Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
360 (325) |
PWM (Da): |
38382.18 (35075.3) |
Transmb domain: |
o10-32i |
PI (pH): |
4.9 (4.80) |
Peptide Signal: |
cut: 36 range:36-360 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MALLLLRRGGGFAAATVLAVVVVALVLSCGGGAEAAVRDLRVGYY AETCPDAEAVVRDTMARARAHEARSVASVMRLQFHDCFVNGCDGSVLMDATPTMAGEKEALSNINSLRSFDVVDEIKEALEERCPGVVSCADIIVMAARDAVALTGGPFWDVRLGREDSLTASQEDSDNIMPSPRANATTLIKLFAGYNLTVTDLVALSG SHSIGEARCFSIVFRLYNQSGSGRPDPNMDPAYRAGLDSLCPRGGDENVTGGMDATPLVFDNQYFKDLVRLRGFLNSDQTLFSDNAGTRLAVRKFGEDQGAFFRAFVEGMIKMGELQNPR KGEIRRNCRVANAPAPPPVEAEVAATSKAVVLVDF* |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (chromo 9, introns 1 and 2) and 8 ESTs.
Rice blast fungus interaction, leaf library induced by M.grisea |
Promoter►
Send to BLAST
Send to cis Analysis
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DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCGCTCCTCCTCCTCCGACGCGGCGGCGGCTTCGCTGCGGCCACGGTCCTCGCGGTCGTCGTCGTCGCGCTCGTCCTCTCCTGCGGTGGTGGCGCGGAGGCGGCCGTGAGGGACCTC AGGGTCGGGTACTACGCCGAGACGTGCCCCGACGCCGAGGCCGTCGTCCGCGACACCATGGCCCGGGCACGCGCGCACGAGGCCCGCAGCGTCGCGTCCGTCATGCGCCTCCAGTTCCAC GACTGCTTCGTCAACGTACGTCCTCGTATCGGTGATGCGATTCGAATTCTTCCGTTTCTCCTCCTCCGCCGTGCCGCGAACCGATCTGCCCTCTCGCGGTCACTCTTCGTGGGTTTCTGT GTGTGTGTGTGTGTGTGTTTTGTTTTTGTTTGGTTTTTCTCTCCATCTGATCGGGCGATCTGCCGTGATTTGGTTCGTCGTGTTCGAGCAGGGGGGTGCGACGGGTCGGTGCTGATGGAC GCAACGCCGACGATGGCGGGGGAGAAGGAGGCGCTCTCCAACATCAACTCGCTCCGCTCCTTCGACGTCGTCGACGAGATCAAGGAGGCGCTGGAGGAGCGCTGCCCTGGCGTCGTCTCC TGCGCCGACATCATCGTCATGGCCGCCCGCGACGCCGTCGCCCTGGTACGTACACACACCCCCTCCCGCCCCGCCCCGCCGCGTCCACGCCCACTCTAGTAGTAGTACTAGTAGTACTAC GTTTCTCTTCCATTTTCCTCGCGTTTCCGTGCAAAATCCGCTGCTCCGCCTCTGCCTCTCCCCAACCCGGCATTTCCCTCCTCTCAGGAGGCACCCAGCCTCCCCCAGGCAAAAGACAAG GAAGAAAAGTGCCAAATATCTCGATCGTTTTTTGTCATGGCTGGCTGCCCGCTGTGCGATGCAACGCCTATGCGTAACGAACAAAAAGTTAGTTCATCTCTTCGCTGCATGGTTGGTCAC CCCCAACCCAGGTGGCACAACACAGCCCTGACCTCGTTGACGAACCAACGAGCGATTGAGAATCGCCTCGCCTGGGAGTAAAATCCGGCGGTTGGCGCTCTCGTCATCGTGCGTACGGTG GCCGTAGTCACGTGTGTGTCACATGCCGTTTCATATGAACTTGAAATTTGGATTACTCCGCATGAATTCCATTCGGAATCATCCAAAACAAAGGCGTGTGTGCGTGTGTTTGAAAATCAT AGGGACTGACGAAAATCTCCGAAAGAATCAGTGACCCGAATTGTCAAAACCATCTTTCGTTTTCCTCTCCCTTATCCTTTCATGTGCACTATAGTCCTATGCCCCTGATAGGGACGGTAC AGTGCATGTACCCGTGCTCCCTGTAACCACCACACTGAACATCAAGCGGGGGCAAGGTTGCATGAACCGTCCCCTCGGCGTGCACAAGACAAGCGCGTTTGACGTAGCCGCCGTGCAGCG AGCCGGGAAAGGCCGGACGGTGGGGGAGCTAGGGGCCATGGCTACGTACGTGAAGCCGAACGGCCGGAGCTGCAGTTGTATAGTCCTTTTTAGACTTTTCCGTGCAGGCGATCGTGTACT GTGTCGGGGTGCTGTCAAAACTTGTCCTTGTTGATGGCTCATCGCCGAGGGGAGGAGGAGGACCTAGGACGGAGACAAAGCAGCATTGCTTTCGCAGTGGGTCACGCTGCCGATTTGTCA CTATGCTAGATTGCTAGCTAGCCATGTTCTTTTTGAGTTTTACACTTTTCACGCGGTTGACATGGAGCCGAGTATGATTTATCCTTCCGTTGCATTTTCATTTTCTGACATTTGATAACG TAAACAGCGGCTCTTAACTGTACTAGTAACTGAACTGTTCTGTCATGAGTGGGCCGTACTAATTTGGATGTAAGCAAAACACATAATGCTCTTATTGTCATTACGATCTTGGGTTGAATT TGCTGTTTTGCATGCAAATGTACAAATGTAGATACAAATAAATGATCATACGTTGCAATCAATATCCATGTCTGCACAATGCTGTAACATTGGAAGATTTGGGTTGTTAATTTCCAGGTT CGTTTGGCTGGTCAGTGAAATTATTGACTTGATTTGACTCTCTCTCCTCCTTTCTTGTGTCTGTATCACAGACACAGGTGGGCCCTTCTGGGACGTGAGGCTTGGGCGCGAGGACAGCCT GACGGCGAGCCAGGAGGACTCGGACAACATCATGCCGAGCCCACGCGCCAACGCCACCACCCTCATCAAGCTCTTCGCCGGCTACAACCTCACCGTCACCGACCTCGTCGCGCTCTCCGG CTCGCACTCCATCGGCGAGGCCCGCTGCTTCTCCATCGTCTTCCGCCTCTACAACCAGTCCGGCTCCGGCAGGCCCGACCCCAACATGGACCCCGCCTACCGCGCGGGGCTCGACTCGCT CTGCCCCCGCGGCGGCGACGAGAACGTCACCGGAGGCATGGACGCCACCCCGCTCGTCTTCGACAACCAGTACTTCAAGGACCTCGTCCGCCTCCGCGGCTTCCTCAACTCCGACCAGAC GCTCTTCTCCGACAACGCCGGGACCCGGCTCGCCGTGAGGAAATTCGGCGAGGACCAGGGCGCCTTCTTCAGGGCCTTCGTCGAAGGGATGATCAAGATGGGGGAGCTGCAGAACCCCAG GAAGGGAGAGATACGACGCAACTGCCGTGTCGCCAATGCCCCGGCGCCGCCGCCTGTGGAGGCGGAGGTGGCGGCGACGTCCAAGGCGGTGGTCCTGGTGGACTTCTGA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCGCTCCTCCTCCTCCGACGCGGCGGCGGCTTCGCTGCGGCCACGGTCCTCGCGGTCGTCGTCGTCGCGCTCGTCCTCTCCTGCGGTGGTGGCGCGGAGGCGGCCGTGAGGGACCTC AGGGTCGGGTACTACGCCGAGACGTGCCCCGACGCCGAGGCCGTCGTCCGCGACACCATGGCCCGGGCACGCGCGCACGAGGCCCGCAGCGTCGCGTCCGTCATGCGCCTCCAGTTCCAC GACTGCTTCGTCAACGGGTGCGACGGGTCGGTGCTGATGGACGCAACGCCGACGATGGCGGGGGAGAAGGAGGCGCTCTCCAACATCAACTCGCTCCGCTCCTTCGACGTCGTCGACGAG ATCAAGGAGGCGCTGGAGGAGCGCTGCCCTGGCGTCGTCTCCTGCGCCGACATCATCGTCATGGCCGCCCGCGACGCCGTCGCCCTGACAGGTGGGCCCTTCTGGGACGTGAGGCTTGGG CGCGAGGACAGCCTGACGGCGAGCCAGGAGGACTCGGACAACATCATGCCGAGCCCACGCGCCAACGCCACCACCCTCATCAAGCTCTTCGCCGGCTACAACCTCACCGTCACCGACCTC GTCGCGCTCTCCGGCTCGCACTCCATCGGCGAGGCCCGCTGCTTCTCCATCGTCTTCCGCCTCTACAACCAGTCCGGCTCCGGCAGGCCCGACCCCAACATGGACCCCGCCTACCGCGCG GGGCTCGACTCGCTCTGCCCCCGCGGCGGCGACGAGAACGTCACCGGAGGCATGGACGCCACCCCGCTCGTCTTCGACAACCAGTACTTCAAGGACCTCGTCCGCCTCCGCGGCTTCCTC AACTCCGACCAGACGCTCTTCTCCGACAACGCCGGGACCCGGCTCGCCGTGAGGAAATTCGGCGAGGACCAGGGCGCCTTCTTCAGGGCCTTCGTCGAAGGGATGATCAAGATGGGGGAG CTGCAGAACCCCAGGAAGGGAGAGATACGACGCAACTGCCGTGTCGCCAATGCCCCGGCGCCGCCGCCTGTGGAGGCGGAGGTGGCGGCGACGTCCAAGGCGGTGGTCCTGGTGGACTTC TGA |
Retrieve as FASTA
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