Sequence Properties
first value : protein
second value (mature protein)
|
Length (aa):  |
416 |
| PWM (Da): |
46560.13 |
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| PI (pH):
| 6.42 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MSSLRSVGCLASRYGARQIIRPAALTANVRKSIIMRRGYATAPPAGNNSSGSNPLLWIGCISLGAAYTYYQKKRAEQIDQAVHKDQLENTANASASASKTEEKKEDPKPKSESESKDNKDTKKEPTNKPDDSKKTAPEKEINYQQVYNDIAELLDSNEDYDDGSYGPVLLRLAWHSSGTYNKEDGSGGSNGGTMRFRAEAEHAANNGLQVARDLLEKHIKPKYPELSYGDMYTLGGVVAIQEGGPNIKWRPGRRDQGDNKCTPDGRLPDGSKKADHVRDIFYRMGFNDREIVALTGGHALGRCHLDRSGYDGPWQEAPTFFSNEYYKAITSREWVKRDLPNGLWQWVDKANPEVMMLPIEITMLEDEKLKPYFELYAKDTAVFFEDFANAFKKLIELGVPFTGDEKEYVFERLNM* |
Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (4 introns). Incorrect prediction from JGI (first exon is missing). |
DNA ►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTCTTCTTTACGCTCAGTTGGATGCCTAGCAAGTCGCTACGGAGCGCGTCAAATCATCCGCCCAGCAGCATTGACAGCCAATGTCCGTAAGTCAATCATCATGCGTCGCGGCTACGCA
ACAGCTCCTCCAGCAGGAAACAATAGCTCAGGCTCCAATCCTTTATTATGGATCGGTAAGTAGTGTAGCTATATAGGCTGCATGATAGACTCATCATGCGTGCGTGAACAGGTTGTATTT
CCCTTGGTGCTGCTTATACCTATTATCAAAAGAAGAGAGCAGAACAAATCGACCAAGCTGTTCACAAAGACCAGCTCGAGAATACTGCAAATGCATCTGCTTCAGCCTCCAAAACAGAGG
AGAAGAAGGAGGATCCTAAACCAAAGAGTGAATCAGAATCAAAAGACAACAAGGACACCAAAAAGGAACCCACCAACAAGCCTGATGATTCCAAAAAGACGGCTCCTGAGAAGGAGATTA
ATTATCAACAGGTCTACAATGACATTGCCGAGCTGCTAGACTCTAATGAAGAGTAAGTGTGTTGGTATCAAAAGGATAGGCAAAGTGTCTAATCAAGGTGTAGCTATGATGATGGATCGT
ACGGACCCGTTCTTTTGCGTCTTGCCTGGCATTCATCGGGCACCTACAATAAGGAAGATGGTTCTGGTGGCAGCAATGGTGGCACAATGCGTTTCAGAGCCGAGGCAGAACATGCTGCTA
ACAATGGCTTGCAAGTCGCTCGTGATCTTCTTGAAAAGCATATCAAGCCAAAGTATCCCGAACTTAGTTATGGTGACATGTACACCTTGGGTGGTGTCGTTGCTATCCAAGAGCTGGTGA
GTTTTGTAAATTTATTGCCTGGTCATCGAGTTCTGTACTGAACTGGATATATTTAGGGCGGCCCCAACATCAAATGGAGACCTGGTCGCAGAGATCAAGGCGACAACAAATGTACCCCAG
ATGGTCGTCTTCCTGACGGATCCAAGAAGGCTGATCATGTGCGTGATATCTTTTATCGTATGGTAAAGTTTGGCAAACGAAATCATGCGATTATCACCGAATACTTAACACTCTTCCTAT
TAGGGATTTAATGATCGTGAAATTGTTGCATTGACTGGCGGTCATGCTTTAGGCAGATGTCATTTGGATCGCAGTGGCTACGACGGACCATGGCAAGAAGCACCCACTTTCTTCTCCAAC
GAATATTACAAGGCCATCACCTCTCGTGAATGGGTCAAGAGAGATCTCCCCAATGGCTTGTGGCAATGGGTCGACAAAGCCAACCCCGAAGTCATGATGTTGCCTATTGAAATCACCATG
CTGGAGGATGAAAAGCTGAAGCCTTATTTCGAACTGTATGCAAAGGACACTGCCGTCTTCTTTGAAGATTTTGCCAATGCCTTTAAAAAGTTGATTGAATTGGGTGTGCCTTTCACAGGA
GACGAAAAGGAGTATGTTTTTGAAAGACTCAACATGTAA |
Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTCTTCTTTACGCTCAGTTGGATGCCTAGCAAGTCGCTACGGAGCGCGTCAAATCATCCGCCCAGCAGCATTGACAGCCAATGTCCGTAAGTCAATCATCATGCGTCGCGGCTACGCA
ACAGCTCCTCCAGCAGGAAACAATAGCTCAGGCTCCAATCCTTTATTATGGATCGGTTGTATTTCCCTTGGTGCTGCTTATACCTATTATCAAAAGAAGAGAGCAGAACAAATCGACCAA
GCTGTTCACAAAGACCAGCTCGAGAATACTGCAAATGCATCTGCTTCAGCCTCCAAAACAGAGGAGAAGAAGGAGGATCCTAAACCAAAGAGTGAATCAGAATCAAAAGACAACAAGGAC
ACCAAAAAGGAACCCACCAACAAGCCTGATGATTCCAAAAAGACGGCTCCTGAGAAGGAGATTAATTATCAACAGGTCTACAATGACATTGCCGAGCTGCTAGACTCTAATGAAGACTAT
GATGATGGATCGTACGGACCCGTTCTTTTGCGTCTTGCCTGGCATTCATCGGGCACCTACAATAAGGAAGATGGTTCTGGTGGCAGCAATGGTGGCACAATGCGTTTCAGAGCCGAGGCA
GAACATGCTGCTAACAATGGCTTGCAAGTCGCTCGTGATCTTCTTGAAAAGCATATCAAGCCAAAGTATCCCGAACTTAGTTATGGTGACATGTACACCTTGGGTGGTGTCGTTGCTATC
CAAGAGCTGGGCGGCCCCAACATCAAATGGAGACCTGGTCGCAGAGATCAAGGCGACAACAAATGTACCCCAGATGGTCGTCTTCCTGACGGATCCAAGAAGGCTGATCATGTGCGTGAT
ATCTTTTATCGTATGGGATTTAATGATCGTGAAATTGTTGCATTGACTGGCGGTCATGCTTTAGGCAGATGTCATTTGGATCGCAGTGGCTACGACGGACCATGGCAAGAAGCACCCACT
TTCTTCTCCAACGAATATTACAAGGCCATCACCTCTCGTGAATGGGTCAAGAGAGATCTCCCCAATGGCTTGTGGCAATGGGTCGACAAAGCCAACCCCGAAGTCATGATGTTGCCTATT
GAAATCACCATGCTGGAGGATGAAAAGCTGAAGCCTTATTTCGAACTGTATGCAAAGGACACTGCCGTCTTCTTTGAAGATTTTGCCAATGCCTTTAAAAAGTTGATTGAATTGGGTGTG
CCTTTCACAGGAGACGAAAAGGAGTATGTTTTTGAAAGACTCAACATGTAA |
Retrieve as FASTA
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