GGTATGATTGGGGTGAAGGAAATTGCGAGGTTTAGGGTGATGAGGGAGAGGGAGTGTCAAAGGCATAATCCCCAGTACGAGCTTTCTGGTCTTCACCCGTTCATCACGCGTGGTGAGCCG GCGCTCATCCTTGACGTTTTTGGTGATGGGTATGGGACGGATATCCATGTCTCCACTACGATCATCGAGACTTGGATGGGGAAGGAGACTTTCCCTGCTGGGTATGTTCCG |
Retrieve as FASTA
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