Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
322 (303) |
PWM (Da): |
35582.36 (33507.2) |
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PI (pH):
| 5.36 (5.64) |
Peptide Signal:
| cut: 20 range:20-322 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MATLNLFIVI MLMDIIVSGW RFGANGLSMN YYMMSCPFAE NIVKDTVNRA LQSDPTLAAA LIRMHFHDCF IQGCDASILI DSTKDNTAEK DSPANLSLRG YEIIDDIKEQ LENQCPGIVS
CADILAMASR DAVFFAGGPV YDIPKGRKDG TRSKIMDTIN LPAPTLNSSE LIKMFGQHGF TAQEMVVLSG AHTLGVARCS SFKHRLSKFD STHEVDPSID TQFVKTLSMT CSVGDNAEQP
FDSTKNSFDN DYFNQLQRRN GVLFSDQTLF ATPRTKGIVN GYAMNQAMFF FDFQQAMVKM SLLDVKEGNN GEVRANCRQI NN
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic and EST (First exon is missing. Incorrect prediction from MPGR. cra_locus_5755_iso_5_len_875_ver_3, and cra_locus_5755_iso_1_len_406_ver_3). Incorrect prediction (only exons 3 and 4 are predicted in CRO_T030339) |
CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CAATCTGATC CTACTCTTGC TGCTGCTCTT ATTAGAATGC ATTTCCATGA CTGCTTCATT CAGGGATGTG ATGCATCAAT TCTAATTGAT TCAACAAAAG ACAACACAGC AGAGAAAGAT
TCACCTGCAA ATCTGAGCTT GAGAGGTTAT GAGATTATAG ATGATATAAA GGAACAATTG GAAAATCAGT GCCCAGGAAT TGTTTCCTGT GCTGATATTC TTGCAATGGC TTCCAGGGAT
GCTGTCTTCT TTGCTGGAGG ACCAGTATAT GACATTCCCA AAGGAAGAAA AGATGGAACA AGATCTAAAA TAATGGACAC AATCAATTTG CCAGCTCCCA CTTTAAACTC TTCAGAGCTC
ATCAAGATGT TTGGTCAGCA CGGTTTTACT GCTCAAGAAA TGGTGGTTTT GTCCGGGGCA CACACACTAG GAGTGGCAAG GTGTTCATCA TTCAAGCACA GATTGAGTAA ATTTGACTCA
ACCCATGAGG TGGATCCAAG TATAGACACA CAATTTGTGA AAACCCTATC AATGACATGC AGTGTTGGTG ATAATGCTGA ACAGCCCTTT GATTCAACAA AGAATAGTTT TGACAATGAT
TATTTCAACC AATTGCAAAG GAGAAACGGT GTGCTTTTCT CTGATCAAAC ACTATTTGCC ACTCCAAGAA CCAAAGGGAT TGTCAATGGT TATGCTATGA ATCAAGCCAT GTTTTTCTTT
GATTTCCAAC AAGCTATGGT CAAAATGAGT TTGCTTGATG TTAAAGAAGG AAATAATGGG GAAGTTAGGG CCAATTGTCG CCAAATCAAC AATTGA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CAATCTGATC CTACTCTTGC TGCTGCTCTT ATTAGAATGC ATTTCCATGA CTGCTTCATT CAGGGATGTG ATGCATCAAT TCTAATTGAT TCAACAAAAG ACAACACAGC AGAGAAAGAT
TCACCTGCAA ATCTGAGCTT GAGAGGTTAT GAGATTATAG ATGATATAAA GGAACAATTG GAAAATCAGT GCCCAGGAAT TGTTTCCTGT GCTGATATTC TTGCAATGGC TTCCAGGGAT
GCTGTCTTCT TTGCTGGAGG ACCAGTATAT GACATTCCCA AAGGAAGAAA AGATGGAACA AGATCTAAAA TAATGGACAC AATCAATTTG CCAGCTCCCA CTTTAAACTC TTCAGAGCTC
ATCAAGATGT TTGGTCAGCA CGGTTTTACT GCTCAAGAAA TGGTGGTTTT GTCCGGGGCA CACACACTAG GAGTGGCAAG GTGTTCATCA TTCAAGCACA GATTGAGTAA ATTTGACTCA
ACCCATGAGG TGGATCCAAG TATAGACACA CAATTTGTGA AAACCCTATC AATGACATGC AGTGTTGGTG ATAATGCTGA ACAGCCCTTT GATTCAACAA AGAATAGTTT TGACAATGAT
TATTTCAACC AATTGCAAAG GAGAAACGGT GTGCTTTTCT CTGATCAAAC ACTATTTGCC ACTCCAAGAA CCAAAGGGAT TGTCAATGGT TATGCTATGA ATCAAGCCAT GTTTTTCTTT
GATTTCCAAC AAGCTATGGT CAAAATGAGT TTGCTTGATG TTAAAGAAGG AAATAATGGG GAAGTTAGGG CCAATTGTCG CCAAATCAAC AATTGATCAT CTTGTCAATT ATTAAGATAA
TTAATTAATT GTACACTACT TTTTACATAT ATATA
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Retrieve as FASTA
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