Entry information : CroPrx55 (cra_locus_71264_iso_1_len_277_ver_3)
Entry ID 11321
Creation 2012-09-17 (Christophe Dunand)
Last sequence changes 2012-09-17 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2012-09-17 (Christophe Dunand)
Peroxidase information: CroPrx55 (cra_locus_71264_iso_1_len_277_ver_3)
Name (synonym) CroPrx55 (cra_locus_71264_iso_1_len_277_ver_3)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Apocynaceae Catharanthus
Organism Catharanthus roseus    [TaxId: 4058 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CroPrx55
start..stop
S start..stop
NtPrx28-1A 177 9e-59 1..91 58..148
NtPrx28-1B 174 2e-56 1..91 58..148
LePrx19 169 5e-54 1..91 70..160
StPrx07 168 8e-54 1..91 64..154
Literature and cross-references CroPrx55 (cra_locus_71264_iso_1_len_277_ver_3)
Protein sequence: CroPrx55 (cra_locus_71264_iso_1_len_277_ver_3)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   91
PWM (Da):   %s   9537.86  
PI (pH):   %s   8.34
Sequence
Send to BLAST
Send to Peroxiscan
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FHDCFVRGCD ASILIKSTKS KKSERDAGPN QTVRGFELID TIKKSLETAC PSTVSCADII TLATRDAVAL AGGPSYAIPT GRRDGLVSNE A 

Retrieve as FASTA  
Remarks Partial sequence from EST. 5' and 3' ends are missing.
CDS
Send to BLAST
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TTTCATGACT GCTTTGTGAG AGGCTGTGAC GCATCCATAC TCATTAAGTC AACAAAGTCT AAGAAATCAG AGAGAGACGC TGGACCAAAC CAAACGGTAC GAGGTTTTGA GTTGATCGAT  ACAATCAAGA AAAGCCTAGA AACTGCTTGC CCATCAACCG TTTCATGTGC TGACATAATA ACACTAGCAA CTAGAGATGC TGTAGCGTTA GCTGGAGGTC CTAGTTATGC AATTCCAACT 
GGAAGGCGAG ACGGCCTAGT TTCAAATGAA GCA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TTTCATGACT GCTTTGTGAG AGGCTGTGAC GCATCCATAC TCATTAAGTC AACAAAGTCT AAGAAATCAG AGAGAGACGC TGGACCAAAC CAAACGGTAC GAGGTTTTGA GTTGATCGAT  ACAATCAAGA AAAGCCTAGA AACTGCTTGC CCATCAACCG TTTCATGTGC TGACATAATA ACACTAGCAA CTAGAGATGC TGTAGCGTTA GCTGGAGGTC CTAGTTATGC AATTCCAACT 
GGAAGGCGAG ACGGCCTAGT TTCAAATGAA GCA 

Retrieve as FASTA