Sequence Properties
first value : protein
second value (mature protein)
|
Length (aa):  |
416 |
| PWM (Da): |
46560.13 |
|
| PI (pH):
| 6.42 |
|
Sequence 457
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MSSLRSVGCLASRYGARQIIRPAALTANVRKSIIMRRGYATAPPAGNNSSGSNPLLWIGCISLGAAYTYYQKKRAEQIDQAVHKDQLENTANASASASKTEEKKEDPKPKSESESKDNKDTKKEPTNKPDDSKKTAPEKEINYQQVYNDIAELLDSNEDYDDGSYGPVLLRLAWHSSGTYNKEDGSGGSNGGTMRFRAEAEHAANNGLQVARDLLEKHIKPKYPELSYGDMYTLGGVVAIQELGGPNIKWRPGRRDQGDNKCTPDGRLPDGSKKADHVRDIFYRMGFNDREIVALTGGHALGRCHLDRSGYDGPWQEAPTFFSNEYYKAITSREWVKRDLPNGLWQWVDKANPEVMMLPIEITMLEDEKLKPYFELYAKDTAVFFEDFANAFKKLIELGVPFTGDEKEYVFERLNM |
Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (4 introns). Incorrect prediction from JGI (first exon is missing). |
DNA ►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TGTCTTCTTTACGCTCAGTTGGATGCCTAGCAAGTCGCTACGGAGCGCGTCAAATCATCCGCCCAGCAGCATTGACAGCCAATGTCCGTAAGTCAATCATCATGCGTCGCGGCTACGCAA
CAGCTCCTCCAGCAGGAAACAATAGCTCAGGCTCCAATCCTTTATTATGGATCGGTAAGTAGTGTAGCTATATAGGCTGCATGATAGACTCATCATGCGTGCGTGAACAGGTTGTATTTC
CCTTGGTGCTGCTTATACCTATTATCAAAAGAAGAGAGCAGAACAAATCGACCAAGCTGTTCACAAAGACCAGCTCGAGAATACTGCAAATGCATCTGCTTCAGCCTCCAAAACAGAGGA
GAAGAAGGAGGATCCTAAACCAAAGAGTGAATCAGAATCAAAAGACAACAAGGACACCAAAAAGGAACCCACCAACAAGCCTGATGATTCCAAAAAGACGGCTCCTGAGAAGGAGATTAA
TTATCAACAGGTCTACAATGACATTGCCGAGCTGCTAGACTCTAATGAAGAGTAAGTGTGTTGGTATCAAAAGGATAGGCAAAGTGTCTAATCAAGGTGTAGCTATGATGATGGATCGTA
CGGACCCGTTCTTTTGCGTCTTGCCTGGCATTCATCGGGCACCTACAATAAGGAAGATGGTTCTGGTGGCAGCAATGGTGGCACAATGCGTTTCAGAGCCGAGGCAGAACATGCTGCTAA
CAATGGCTTGCAAGTCGCTCGTGATCTTCTTGAAAAGCATATCAAGCCAAAGTATCCCGAACTTAGTTATGGTGACATGTACACCTTGGGTGGTGTCGTTGCTATCCAAGAGCTGGTGAG
TTTTGTAAATTTATTGCCTGGTCATCGAGTTCTGTACTGAACTGGATATATTTAGGGCGGCCCCAACATCAAATGGAGACCTGGTCGCAGAGATCAAGGCGACAACAAATGTACCCCAGA
TGGTCGTCTTCCTGACGGATCCAAGAAGGCTGATCATGTGCGTGATATCTTTTATCGTATGGTAAAGTTTGGCAAACGAAATCATGCGATTATCACCGAATACTTAACACTCTTCCTATT
AGGGATTTAATGATCGTGAAATTGTTGCATTGACTGGCGGTCATGCTTTAGGCAGATGTCATTTGGATCGCAGTGGCTACGACGGACCATGGCAAGAAGCACCCACTTTCTTCTCCAACG
AATATTACAAGGCCATCACCTCTCGTGAATGGGTCAAGAGAGATCTCCCCAATGGCTTGTGGCAATGGGTCGACAAAGCCAACCCCGAAGTCATGATGTTGCCTATTGAAATCACCATGC
TGGAGGATGAAAAGCTGAAGCCTTATTTCGAACTGTATGCAAAGGACACTGCCGTCTTCTTTGAAGATTTTGCCAATGCCTTTAAAAAGTTGATTGAATTGGGTGTGCCTTTCACAGGAG
ACGAAAAGGAGTATGTTTTTGAAAGACTCAACATGTAA |
Retrieve as FASTA
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|
CDS►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TGTCTTCTTTACGCTCAGTTGGATGCCTAGCAAGTCGCTACGGAGCGCGTCAAATCATCCGCCCAGCAGCATTGACAGCCAATGTCCGTAAGTCAATCATCATGCGTCGCGGCTACGCAA
CAGCTCCTCCAGCAGGAAACAATAGCTCAGGCTCCAATCCTTTATTATGGATCGGTTGTATTTCCCTTGGTGCTGCTTATACCTATTATCAAAAGAAGAGAGCAGAACAAATCGACCAAG
CTGTTCACAAAGACCAGCTCGAGAATACTGCAAATGCATCTGCTTCAGCCTCCAAAACAGAGGAGAAGAAGGAGGATCCTAAACCAAAGAGTGAATCAGAATCAAAAGACAACAAGGACA
CCAAAAAGGAACCCACCAACAAGCCTGATGATTCCAAAAAGACGGCTCCTGAGAAGGAGATTAATTATCAACAGGTCTACAATGACATTGCCGAGCTGCTAGACTCTAATGAAGACTATG
ATGATGGATCGTACGGACCCGTTCTTTTGCGTCTTGCCTGGCATTCATCGGGCACCTACAATAAGGAAGATGGTTCTGGTGGCAGCAATGGTGGCACAATGCGTTTCAGAGCCGAGGCAG
AACATGCTGCTAACAATGGCTTGCAAGTCGCTCGTGATCTTCTTGAAAAGCATATCAAGCCAAAGTATCCCGAACTTAGTTATGGTGACATGTACACCTTGGGTGGTGTCGTTGCTATCC
AAGAGCTGGGCGGCCCCAACATCAAATGGAGACCTGGTCGCAGAGATCAAGGCGACAACAAATGTACCCCAGATGGTCGTCTTCCTGACGGATCCAAGAAGGCTGATCATGTGCGTGATA
TCTTTTATCGTATGGGATTTAATGATCGTGAAATTGTTGCATTGACTGGCGGTCATGCTTTAGGCAGATGTCATTTGGATCGCAGTGGCTACGACGGACCATGGCAAGAAGCACCCACTT
TCTTCTCCAACGAATATTACAAGGCCATCACCTCTCGTGAATGGGTCAAGAGAGATCTCCCCAATGGCTTGTGGCAATGGGTCGACAAAGCCAACCCCGAAGTCATGATGTTGCCTATTG
AAATCACCATGCTGGAGGATGAAAAGCTGAAGCCTTATTTCGAACTGTATGCAAAGGACACTGCCGTCTTCTTTGAAGATTTTGCCAATGCCTTTAAAAAGTTGATTGAATTGGGTGTGC
CTTTCACAGGAGACGAAAAGGAGTATGTTTTTGAAAGACTCAACATGTAA |
Retrieve as FASTA
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