Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
326 (307) |
PWM (Da): |
35844.56 (33782.4) |
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PI (pH):
| 8.93 (8.88) |
Peptide Signal:
| cut: 20 range:20-326 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MKGINFLVII FMIILGVCGI SNGQQGLRKN YYAKSCPIAE TIVKQISEKL VAQNANVAAR LLRLHFHDCF VRGCDGSVLI DSTPINTAEK AALPNRFVSG FEIIDEIKAE LERRCPGTVS
CADIIALASR DTVSYQYRRP LWEVFTGRKD GRISLVAEAA ANLPSPFVGF LALVKNFADQ GLNWEDLVIL SGGHTIGNTH CTLLTNRLYN FTGNGSGTDP DINPGYAKNL MRICPNGGDP
LKVLEMDPKS STNFDTNYYK LVSRNMGIFQ SDEALLKDPK AAKLVKDLQN PRLFFPRFAA SMKKMGEIIS LKNGEGEIRK NCRVVN
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Retrieve as FASTA
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Remarks |
Partial sequence from genomic and EST.(5' ane 3' ends are missing). Incorrect prediction ; CRO_T031650 (last exon, scaf border) and cro_scaffold_3067066 |
CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGGCTAAGGA AGAATTACTA TGCAAAGAGC TGTCCAATTG CTGAAACAAT TGTGAAGCAA ATTTCAGAGA AATTAGTTGC TCAAAATGCC AATGTAGCTG CTAGGCTTCT AAGGCTTCAT
TTCCATGATT GTTTTGTAAG GGGTTGTGAT GGATCCGTTC TTATTGACTC AACTCCATCT AATACAGCTG AAAAAGCTGC TTTGCCAAAT CGATTTGTAT CTGGATTTGA GATTATTGAC
GAAATAAAGG CTGAACTTGA AAGAAGATGT CCAGGCACAG TTTCGTGTGC TGATATTATT GCTTTGGCTG CTAGAGATAC TGTTTCATAC CAATATCGTC Gnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnCTTGTCA GGAGGACATA CTATTGGAAA CACACATTGT ACTTTGCTCA CAAACAGACT GTACAATTTC
ACAGGAAATG GATCGGGTAC AGATCCAGAT ATCAACCCAG ATTATGCTAA GAATTTGATG AGAATTTGCC CTAATGGAGG TGATCCATTA AAGGTTCTTG AAATGGATCC ACGAAGTTCA
ACCAATTTTG ATACAAATTA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGGCTAAGGA AGAATTACTA TGCAAAGAGC TGTCCAATTG CTGAAACAAT TGTGAAGCAA ATTTCAGAGA AATTAGTTGC TCAAAATGCC AATGTAGCTG CTAGGCTTCT AAGGCTTCAT
TTCCATGATT GTTTTGTAAG GGGTTGTGAT GGATCCGTTC TTATTGACTC AACTCCATCT AATACAGCTG AAAAAGCTGC TTTGCCAAAT CGATTTGTAT CTGGATTTGA GATTATTGAC
GAAATAAAGG CTGAACTTGA AAGAAGATGT CCAGGCACAG TTTCGTGTGC TGATATTATT GCTTTGGCTG CTAGAGATAC TGTTTCATAC CAATATCGTC Gnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnCTTGTCA GGAGGACATA CTATTGGAAA CACACATTGT ACTTTGCTCA CAAACAGACT GTACAATTTC
ACAGGAAATG GATCGGGTAC AGATCCAGAT ATCAACCCAG ATTATGCTAA GAATTTGATG AGAATTTGCC CTAATGGAGG TGATCCATTA AAGGTTCTTG AAATGGATCC ACGAAGTTCA
ACCAATTTTG ATACAAATTA
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Retrieve as FASTA
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