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Entry information : CroPrx40(CRO_T030436 / cra_locus_18123_iso_1_len_920_ver_3)
Entry ID 11305
Creation 2012-09-13 (Christophe Dunand)
Last sequence changes 2012-09-13 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-04-15 (Christophe Dunand)
Peroxidase information: CroPrx40(CRO_T030436 / cra_locus_18123_iso_1_len_920_ver_3)
Name CroPrx40(CRO_T030436 / cra_locus_18123_iso_1_len_920_ver_3)
Class Class III peroxidase     [Orthogroup: Prx015]*
Taxonomy Eukaryota Viridiplantae Streptophyta Apocynaceae Catharanthus
Organism Catharanthus roseus    [TaxId: 4058 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CroPrx40
start..stop		 S start..stop
NnPrx02 515 0 9..318 8..316
NtPrx87-1B 514 0 5..318 6..322
NtPrx87-1A 506 0 5..318 6..322
VvPrx64 506 0 24..315 28..319
Literature and cross-references CroPrx40(CRO_T030436 / cra_locus_18123_iso_1_len_920_ver_3)
Protein sequence: CroPrx40(CRO_T030436 / cra_locus_18123_iso_1_len_920_ver_3)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   318 (294)
PWM (Da):   %s   34534.37 (31934.0) Transmb domain:   %s   i7-29o
PI (pH):   %s   8.74 (8.74) Peptide Signal:   %s   cut: 25 range:25-318
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAVISFVSLV SVFLLSWFSP FATALSTTYY DRTCPKLESI ITEVVKKAMI NDKTVPAALL RMHFHDCFVR GCDGSVLLNS TKNNQAEKDG PPNISLHAFY VIDIAKQEIE ASCPGVVSCA  DILALAARDA IALSGGPNWN VPKGRKDGRI SKANETRQLP APTFNLSQLQ QSFSQRGLSM DDLVALSGGH TLGFAHCSSF QNRIHNFAKN SDVDPSMHSS FASSLRQICP LNNKVKNAGA 
NMDSSSTVFD NAYYKLLLQG KSLFSSDQSL LTNSRTQALV SKFANSESEF YAAFVKSMIK MSSITGGQEI RLNCRTVN 

Retrieve as FASTA  
Remarks Complete sequence from geneomic and EST (5' end is missing).
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAGTAA TTAGCTTTGT TTCACTAGTC TCAGTTTTCC TCCTGTCTTG GTTTTCGCCT TTCGCGACAG CCCTTAGTAC AACATACTAT GATCGTACGT GTCCAAAACT CGAATCAATA  ATCACCGAAG TAGTGAAGAA AGCTATGATA AATGATAAAA CAGTTCCGGC AGCGCTTCTT CGGATGCATT TCCATGACTG CTTCGTCAGA GTACGCGATT AATCATATTT TGATAATTTG  TTACACGATT TTTTATCGCG TTTTTTAGCT AATTAATTTG TTTTAATTTT AAGGGTTGTG ATGGTTCTGT TCTTCTAAAC TCAACAAAGA ACAATCAAGC TGAAAAAGAT GGACCTCCTA  ACATTTCATT ACATGCATTT TATGTCATTG ACATTGCCAA ACAAGAAATT GAAGCCTCAT GTCCTGGTGT GGTTTCTTGT GCTGACATTC TTGCTTTAGC TGCTAGAGAC GCTATCGCAC  TTGTAAGTAT ACATATATAT ATTACGGGAA CGAATCATTT AATTAGCTAC ATCATATTAT CTTGTAAAAC AGATATATAT ATATAATAAT TAATATTATT TCTCGGGATT TATAAACCTT  AATTTTTTTA TGTGTTATTA GTCTGGAGGT CCCAATTGGA ATGTACCCAA AGGTAGAAAA GATGGAAGAA TTTCCAAGGC CAATGAGACT AGACAACTAC CTGCTCCCAC CTTCAATTTA  TCTCAGTTGC AGCAAAGCTT CTCCCAAAGA GGTCTTTCTA TGGACGATTT AGTAGCACTT TCAGGTGAAA ATACATATAT ATATTAAAGT TTTTTTCTCA AAATTCTTTA TAACATTTTA  TCACGCGTTA TCCTTACAAA CCCAAAAGGA CAACTTCATA GCAATATTCA TTGCCAACTA CTTGACTGGT TGCTATATTA CCATCGTTTA CATCAGACAT ATTCTTTATA ACATTTTATC  ACGCAATATC CATGCAGGCC TAAAAGGGTT ACTACCTAGC AGTATTTATG TCCAATTATT CGACTGATCT TTGTATTTGT ATTCGGTTCA TCATACTTAT TCTTTATAGC ATTTTATCAC  GCAATATCCA TGCAGGCCCA AAAGGGCCAC TACCTAACAG TATCCACGTC CAATTATTGG ACTAATCTTT GTATTAGTAT TCGTTTCATC ATACTTATTC TTTATAGCAT GTTGTCACGG  TCTGTCTTTG AAGGCCTGAA AGGGCAACTA ACTAGTAGCA TTCACGGTTA TCTATTTAAC TAGTCACTAT GTTACCATCT GTTCCGATCA AACTTATTCT TGAAAACTTA AATTTGAATG  CAGGAGGTCA CACTCTAGGA TTTGCTCATT GTTCATCATT TCAAAACAGG ATCCATAACT TTGCCAAAAA CAGTGATGTA GATCCTTCAA TGCATTCATC ATTTGCAAGC AGCTTAAGGC  AAATTTGTCC CCTAAACAAC AAGGTGAAGA ATGCTGGTGC AAACATGGAT TCTTCTTCAA CAGTGTTTGA TAATGCTTAC TACAAGTTAC TTCTTCAAGG GAAAAGTCTT TTCTCTTCTG  ATCAATCTTT ACTAACTAAT TCAAGAACTC AAGCATTGGT TTCAAAATTT GCAAATTCTG AATCAGAGTT TTATGCAGCA TTTGTCAAGT CTATGATCAA GATGAGTAGC ATCACCGGGG 
GACAAGAAAT CAGGTTGAAT TGTAGAACGG TTAATTAG 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAGTAA TTAGCTTTGT TTCACTAGTC TCAGTTTTCC TCCTGTCTTG GTTTTCGCCT TTCGCGACAG CCCTTAGTAC AACATACTAT GATCGTACGT GTCCAAAACT CGAATCAATA  ATCACCGAAG TAGTGAAGAA AGCTATGATA AATGATAAAA CAGTTCCGGC AGCGCTTCTT CGGATGCATT TCCATGACTG CTTCGTCAGA GGTTGTGATG GTTCTGTTCT TCTAAACTCA  ACAAAGAACA ATCAAGCTGA AAAAGATGGA CCTCCTAACA TTTCATTACA TGCATTTTAT GTCATTGACA TTGCCAAACA AGAAATTGAA GCCTCATGTC CTGGTGTGGT TTCTTGTGCT  GACATTCTTG CTTTAGCTGC TAGAGACGCT ATCGCACTTT CTGGAGGTCC CAATTGGAAT GTACCCAAAG GTAGAAAAGA TGGAAGAATT TCCAAGGCCA ATGAGACTAG ACAACTACCT  GCTCCCACCT TCAATTTATC TCAGTTGCAG CAAAGCTTCT CCCAAAGAGG TCTTTCTATG GACGATTTAG TAGCACTTTC AGGAGGTCAC ACTCTAGGAT TTGCTCATTG TTCATCATTT  CAAAACAGGA TCCATAACTT TGCCAAAAAC AGTGATGTAG ATCCTTCAAT GCATTCATCA TTTGCAAGCA GCTTAAGGCA AATTTGTCCC CTAAACAACA AGGTGAAGAA TGCTGGTGCA  AACATGGATT CTTCTTCAAC AGTGTTTGAT AATGCTTACT ACAAGTTACT TCTTCAAGGG AAAAGTCTTT TCTCTTCTGA TCAATCTTTA CTAACTAATT CAAGAACTCA AGCATTGGTT 
TCAAAATTTG CAAATTCTGA ATCAGAGTTT TATGCAGCAT TTGTCAAGTC TATGATCAAG ATGAGTAGCA TCACCGGGGG ACAAGAAATC AGGTTGAATT GTAGAACGGT TAATTAG 

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAGTAA TTAGCTTTGT TTCACTAGTC TCAGTTTTCC TCCTGTCTTG GTTTTCGCCT TTCGCGACAG CCCTTAGTAC AACATACTAT GATCGTACGT GTCCAAAACT CGAATCAATA  ATCACCGAAG TAGTGAAGAA AGCTATGATA AATGATAAAA CAGTTCCGGC AGCGCTTCTT CGGATGCATT TCCATGACTG CTTCGTCAGA GGTTGTGATG GTTCTGTTCT TCTAAACTCA  ACAAAGAACA ATCAAGCTGA AAAAGATGGA CCTCCTAACA TTTCATTACA TGCATTTTAT GTCATTGACA TTGCCAAACA AGAAATTGAA GCCTCATGTC CTGGTGTGGT TTCTTGTGCT  GACATTCTTG CTTTAGCTGC TAGAGACGCT ATCGCACTTT CTGGAGGTCC CAATTGGAAT GTACCCAAAG GTAGAAAAGA TGGAAGAATT TCCAAGGCCA ATGAGACTAG ACAACTACCT  GCTCCCACCT TCAATTTATC TCAGTTGCAG CAAAGCTTCT CCCAAAGAGG TCTTTCTATG GACGATTTAG TAGCACTTTC AGGAGGTCAC ACTCTAGGAT TTGCTCATTG TTCATCATTT  CAAAACAGGA TCCATAACTT TGCCAAAAAC AGTGATGTAG ATCCTTCAAT GCATTCATCA TTTGCAAGCA GCTTAAGGCA AATTTGTCCC CTAAACAACA AGGTGAAGAA TGCTGGTGCA  AACATGGATT CTTCTTCAAC AGTGTTTGAT AATGCTTACT ACAAGTTACT TCTTCAAGGG AAAAGTCTTT TCTCTTCTGA TCAATCTTTA CTAACTAATT CAAGAACTCA AGCATTGGTT  TCAAAATTTG CAAATTCTGA ATCAGAGTTT TATGCAGCAT TTGTCAAGTC TATGATCAAG ATGAGTAGCA TCACCGGGGG ACAAGAAATC AGGTTGAATT GTAGAACGGT TAATTAGTGA 
ATTCATCGCG ATTTGAATCA AACTACAAAA AATTCTCTCT ATTTTTATGT TCATAAAGTT GTATTTGTCA CAAAAAGTTC AGTATGAAAC AGTAAGTCCA GTGTGAGG 

Retrieve as FASTA