Entry information : CroPrx52 (cra_locus_21299_iso_1_len_962_ver_3)
Entry ID 11317
Creation 2012-09-17 (Christophe Dunand)
Last sequence changes 2012-09-17 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2012-09-17 (Christophe Dunand)
Peroxidase information: CroPrx52 (cra_locus_21299_iso_1_len_962_ver_3)
Name (synonym) CroPrx52 (cra_locus_21299_iso_1_len_962_ver_3)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Apocynaceae Catharanthus
Organism Catharanthus roseus    [TaxId: 4058 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CroPrx52
start..stop
S start..stop
CroPrx75 126 6e-38 1..60 267..326
NnPrx68 110 5e-32 1..60 260..319
NnPrx38 110 8e-32 1..60 265..324
VvPrx62 104 1e-29 1..60 260..319
Literature and cross-references CroPrx52 (cra_locus_21299_iso_1_len_962_ver_3)
Protein sequence: CroPrx52 (cra_locus_21299_iso_1_len_962_ver_3)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   60
PWM (Da):   %s   6543.15  
PI (pH):   %s   8.48
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

QSDQELYKGD GSASDGLVRY YSNNPTAFWA DFSVSMIKMG NIKPLTGSNG EIRSNCRRIN 

Retrieve as FASTA  
Remarks partial sequence from EST. Large 5' end is missing.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CAATCGGATC AAGAACTTTA TAAAGGTGAT GGTAGTGCAA GTGATGGCCT TGTTAGGTAC TATAGTAATA ATCCTACGGC ATTTTGGGCT GATTTTTCTG TTTCTATGAT CAAGATGGGC 
AATATTAAAC CTCTTACTGG AAGCAATGGA GAAATCAGGT CCAATTGCCG GAGAATTAAC TAG 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CAATCGGATC AAGAACTTTA TAAAGGTGAT GGTAGTGCAA GTGATGGCCT TGTTAGGTAC TATAGTAATA ATCCTACGGC ATTTTGGGCT GATTTTTCTG TTTCTATGAT CAAGATGGGC  AATATTAAAC CTCTTACTGG AAGCAATGGA GAAATCAGGT CCAATTGCCG GAGAATTAAC TAGAATCAAT GTTTCTTATT TATACATTAG GAAAGGAGGA TGTAATTTGA ATTTTGGATC 
TTTACTTAGT AATTAAGGAG AGTTTTTTAT CATTACACTA AATGCCTTGC CAACGACTAA GGTTAATGTT TATTTGGGGT 

Retrieve as FASTA