Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
265 |
PWM (Da): |
28423.3 |
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PI (pH):
| 8.91 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
KTVPAALLRM HFHDCFIRGC DASVLLNSKM NTAEKDGPPN VSLHAFFVID NAKKATEALC PGIVSCADIL AFAARDSVVI SGGPSWDVPK GRKDGRTSKA SETRQLPAPT FNISQLQQSF
AQRGLSLEDL VALSGGHTLG FSHCSSFNNR IHNFNTTHDV DPTLHPSLAA TLKGICPLKN RAKNAGTAMD PSSTTFDNTY YKSILQNTSL FSSDQALLSI PKTKALVSEF ASSQEAFFKA
FANSMIKMSS INGGQEVRKD CRVAN
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Retrieve as FASTA
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Remarks |
Partial sequence from two contig (short overlap of 26 nt but help of the close ortholg from Nt). Short 5' end is missing. |
CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AAAACTGTCC CTGCTGCCCT TCTAAGGATG CATTTCCATG ACTGTTTCAT AAGGGGGTGC GATGCTTCGG TGTTACTAAA CTCCAAGATG AACACTGCAG AAAAAGATGG TCCTCCTAAT
GTTTCTTTGC ATGCATTCTT TGTTATTGAT AATGCAAAGA AAGCCACTGA AGCCCTTTGC CCTGGCATAG TTTCCTGTGC TGATATCTTA GCCTTTGCTG CCAGAGATTC TGTTGTCATT
TCTGGCGGAC CTTCCTGGGA CGTGCCTAAA GGAAGAAAAG ATGGAAGAAC ATCAAAAGCT AGTGAAACTA GACAATTGCC AGCTCCCACT TTTAACATAT CTCAACTTCA ACAAAGCTTC
GCTCAAAGAG GATTATCACT AGAAGACCTT GTCGCTCTCT CAGGTGGACA CACCTTAGGT TTCTCTCATT GTTCATCTTT CAACAACAGG ATACACAACT TCAATACAAC CCATGATGTC
GACCCAACGT TACATCCATC TTTGGCTGCA ACTTTAAAGG GCATTTGTCC ACTCAAAAAC AGAGCAAAAA ATGCTGGAAC TGCCATGGAT CCTTCCTCAA CGACATTCGA CAATACATAT
TACAAGTCAA TTCTGCAGAA CACGAGCCTT TTCTCTTCAG ACCAAGCTTT GCTCAGCATT CCTAAGACTA AAGCTCTGGT TTCTGAATTT GCTAGCTCAC AAGAAGCTTT CTTTAAGGCT
TTTGCTAATT CCATGATCAA AATGAGCAGC ATAAATGGAG GCCAAGAGGT CAGAAAGGAT TGTAGGGTAG CTAATTGA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AAAACTGTCC CTGCTGCCCT TCTAAGGATG CATTTCCATG ACTGTTTCAT AAGGGGGTGC GATGCTTCGG TGTTACTAAA CTCCAAGATG AACACTGCAG AAAAAGATGG TCCTCCTAAT
GTTTCTTTGC ATGCATTCTT TGTTATTGAT AATGCAAAGA AAGCCACTGA AGCCCTTTGC CCTGGCATAG TTTCCTGTGC TGATATCTTA GCCTTTGCTG CCAGAGATTC TGTTGTCATT
TCTGGCGGAC CTTCCTGGGA CGTGCCTAAA GGAAGAAAAG ATGGAAGAAC ATCAAAAGCT AGTGAAACTA GACAATTGCC AGCTCCCACT TTTAACATAT CTCAACTTCA ACAAAGCTTC
GCTCAAAGAG GATTATCACT AGAAGACCTT GTCGCTCTCT CAGGTGGACA CACCTTAGGT TTCTCTCATT GTTCATCTTT CAACAACAGG ATACACAACT TCAATACAAC CCATGATGTC
GACCCAACGT TACATCCATC TTTGGCTGCA ACTTTAAAGG GCATTTGTCC ACTCAAAAAC AGAGCAAAAA ATGCTGGAAC TGCCATGGAT CCTTCCTCAA CGACATTCGA CAATACATAT
TACAAGTCAA TTCTGCAGAA CACGAGCCTT TTCTCTTCAG ACCAAGCTTT GCTCAGCATT CCTAAGACTA AAGCTCTGGT TTCTGAATTT GCTAGCTCAC AAGAAGCTTT CTTTAAGGCT
TTTGCTAATT CCATGATCAA AATGAGCAGC ATAAATGGAG GCCAAGAGGT CAGAAAGGAT TGTAGGGTAG CTAATTGATT ATTAATCCTT CCAAATTAAT GATAATCCAG AGTGCAGTGT
GTCTCCATTT GTTTCCTTTA TAT
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Retrieve as FASTA
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