Entry information : CroPrx50(CRO_T005191 / cra_locus_3407_iso_1_len_1207_ver_3)
Entry ID 11315
Creation 2012-09-17 (Christophe Dunand)
Last sequence changes 2012-09-17 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-04-05 (Christophe Dunand)
Peroxidase information: CroPrx50(CRO_T005191 / cra_locus_3407_iso_1_len_1207_ver_3)
Name CroPrx50(CRO_T005191 / cra_locus_3407_iso_1_len_1207_ver_3)
Class Class III peroxidase     [Orthogroup: Prx019]*
Taxonomy Eukaryota Viridiplantae Streptophyta Apocynaceae Catharanthus
Organism Catharanthus roseus    [TaxId: 4058 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CroPrx50
start..stop
S start..stop
CsPrx06 538 0 4..328 2..325
VvPrx06 537 0 9..328 4..325
CclPrx39 536 0 4..328 2..325
RcPrx30 527 0 9..328 9..328
Literature and cross-references CroPrx50(CRO_T005191 / cra_locus_3407_iso_1_len_1207_ver_3)
Protein sequence: CroPrx50(CRO_T005191 / cra_locus_3407_iso_1_len_1207_ver_3)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329 (309)
PWM (Da):   %s   36774.4 (34284.2)  
PI (pH):   %s   5.79 (5.79) Peptide Signal:   %s   cut: 16 range:16-324
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MTKSFFFCFF LFSLLNFAIA DVLRPGYYSD PCPEAEIIVR DVIKKAMAKE PRSAASVMRL QFHDCFVNGC DASLLLDDTP NMLGEKLALS NINSLRSFEV IDEVKEALER VCPGVVSCAD  IIIMASRDAV ALSGGPNWEV KLGRQDSLTA SQEDSNDIMP SPRANASMLI NLFNRFNLSV KDLVALSGSH SIGKGRCFSV VFRLYNQSGT GRPDPAIEPG YREKLNKICP IGGDENTTVN 
LDSTPELFDN QYFKDLVNGK GFLNSDETLF THPHTRKYVK LYSVDENEFF KAFVQGMLKM GDLQSGRPGE IRRNCRMVNR RPVDFLLED* 

Retrieve as FASTA  
Remarks Complete sequence genomic and from EST (Short PS is missing)
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACCAAAT CCTTCTTCTT CTGCTTCTTC CTCTTCTCCC TGCTCAACTT TGCTATTGCT GATGTTCTCC GTCCGGGTTA TTACTCCGAT CCTTGCCCAG AAGCCGAAAT TATCGTCCGA  GATGTGATCA AGAAAGCTAT GGCTAAAGAA CCCCGGAGCG CCGCCTCAGT TATGCGCTTA CAATTTCATG ACTGTTTTGT CAATGTAATG AATGCTCTGC TTTTTCAGTT GATCTTTTTT  GTCCATTTTT TAATTTGGGT ATGAATTTCT TAGTTTTTTG GGATGTTCAA TTCAATTGGT TTTTCTTTTT TCTTTTTTAT TTTATATGTT AGGGCTGTGA TGCTTCTTTG TTGCTTGATG  ACACGCCAAA CATGCTTGGG GAGAAGTTAG CCTTATCAAA TATTAACTCA TTGAGATCAT TCGAAGTTAT CGATGAAGTT AAAGAAGCCT TAGAAAGAGT GTGTCCTGGC GTTGTTTCTT  GCGCTGATAT CATAATCATG GCTTCTAGAG ATGCTGTTGC TCTGGTTAGT TTTTCCAATC CTCGGTAAAA GCATTAGCCC ATTTCAAAAA CTTCTTCAAA TCTTTCAGTT TCTCCGTTTT  AGCAAAATTT TCTTTGATCC CATTTGAATT TTAGCAAAAT TTTCTTGATC CCATTTGAAA TTTGCTCTGC CTCTGAACAT TTTTATGTAA CAGATACTAG TTTAGAAGTA AAAATTGAAA  CATTTTTTTA CCAACCCATC AAATTTTGAT GTATGTGTGT TTTTGTTGTT TTTCATTTTT CCACTGGTAA TTCAAGGAAA GCTGAATCAA AATTTTACTG TTTTTGTGTG TTACGAAACA  GAGTGGAGGA CCAAATTGGG AGGTAAAATT AGGCCGGCAA GATAGCTTAA CAGCAAGCCA AGAAGATTCA AACGATATAA TGCCAAGCCC AAGAGCCAAT GCAAGTATGC TAATTAACCT  TTTCAACAGA TTCAATCTTT CTGTTAAAGA TTTAGTAGCC CTTTCTGGCT CTCATTCCAT TGGCAAAGGG AGATGTTTTT CTGTCGTTTT TCGACTCTAT AACCAATCAG GAACTGGCAG  GCCCGACCCT GCAATTGAGC CAGGTTATAG AGAAAAGTTA AACAAGATTT GTCCAATTGG TGGAGACGAA AATACAACAG TAAATTTGGA TTCAACCCCT GAATTGTTTG ACAATCAGTA  CTTCAAGGAT TTAGTTAATG GCAAAGGATT CTTGAATTCT GATGAGACAC TTTTCACTCA CCCACATACT AGAAAATATG TGAAGCTTTA CAGTGTTGAT GAAAATGAGT TCTTTAAAGC 
TTTTGTTCAA GGGATGCTGA AAATGGGAGA CCTTCAATCT GGCCGGCCCG GCGAAATTAG GAGGAATTGC AGAATGGTAA ACAGACGTCC GGTGGATTTT TTGCTTGAGG ATTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACCAAAT CCTTCTTCTT CTGCTTCTTC CTCTTCTCCC TGCTCAACTT TGCTATTGCT GATGTTCTCC GTCCGGGTTA TTACTCCGAT CCTTGCCCAG AAGCCGAAAT TATCGTCCGA  GATGTGATCA AGAAAGCTAT GGCTAAAGAA CCCCGGAGCG CCGCCTCAGT TATGCGCTTA CAATTTCATG ACTGTTTTGT CAATGGCTGT GATGCTTCTT TGTTGCTTGA TGACACGCCA  AACATGCTTG GGGAGAAGTT AGCCTTATCA AATATTAACT CATTGAGATC ATTCGAAGTT ATCGATGAAG TTAAAGAAGC CTTAGAAAGA GTGTGTCCTG GCGTTGTTTC TTGCGCTGAT  ATCATAATCA TGGCTTCTAG AGATGCTGTT GCTCTGAGTG GAGGACCAAA TTGGGAGGTA AAATTAGGCC GGCAAGATAG CTTAACAGCA AGCCAAGAAG ATTCAAACGA TATAATGCCA  AGCCCAAGAG CCAATGCAAG TATGCTAATT AACCTTTTCA ACAGATTCAA TCTTTCTGTT AAAGATTTAG TAGCCCTTTC TGGCTCTCAT TCCATTGGCA AAGGGAGATG TTTTTCTGTC  GTTTTTCGAC TCTATAACCA ATCAGGAACT GGCAGGCCCG ACCCTGCAAT TGAGCCAGGT TATAGAGAAA AGTTAAACAA GATTTGTCCA ATTGGTGGAG ACGAAAATAC AACAGTAAAT  TTGGATTCAA CCCCTGAATT GTTTGACAAT CAGTACTTCA AGGATTTAGT TAATGGCAAA GGATTCTTGA ATTCTGATGA GACACTTTTC ACTCACCCAC ATACTAGAAA ATATGTGAAG  CTTTACAGTG TTGATGAAAA TGAGTTCTTT AAAGCTTTTG TTCAAGGGAT GCTGAAAATG GGAGACCTTC AATCTGGCCG GCCCGGCGAA ATTAGGAGGA ATTGCAGAAT GGTAAACAGA 
CGTCCGGTGG ATTTTTTGCT TGAGGATTGA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACCAAAT CCTTCTTCTT CTGCTTCTTC CTCTTCTCCC TGCTCAACTT TGCTATTGCT GATGTTCTCC GTCCGGGTTA TTACTCCGAT CCTTGCCCAG AAGCCGAAAT TATCGTCCGA  GATGTGATCA AGAAAGCTAT GGCTAAAGAA CCCCGGAGCG CCGCCTCAGT TATGCGCTTA CAATTTCATG ACTGTTTTGT CAATGGCTGT GATGCTTCTT TGTTGCTTGA TGACACGCCA  AACATGCTTG GGGAGAAGTT AGCCTTATCA AATATTAACT CATTGAGATC ATTCGAAGTT ATCGATGAAG TTAAAGAAGC CTTAGAAAGA GTGTGTCCTG GCGTTGTTTC TTGCGCTGAT  ATCATAATCA TGGCTTCTAG AGATGCTGTT GCTCTGAGTG GAGGACCAAA TTGGGAGGTA AAATTAGGCC GGCAAGATAG CTTAACAGCA AGCCAAGAAG ATTCAAACGA TATAATGCCA  AGCCCAAGAG CCAATGCAAG TATGCTAATT AACCTTTTCA ACAGATTCAA TCTTTCTGTT AAAGATTTAG TAGCCCTTTC TGGCTCTCAT TCCATTGGCA AAGGGAGATG TTTTTCTGTC  GTTTTTCGAC TCTATAACCA ATCAGGAACT GGCAGGCCCG ACCCTGCAAT TGAGCCAGGT TATAGAGAAA AGTTAAACAA GATTTGTCCA ATTGGTGGAG ACGAAAATAC AACAGTAAAT  TTGGATTCAA CCCCTGAATT GTTTGACAAT CAGTACTTCA AGGATTTAGT TAATGGCAAA GGATTCTTGA ATTCTGATGA GACACTTTTC ACTCACCCAC ATACTAGAAA ATATGTGAAG  CTTTACAGTG TTGATGAAAA TGAGTTCTTT AAAGCTTTTG TTCAAGGGAT GCTGAAAATG GGAGACCTTC AATCTGGCCG GCCCGGCGAA ATTAGGAGGA ATTGCAGAAT GGTAAACAGA  CGTCCGGTGG ATTTTTTGCT TGAGGATTGA TCAAAGGAAG AAGATGAAGT TCATAATTAA TGAGTATCAT CCTCCAATTA TGGTTACTTT TGATCTTAGT TCTAATCAGA TTGTTGTTAA  TTACTAATTT TTAGATTGAA GAAAAATGGT CAAAACAGAA AACTGACATA ATTGGATCTG ATTTTGTAAC TCACTCAATC AGAAACACCT CAAATCTTCC TTTATTTGAT GCTCCCTATC 
TTCTTCCGGC CAATAAAAAA A 

Retrieve as FASTA