Sequence Properties
first value : protein second value (mature protein)
|
Length (aa): |
201 |
PWM (Da): |
21681.08 |
|
PI (pH):
| 9.99 |
|
Sequence 0
Send to BLAST
Send to Peroxiscan
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ASLLLDSSKG IVTEKGSNPN KNSARGFEVL DDIKSALEKE CPQTVSCADI LALAARDSTx ALSGSHTIGN SKCTSFRQRL YNQSGKNKPD STLDQSYAAQ LRNRCPKSGG DQNLFFLDFV
SPTKFDNSYF KLLLASKGLL NSDQVLATKS RASLALVKQY AENNALFFDH FAKSMVKMGN ISPLTGSRGE IRKNCRKINS S
|
Retrieve as FASTA
|
|
Remarks |
Partial sequence from EST. 5'end and exon 3 are missing. Incorrect prediction (exon exon is missing: problem of assembly!!!) |
CDS►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GCATCTTTGC TTCTGGATAG CAGCAAAGGA ATAGTAACAG AAAAGGGATC AAACCCCAAC AAGAATTCAG CTCGTGGATT TGAAGTCCTT GATGACATTA AATCTGCACT CGAGAAGGAA
TGTCCACAAA CTGTCTCTTG TGCTGATATC TTGGCACTTG CTGCAAGAGA TTCTACTnnn GCTTTATCTG GGAGCCACAC AATTGGAAAT TCAAAATGTA CCAGCTTCAG ACAAAGGCTC
TACAATCAGT CAGGAAAAAA TAAACCAGAC TCTACTCTGG ATCAATCATA TGCTGCCCAA TTGCGCAATA GGTGTCCAAA ATCTGGAGGC GATCAGAACC TATTTTTCTT GGACTTTGTT
TCCCCCACAA AATTTGATAA CAGCTACTTC AAGCTCTTGT TGGCTTCAAA GGGCCTTCTG AACTCTGACC AAGTTCTTGC TACTAAGAGT CGAGCATCAT TAGCTTTAGT GAAACAATAT
GCAGAGAACA ATGCCCTTTT CTTTGATCAC TTCGCCAAGT CTATGGTTAA GATGGGGAAC ATTTCTCCTT TGACTGGTTC CAGAGGGGAG ATCAGGAAGA ATTGCAGGAA GATCAACTCA
TCTTAA
|
Retrieve as FASTA
|
|
cDNA►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TGCATCTTTG CTTCTGGATA GCAGCAAAGG AATAGTAACA GAAAAGGGAT CAAACCCCAA CAAGAATTCA GCTCGTGGAT TTGAAGTCCT TGATGACATT AAATCTGCAC TCGAGAAGGA
ATGTCCACAA ACTGTCTCTT GTGCTGATAT CTTGGCACTT GCTGCAAGAG ATTCTACTnn nGCTTTATCT GGGAGCCACA CAATTGGAAA TTCAAAATGT ACCAGCTTCA GACAAAGGCT
CTACAATCAG TCAGGAAAAA ATAAACCAGA CTCTACTCTG GATCAATCAT ATGCTGCCCA ATTGCGCAAT AGGTGTCCAA AATCTGGAGG CGATCAGAAC CTATTTTTCT TGGACTTTGT
TTCCCCCACA AAATTTGATA ACAGCTACTT CAAGCTCTTG TTGGCTTCAA AGGGCCTTCT GAACTCTGAC CAAGTTCTTG CTACTAAGAG TCGAGCATCA TTAGCTTTAG TGAAACAATA
TGCAGAGAAC AATGCCCTTT TCTTTGATCA CTTCGCCAAG TCTATGGTTA AGATGGGGAA CATTTCTCCT TTGACTGGTT CCAGAGGGGA GATCAGGAAG AATTGCAGGA AGATCAACTC
ATCTTAAGAG AGCACATTAC CTCCATTACA GCAGCAGACC AATACTTGTG CCTCTATTGT TAGTTTGTTA CGT
|
Retrieve as FASTA
|
|