Entry information : CroPrx64 (cra_locus_61738_iso_1_len_479_ver_3 )
Entry ID 11330
Creation 2012-09-18 (Christophe Dunand)
Last sequence changes 2012-09-18 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2012-09-18 (Christophe Dunand)
Peroxidase information: CroPrx64 (cra_locus_61738_iso_1_len_479_ver_3 )
Name (synonym) CroPrx64 (cra_locus_61738_iso_1_len_479_ver_3 )
Class Class III peroxidase     [Orthogroup: Prx107]*
Taxonomy Eukaryota Viridiplantae Streptophyta Apocynaceae Catharanthus
Organism Catharanthus roseus    [TaxId: 4058 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CroPrx64
start..stop
S start..stop
LePrx21 309 1e-107 1..159 60..218
StPrx46 307 5e-107 1..159 60..218
NtPrx32-1B 306 3e-106 1..159 72..230
NtPrx32-1A 299 2e-103 1..159 72..230
Literature and cross-references CroPrx64 (cra_locus_61738_iso_1_len_479_ver_3 )
Protein sequence: CroPrx64 (cra_locus_61738_iso_1_len_479_ver_3 )
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   159
PWM (Da):   %s   17000.52  
PI (pH):   %s   9.09
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AIMRERRMGA SLIRLFFHDC FVDGCDAGIL LNDIPGRFQG EKSSPPNNNS VRGYEVIDQA KQRIKTMCPG AAVSCADILA LAARDSVAML GGMPYPVRLG RRDARTANFT GALTQLPAPF 
DDLNVQLTKF SAKGMSAREM VALAGAHTVG FARCVTMCD 

Retrieve as FASTA  
Remarks Partial sequence from EST. Short 5' and 3' end are missing.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GCTATTATGC GAGAGAGGCG AATGGGAGCT TCTCTTATTC GTCTATTCTT CCATGACTGC TTTGTCGATG GATGTGATGC GGGTATTCTT CTAAATGATA TTCCTGGAAG ATTCCAAGGA  GAAAAATCTT CACCACCAAA TAATAATTCA GTGAGAGGCT ATGAAGTAAT TGATCAGGCT AAACAAAGGA TCAAAACTAT GTGCCCTGGG GCAGCTGTTT CTTGTGCTGA TATCCTTGCC  CTTGCTGCTC GTGATTCTGT TGCAATGTTG GGAGGAATGC CATACCCAGT GAGACTAGGC CGAAGAGACG CTAGGACCGC GAATTTCACC GGTGCATTAA CCCAACTTCC AGCCCCATTC 
GACGATCTCA ACGTCCAATT AACCAAATTC AGCGCAAAGG GAATGTCCGC CCGAGAAATG GTCGCGTTAG CGGGGGCACA CACGGTAGGA TTCGCGCGGT GTGTGACAAT GTGTGAC 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GCTATTATGC GAGAGAGGCG AATGGGAGCT TCTCTTATTC GTCTATTCTT CCATGACTGC TTTGTCGATG GATGTGATGC GGGTATTCTT CTAAATGATA TTCCTGGAAG ATTCCAAGGA  GAAAAATCTT CACCACCAAA TAATAATTCA GTGAGAGGCT ATGAAGTAAT TGATCAGGCT AAACAAAGGA TCAAAACTAT GTGCCCTGGG GCAGCTGTTT CTTGTGCTGA TATCCTTGCC  CTTGCTGCTC GTGATTCTGT TGCAATGTTG GGAGGAATGC CATACCCAGT GAGACTAGGC CGAAGAGACG CTAGGACCGC GAATTTCACC GGTGCATTAA CCCAACTTCC AGCCCCATTC 
GACGATCTCA ACGTCCAATT AACCAAATTC AGCGCAAAGG GAATGTCCGC CCGAGAAATG GTCGCGTTAG CGGGGGCACA CACGGTAGGA TTCGCGCGGT GTGTGACAAT GTGTGAC 

Retrieve as FASTA