Entry information : CroPrx56 (cra_locus_61465_iso_1_len_300_ver_3)
Entry ID 11322
Creation 2012-09-17 (Christophe Dunand)
Last sequence changes 2012-09-17 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2012-09-17 (Christophe Dunand)
Peroxidase information: CroPrx56 (cra_locus_61465_iso_1_len_300_ver_3)
Name (synonym) CroPrx56 (cra_locus_61465_iso_1_len_300_ver_3)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Apocynaceae Catharanthus
Organism Catharanthus roseus    [TaxId: 4058 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CroPrx56
start..stop
S start..stop
StPrx09 183 2e-59 1..99 210..308
LePrx28 167 3e-53 1..99 211..309
NtPrx09-1A 151 6e-47 1..99 207..306
NtoPrx01 147 1e-45 1..99 207..306
Literature and cross-references CroPrx56 (cra_locus_61465_iso_1_len_300_ver_3)
Protein sequence: CroPrx56 (cra_locus_61465_iso_1_len_300_ver_3)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   99
PWM (Da):   %s   10978.3  
PI (pH):   %s   4.97
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

NGSGRPDPTI DPTYLKTLQR ICPKAGNGVT FANLDKSTPD EFDNYYYTNL KNHQGLLQTD QELFSTSGSD TIAIVDNYAK NQHKFFDDFV CSMIKLGNI 

Retrieve as FASTA  
Remarks Partial sequence from EST. Two contigs: cra_locus_61465_iso_2_len_290_ver_3
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AATGGAAGTG GTAGACCTGA TCCTACCATA GACCCTACTT ATTTAAAAAC ACTACAAAGA ATTTGTCCAA AAGCTGGAAA TGGGGTTACT TTTGCAAATC TTGATAAATC AACTCCAGAT  GAATTTGATA ATTACTATTA TACAAATCTT AAAAATCATC AAGGGCTACT TCAAACTGAT CAAGAATTGT TTTCTACATC TGGATCAGAT ACAATTGCAA TAGTGGACAA TTATGCAAAA 
AACCAACACA AGTTCTTTGA TGATTTTGTT TGCTCAATGA TTAAATTGGG AAATATA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AATGGAAGTG GTAGACCTGA TCCTACCATA GACCCTACTT ATTTAAAAAC ACTACAAAGA ATTTGTCCAA AAGCTGGAAA TGGGGTTACT TTTGCAAATC TTGATAAATC AACTCCAGAT  GAATTTGATA ATTACTATTA TACAAATCTT AAAAATCATC AAGGGCTACT TCAAACTGAT CAAGAATTGT TTTCTACATC TGGATCAGAT ACAATTGCAA TAGTGGACAA TTATGCAAAA 
AACCAACACA AGTTCTTTGA TGATTTTGTT TGCTCAATGA TTAAATTGGG AAATATA 

Retrieve as FASTA