Entry information : CroPrx17 (cra_locus_58522_iso_1_len_988_ver_3)
Entry ID 11275
Creation 2012-08-20 (Christophe Dunand)
Last sequence changes 2012-08-20 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2012-08-20 (Christophe Dunand)
Peroxidase information: CroPrx17 (cra_locus_58522_iso_1_len_988_ver_3)
Name (synonym) CroPrx17 (cra_locus_58522_iso_1_len_988_ver_3)
Class Class III peroxidase     [Orthogroup: Prx021]*
Taxonomy Eukaryota Viridiplantae Streptophyta Apocynaceae Catharanthus
Organism Catharanthus roseus    [TaxId: 4058 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CroPrx17
start..stop
S start..stop
LePrx50 620 0 1..325 15..341
StPrx75 597 0 1..325 15..341
MguPrx88 530 0 2..324 13..334
CroPrx18 523 0 6..325 1..318
Literature and cross-references CroPrx17 (cra_locus_58522_iso_1_len_988_ver_3)
Protein sequence: CroPrx17 (cra_locus_58522_iso_1_len_988_ver_3)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   325 (308)
PWM (Da):   %s   35816.11 (33906.0)  
PI (pH):   %s   6.5 (5.72) Peptide Signal:   %s   cut: 18 range:18-325
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
RILILVFIGI CFSKLHGISD SHLSLDYYKK TCPSVEGIVR KEMECACLSD PRNAALILRL HFHDCFVQGC DGSVLLDDTV TLKGEKNAPN NKNALKGFRI IDRIKNRIES ECPGIVSCAD  ILTIAARDAV VLVGGPYWDV PLGRKDSKTA GYELTDTNIP TADEGLISII SKFISQGLSV TDMVALSGAH TIGKARCVNF RNRIYGDFKM TTSMMNPISS SYLRKLKSLC PPIGSESSDN 
NETSMDNVTP NLFDNSYYHV LLKGEGLINS DQELYSSFLA IQTKKIVEKY AENTIAFFEQ FAESMVKMGN ITNSETYVNG EVRKS 

Retrieve as FASTA  
Remarks Partial sequence from EST. Short 5' and 3'ends are missing.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AGAATTTTGA TTTTGGTATT TATTGGCATT TGTTTTAGTA AATTGCATGG AATTAGTGAT TCACATTTGA GTCTTGATTA TTACAAGAAA ACATGTCCTT CAGTAGAAGG AATTGTGAGG  AAAGAAATGG AATGTGCCTG TCTTTCTGAT CCTCGTAATG CTGCTTTGAT TTTGAGATTA CATTTCCATG ACTGCTTTGT TCAGGGTTGC GATGGCTCGG TTTTGTTGGA TGATACAGTG  ACATTAAAAG GAGAAAAGAA TGCCCCAAAC AACAAGAATG CATTGAAAGG ATTCAGAATT ATTGACAGAA TAAAAAACAG AATTGAATCC GAGTGCCCAG GAATTGTTTC TTGTGCTGAT  ATTCTAACTA TTGCTGCTAG AGATGCTGTT GTTTTGGTTG GTGGACCTTA TTGGGATGTT CCATTAGGTA GAAAAGATTC AAAAACTGCA GGCTATGAAT TGACAGATAC AAATATTCCA  ACAGCTGATG AAGGACTTAT TTCTATTATT TCTAAGTTTA TTTCACAGGG ACTTTCTGTT ACTGATATGG TTGCTCTTTC TGGTGCACAC ACAATAGGGA AAGCAAGGTG TGTGAATTTC  AGAAATAGAA TTTATGGAGA TTTCAAAATG ACAACTTCAA TGATGAATCC AATTTCTTCC TCATACTTGA GAAAATTAAA ATCATTGTGT CCTCCAATTG GAAGTGAATC ATCAGACAAC  AATGAAACAT CTATGGACAA TGTAACTCCA AATTTATTTG ACAATTCATA TTACCATGTC TTGCTTAAAG GAGAAGGACT CATAAATTCA GACCAAGAAT TATATTCAAG TTTTCTTGCA  ATTCAAACAA AGAAAATTGT TGAGAAATAT GCTGAAAATA CAATAGCATT TTTTGAACAA TTTGCTGAGT CAATGGTGAA AATGGGAAAT ATTACAAATT CAGAGACTTA TGTGAATGGA 
GAAGTTAGAA AGAGC 

Retrieve as FASTA