Entry information : CroPrx63 (cra_locus_56619_iso_1_len_1030_ver_3)
Entry ID 11329
Creation 2012-09-18 (Christophe Dunand)
Last sequence changes 2012-09-18 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2012-09-18 (Christophe Dunand)
Peroxidase information: CroPrx63 (cra_locus_56619_iso_1_len_1030_ver_3)
Name (synonym) CroPrx63 (cra_locus_56619_iso_1_len_1030_ver_3)
Class Class III peroxidase     [Orthogroup: Prx030]*
Taxonomy Eukaryota Viridiplantae Streptophyta Apocynaceae Catharanthus
Organism Catharanthus roseus    [TaxId: 4058 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CroPrx63
start..stop
S start..stop
MePrx06 473 1e-169 20..319 26..323
LuPrx82 472 2e-169 2..319 7..322
PtPrx08 471 7e-169 18..319 25..324
StPrx03 471 8e-169 6..317 12..321
Literature and cross-references CroPrx63 (cra_locus_56619_iso_1_len_1030_ver_3)
Protein sequence: CroPrx63 (cra_locus_56619_iso_1_len_1030_ver_3)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   319 (295)
PWM (Da):   %s   36006.29 (33168.8)  
PI (pH):   %s   6.62 (6.18) Peptide Signal:   %s   cut: 25 range:25-319
Sequence
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Send to Peroxiscan
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MANKISSFFF LLLPLLLQFY YGKCEIELNY YKESCPKAED IIKEEVSKLY EKHKNTAVSW IRNLFHDCIL KSCDASLLLE NSDGIQSEKN SERNFGMRNF KYINTIKNAL ENQCPKTVSC  ADIIALSARE AVSLLGGPRI EMKTGRMDSK RSYLAEIENF IPNHNDSISL VLSRFQSAGI DTEGTVALLG AHSVGRVHCK NIVQRLYPKV DPTLDPSHAE YLKVRCPNPN PDPKAVEYAR 
NDRTTPMVLD NVYYKNILSH KGLLLVDEEL ATDTTTYPFV KKMADDNQYF LDQFSRALLI LSENNPISNS GVEGEVRVD 

Retrieve as FASTA  
Remarks Partial sequence from EST. Short 3' end is missing.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCCAACA AAATTTCTAG CTTCTTCTTT CTCTTATTAC CATTGCTCTT ACAATTCTAT TATGGTAAAT GTGAGATCGA ATTAAACTAC TACAAAGAAA GTTGTCCAAA GGCAGAAGAT  ATTATCAAAG AAGAAGTATC AAAATTATAT GAGAAACACA AGAATACTGC TGTTTCTTGG ATTAGAAATC TCTTCCATGA TTGTATCCTT AAATCATGTG ATGCATCATT GCTATTGGAA  AATAGTGATG GGATTCAATC TGAGAAGAAT TCTGAAAGGA ACTTTGGAAT GAGAAATTTC AAGTATATAA ATACAATCAA AAATGCCCTT GAGAATCAAT GTCCTAAAAC TGTTTCTTGT  GCTGATATTA TTGCTCTTTC TGCCAGAGAA GCTGTTTCTT TGTTAGGAGG ACCGCGTATT GAAATGAAAA CGGGGCGTAT GGATAGCAAG AGGAGCTATC TAGCTGAGAT TGAAAATTTC  ATCCCTAACC ACAACGATAG CATCTCACTT GTTCTCTCCC GTTTCCAATC TGCTGGCATT GATACCGAAG GAACAGTTGC CCTTTTAGGT GCACACTCAG TAGGACGAGT TCACTGTAAA  AACATCGTAC AAAGACTATA CCCGAAAGTC GACCCGACAT TGGATCCATC TCACGCTGAA TACCTAAAAG TCAGATGTCC GAATCCGAAT CCAGATCCGA AGGCAGTGGA ATACGCAAGA  AATGATCGGA CAACGCCAAT GGTACTGGAT AATGTTTATT ACAAGAACAT ATTGAGCCAC AAAGGATTAT TATTGGTCGA CGAAGAATTA GCGACTGATA CGACGACGTA TCCTTTTGTG 
AAGAAAATGG CAGATGATAA TCAATACTTT CTTGATCAAT TTTCTAGAGC TCTTTTGATT TTGTCCGAAA ATAATCCGAT TTCGAATTCG GGTGTGGAAG GAGAAGTTAG AGTGGAT 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TATATATATA TATATATATA TATGAGTTAT AGATCAGCCA AAATTATTAG TAGCATATTT TGAAGAACAA ATTATGGCCA ACAAAATTTC TAGCTTCTTC TTTCTCTTAT TACCATTGCT  CTTACAATTC TATTATGGTA AATGTGAGAT CGAATTAAAC TACTACAAAG AAAGTTGTCC AAAGGCAGAA GATATTATCA AAGAAGAAGT ATCAAAATTA TATGAGAAAC ACAAGAATAC  TGCTGTTTCT TGGATTAGAA ATCTCTTCCA TGATTGTATC CTTAAATCAT GTGATGCATC ATTGCTATTG GAAAATAGTG ATGGGATTCA ATCTGAGAAG AATTCTGAAA GGAACTTTGG  AATGAGAAAT TTCAAGTATA TAAATACAAT CAAAAATGCC CTTGAGAATC AATGTCCTAA AACTGTTTCT TGTGCTGATA TTATTGCTCT TTCTGCCAGA GAAGCTGTTT CTTTGTTAGG  AGGACCGCGT ATTGAAATGA AAACGGGGCG TATGGATAGC AAGAGGAGCT ATCTAGCTGA GATTGAAAAT TTCATCCCTA ACCACAACGA TAGCATCTCA CTTGTTCTCT CCCGTTTCCA  ATCTGCTGGC ATTGATACCG AAGGAACAGT TGCCCTTTTA GGTGCACACT CAGTAGGACG AGTTCACTGT AAAAACATCG TACAAAGACT ATACCCGAAA GTCGACCCGA CATTGGATCC  ATCTCACGCT GAATACCTAA AAGTCAGATG TCCGAATCCG AATCCAGATC CGAAGGCAGT GGAATACGCA AGAAATGATC GGACAACGCC AATGGTACTG GATAATGTTT ATTACAAGAA  CATATTGAGC CACAAAGGAT TATTATTGGT CGACGAAGAA TTAGCGACTG ATACGACGAC GTATCCTTTT GTGAAGAAAA TGGCAGATGA TAATCAATAC TTTCTTGATC AATTTTCTAG 
AGCTCTTTTG ATTTTGTCCG AAAATAATCC GATTTCGAAT TCGGGTGTGG AAGGAGAAGT TAGAGTGGAT 

Retrieve as FASTA