Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
416 |
PWM (Da): |
46560.13 |
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PI (pH):
| 6.42 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MSSLRSVGCLASRYGARQIIRPAALTANVRKSIIMRRGYATAPPAGNNSSGSNPLLWIGCISLGAAYTYYQKKRAEQIDQAVHKDQLENTANASASASKTEEKKEDPKPKSESESKDNKDTKKEPTNKPDDSKKTAPEKEINYQQVYNDIAELLDSNEDYDDGSYGPVLLRLAWHSSGTYNKEDGSGGSNGGTMRFRAEAEHAANNGLQVARDLLEKHIKPKYPELSYGDMYTLGGVVAIQEGGPNIKWRPGRRDQGDNKCTPDGRLPDGSKKADHVRDIFYRMGFNDREIVALTGGHALGRCHLDRSGYDGPWQEAPTFFSNEYYKAITSREWVKRDLPNGLWQWVDKANPEVMMLPIEITMLEDEKLKPYFELYAKDTAVFFEDFANAFKKLIELGVPFTGDEKEYVFERLNM* |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (4 introns). Incorrect prediction from JGI (first exon is missing). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTCTTCTTTACGCTCAGTTGGATGCCTAGCAAGTCGCTACGGAGCGCGTCAAATCATCCGCCCAGCAGCATTGACAGCCAATGTCCGTAAGTCAATCATCATGCGTCGCGGCTACGCA ACAGCTCCTCCAGCAGGAAACAATAGCTCAGGCTCCAATCCTTTATTATGGATCGGTAAGTAGTGTAGCTATATAGGCTGCATGATAGACTCATCATGCGTGCGTGAACAGGTTGTATTT CCCTTGGTGCTGCTTATACCTATTATCAAAAGAAGAGAGCAGAACAAATCGACCAAGCTGTTCACAAAGACCAGCTCGAGAATACTGCAAATGCATCTGCTTCAGCCTCCAAAACAGAGG AGAAGAAGGAGGATCCTAAACCAAAGAGTGAATCAGAATCAAAAGACAACAAGGACACCAAAAAGGAACCCACCAACAAGCCTGATGATTCCAAAAAGACGGCTCCTGAGAAGGAGATTA ATTATCAACAGGTCTACAATGACATTGCCGAGCTGCTAGACTCTAATGAAGAGTAAGTGTGTTGGTATCAAAAGGATAGGCAAAGTGTCTAATCAAGGTGTAGCTATGATGATGGATCGT ACGGACCCGTTCTTTTGCGTCTTGCCTGGCATTCATCGGGCACCTACAATAAGGAAGATGGTTCTGGTGGCAGCAATGGTGGCACAATGCGTTTCAGAGCCGAGGCAGAACATGCTGCTA ACAATGGCTTGCAAGTCGCTCGTGATCTTCTTGAAAAGCATATCAAGCCAAAGTATCCCGAACTTAGTTATGGTGACATGTACACCTTGGGTGGTGTCGTTGCTATCCAAGAGCTGGTGA GTTTTGTAAATTTATTGCCTGGTCATCGAGTTCTGTACTGAACTGGATATATTTAGGGCGGCCCCAACATCAAATGGAGACCTGGTCGCAGAGATCAAGGCGACAACAAATGTACCCCAG ATGGTCGTCTTCCTGACGGATCCAAGAAGGCTGATCATGTGCGTGATATCTTTTATCGTATGGTAAAGTTTGGCAAACGAAATCATGCGATTATCACCGAATACTTAACACTCTTCCTAT TAGGGATTTAATGATCGTGAAATTGTTGCATTGACTGGCGGTCATGCTTTAGGCAGATGTCATTTGGATCGCAGTGGCTACGACGGACCATGGCAAGAAGCACCCACTTTCTTCTCCAAC GAATATTACAAGGCCATCACCTCTCGTGAATGGGTCAAGAGAGATCTCCCCAATGGCTTGTGGCAATGGGTCGACAAAGCCAACCCCGAAGTCATGATGTTGCCTATTGAAATCACCATG CTGGAGGATGAAAAGCTGAAGCCTTATTTCGAACTGTATGCAAAGGACACTGCCGTCTTCTTTGAAGATTTTGCCAATGCCTTTAAAAAGTTGATTGAATTGGGTGTGCCTTTCACAGGA GACGAAAAGGAGTATGTTTTTGAAAGACTCAACATGTAA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTCTTCTTTACGCTCAGTTGGATGCCTAGCAAGTCGCTACGGAGCGCGTCAAATCATCCGCCCAGCAGCATTGACAGCCAATGTCCGTAAGTCAATCATCATGCGTCGCGGCTACGCA ACAGCTCCTCCAGCAGGAAACAATAGCTCAGGCTCCAATCCTTTATTATGGATCGGTTGTATTTCCCTTGGTGCTGCTTATACCTATTATCAAAAGAAGAGAGCAGAACAAATCGACCAA GCTGTTCACAAAGACCAGCTCGAGAATACTGCAAATGCATCTGCTTCAGCCTCCAAAACAGAGGAGAAGAAGGAGGATCCTAAACCAAAGAGTGAATCAGAATCAAAAGACAACAAGGAC ACCAAAAAGGAACCCACCAACAAGCCTGATGATTCCAAAAAGACGGCTCCTGAGAAGGAGATTAATTATCAACAGGTCTACAATGACATTGCCGAGCTGCTAGACTCTAATGAAGACTAT GATGATGGATCGTACGGACCCGTTCTTTTGCGTCTTGCCTGGCATTCATCGGGCACCTACAATAAGGAAGATGGTTCTGGTGGCAGCAATGGTGGCACAATGCGTTTCAGAGCCGAGGCA GAACATGCTGCTAACAATGGCTTGCAAGTCGCTCGTGATCTTCTTGAAAAGCATATCAAGCCAAAGTATCCCGAACTTAGTTATGGTGACATGTACACCTTGGGTGGTGTCGTTGCTATC CAAGAGCTGGGCGGCCCCAACATCAAATGGAGACCTGGTCGCAGAGATCAAGGCGACAACAAATGTACCCCAGATGGTCGTCTTCCTGACGGATCCAAGAAGGCTGATCATGTGCGTGAT ATCTTTTATCGTATGGGATTTAATGATCGTGAAATTGTTGCATTGACTGGCGGTCATGCTTTAGGCAGATGTCATTTGGATCGCAGTGGCTACGACGGACCATGGCAAGAAGCACCCACT TTCTTCTCCAACGAATATTACAAGGCCATCACCTCTCGTGAATGGGTCAAGAGAGATCTCCCCAATGGCTTGTGGCAATGGGTCGACAAAGCCAACCCCGAAGTCATGATGTTGCCTATT GAAATCACCATGCTGGAGGATGAAAAGCTGAAGCCTTATTTCGAACTGTATGCAAAGGACACTGCCGTCTTCTTTGAAGATTTTGCCAATGCCTTTAAAAAGTTGATTGAATTGGGTGTG CCTTTCACAGGAGACGAAAAGGAGTATGTTTTTGAAAGACTCAACATGTAA |
Retrieve as FASTA
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