Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
315 (290) |
PWM (Da): |
33511.72 (30822.1) |
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PI (pH):
| 6.65 (5.33) |
Peptide Signal:
| cut: 26 range:26-315 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MKKLVRLLIM VEVVAMAAAP RRAAALSMDY YGMSCPFAEM VVRSVVSQAL MGDPSLAASL LRLHFHDCFV QGCDASVLLD STPDNTAEKD ALANKSLRGF EVIDRIKDAL ESRCPGVVSC
ADVLALAARD AVIMAGGPYY GVATGRRDGT RSSAADTVAL PPPFLNATAL IQLFGTHGFT AQDMVALSGG HTLGRAHCAN FKNRVATEAA TLDAALASSL GSTCAAGGDA ATATFDRTSN
VFDGVYFREL QQRRGLLTSD QTLFESPETK RLVNMFAMNQ AYFFYAFQQG MLKMGQLDLK EGDAGEVRTS CRVVN
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Retrieve as FASTA
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Remarks |
chromosome 8. 3 ESTs. Rice blast fungus interaction, water-deficit. |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGAAGAAGC TGGTGAGGTT GCTGATCATG GTGGAGGTGG TGGCCATGGC GGCGGCGCCG CGGCGAGCGG CGGCGCTGAG CATGGACTAC TACGGGATGA GCTGCCCGTT CGCGGAGATG
GTGGTGAGGA GCGTGGTGAG CCAGGCGCTG ATGGGCGACC CGTCGCTCGC CGCCAGCCTC CTCCGCCTCC ACTTCCATGA CTGCTTCGTC CAGGGCTGCG ACGCCTCCGT CCTCCTCGAC
TCCACCCCGG ACAACACCGC CGAGAAGGAC GCGCTCGCCA ACAAGAGCCT CCGCGGCTTC GAGGTCATCG ACCGCATCAA GGACGCCCTC GAGTCGCGGT GCCCCGGCGT CGTCTCCTGC
GCCGACGTCC TCGCCCTCGC CGCGCGCGAC GCCGTCATCA TGGCGGGGGG CCCGTACTAC GGCGTGGCGA CGGGGAGGAG GGACGGGACG CGGTCTAGCG CGGCCGACAC GGTGGCGCTG
CCGCCGCCGT TCTTGAACGC GACGGCGCTG ATCCAGCTGT TCGGGACGCA CGGGTTCACC GCGCAGGACA TGGTGGCGCT GTCGGGGGGG CACACGCTGG GGCGGGCGCA CTGCGCCAAC
TTCAAGAACC GGGTGGCGAC GGAGGCGGCG ACGCTGGACG CGGCGCTGGC GTCGTCGCTG GGCAGCACGT GCGCCGCCGG CGGGGACGCC GCGACGGCGA CGTTCGACCG GACGAGCAAC
GTGTTCGACG GGGTCTACTT CCGCGAGCTG CAGCAGCGGC GGGGCCTGCT GACCTCCGAC CAGACGCTGT TCGAGTCGCC GGAGACGAAG CGGCTGGTGA ACATGTTCGC CATGAACCAG
GCATACTTCT TCTACGCGTT CCAGCAGGGG ATGCTCAAGA TGGGGCAGCT CGACCTCAAG GAGGGCGACG CCGGCGAGGT CAGGACATCT TGCAGGGTCG TCAACTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGAAGAAGC TGGTGAGGTT GCTGATCATG GTGGAGGTGG TGGCCATGGC GGCGGCGCCG CGGCGAGCGG CGGCGCTGAG CATGGACTAC TACGGGATGA GCTGCCCGTT CGCGGAGATG
GTGGTGAGGA GCGTGGTGAG CCAGGCGCTG ATGGGCGACC CGTCGCTCGC CGCCAGCCTC CTCCGCCTCC ACTTCCATGA CTGCTTCGTC CAGGGCTGCG ACGCCTCCGT CCTCCTCGAC
TCCACCCCGG ACAACACCGC CGAGAAGGAC GCGCTCGCCA ACAAGAGCCT CCGCGGCTTC GAGGTCATCG ACCGCATCAA GGACGCCCTC GAGTCGCGGT GCCCCGGCGT CGTCTCCTGC
GCCGACGTCC TCGCCCTCGC CGCGCGCGAC GCCGTCATCA TGGCGGGGGG CCCGTACTAC GGCGTGGCGA CGGGGAGGAG GGACGGGACG CGGTCTAGCG CGGCCGACAC GGTGGCGCTG
CCGCCGCCGT TCTTGAACGC GACGGCGCTG ATCCAGCTGT TCGGGACGCA CGGGTTCACC GCGCAGGACA TGGTGGCGCT GTCGGGGGGG CACACGCTGG GGCGGGCGCA CTGCGCCAAC
TTCAAGAACC GGGTGGCGAC GGAGGCGGCG ACGCTGGACG CGGCGCTGGC GTCGTCGCTG GGCAGCACGT GCGCCGCCGG CGGGGACGCC GCGACGGCGA CGTTCGACCG GACGAGCAAC
GTGTTCGACG GGGTCTACTT CCGCGAGCTG CAGCAGCGGC GGGGCCTGCT GACCTCCGAC CAGACGCTGT TCGAGTCGCC GGAGACGAAG CGGCTGGTGA ACATGTTCGC CATGAACCAG
GCATACTTCT TCTACGCGTT CCAGCAGGGG ATGCTCAAGA TGGGGCAGCT CGACCTCAAG GAGGGCGACG CCGGCGAGGT CAGGACATCT TGCAGGGTCG TCAACTGA
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Retrieve as FASTA
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