View Redoxidase 11378

Entry information : EguAPx-R

Entry ID	11378
Creation	2012-12-05 (Qiang Li)
Last sequence changes	2013-02-11 (Qiang Li)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2016-04-06 (Christophe Dunand)

Peroxidase information: EguAPx-R

Name

EguAPx-R

Class

Ascorbate peroxidase related [Orthogroup: APx-R001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus

Organism

Eucalyptus gunnii [TaxId: 3933 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	EguAPx-R start..stop	S start..stop
EgrAPx-R	692	0	1..342	1..342
EglAPx-R	692	0	1..342	1..342
EcamAPx-R	685	0	1..342	1..341
CsAPx-R	453	1.88e-161	16..342	10..335

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '11378' 'join(24064..24295,24377..24458,25069..25196,25727..25797,25980..26022,26099..26195,26366..26449,27008..27129,27490..27556,28004..28106)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	24064..24295	230	N° 2	24377..24458	80	N° 3	25069..25196	126	N° 4	25727..25797	69
N° 5	25980..26022	41	N° 6	26099..26195	95	N° 7	26366..26449	82	N° 8	27008..27129	120
N° 9	27490..27556	65	N° 10	28004..28106	101
join(24064..24295,24377..24458,25069..25196,25727..25797,25980..26022,26099..261 95,26366..26449,27008..27129,27490..27556,28004..28106)

Literature and cross-references EguAPx-R

Protein sequence: EguAPx-R

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	342
PWM (Da):	36327.28
PI (pH):	7.09

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MASPSPSTTHLSPLTCCCSSSSLSSHHSSRRTKFEFPANSQRSSPSPIASRAGAIASPSSSTPGAASSGDHAPVRGRSVAGLAATLPFLLQLRGYTEGIVADAAELDNDEYTMIKEEVRK
VVSKVKAAGVLRLVFHDAGTFEMGENSGGMNGSIVYELERPENAGLKKPVKILEKAKGEVDAKRPVSWADMIAVAGAEAVSVCGGPTIPVVLGRLDSMKPDPEGRLPEETLDALGLxQCF
QRKGLSTQELVALSGAHTLGSKGFGNPVVFDNSYYKVLLEKPWMSSAGMPSMIGLPSDRALVEDNECLRWIEKYANDQNLFFKDFENAYVKLVNSGARWRSL

Retrieve as FASTA

Remarks

Complete sequence from genomic. Scaffold_3_8466 (24064..28106).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTTCACCGTCGCCGTCGACGACCCACCTCTCCCCACTCACCTGCTGCTGCTCCTCCTCCTCCCTTTCCTCCCATCACTCTTCTCGCAGGACGAAATTCGAATTCCCCGCCAATTCC
CAACGGTCTTCTCCCTCCCCCATCGCCTCTCGCGCCGGAGCCATCGCCTCTCCCTCAAGCTCGACCCCCGGCGCCGCTTCTTCCGGTGACCACGCCCCCGTGCGCGGTCGATATGTTTCG
CGAATCCGGTCGATCGCGATCTTTCGGAGCTCNCAGCTGGAGACCGCGTCTCGAGGAGGAGGAGGAAGCTCATAGCCGTGGCGGGCCTGGCGGCCACATTGCCGTTTCTCCTTCAGCTGC
GCGGTTACACGGAGGGAATCGTCGCCGACGCCGCCGAGAGTAAGCTCGACGCTCTTTGCTTGACGAAAGTCCATGTCTTTATTGGTTGGAACGAATGAAACGGGAATTTCGAGGGAGATT
GAGATGCTTTTGAGCTTTGGAGTTGAGCCTGCGGAGCGAAAGAAGGCTATGCGTTTTCGTCGGTGGTCGGATTATGGGTTTTGCAGCTGCTTCTTCCGGTGATCAGTTTGTGTGTATGTG
TGCATGCTACGGAGTTGTCCCGCCGAAATGACGCTTTTTGCTTCCTTTGAAGGACTTACTTGCCGTTTAAAGTAGGAGNTCCAGGTGTGGTCCTTCGGATTATGAGATTTTAGTTTGTGT
TTCCGGNTNGCTCATTCACTGACTTCCTGGATTTTAGTATCTGTAAGCTGTAACTGTGAATTGTCTTGTTTCTCAACATTGATGTTATGGACACCGCATTCAGCTGGGGAAAAACCATTT
TGGGTGATGGTTTGATGGGTCGAAATTGCGATTCGGAAGTACTANTTGGATAGGGCTGTGAGTTTGATATTTTGTTTATCGTGACCTTGGGGCTGCATCTGTATTTGTGTTGACTTGGGG
CATTTGGATATGTCCATGANTGTTGGTTTTTCATGTTCGTATATCAAAGATTAGATAATGATGAATACACGATGATAAAGGAAGAGGTCAGAAAGGTAGTTTCCAAGGTGAAGGCTGCTG
GTGTGCTTCGTTTGGTATTTCATGATGCTGGAACCTTTGAAATGGGTGAAAACTCAGAGGTATTTTACATGGACAGCAAGTTAAAGTTCTACAAATAATGATACTCGACATCAGTAACTG
TGCTCCATATCTCTGGCTACAANTTTTGAATGCCTACTAATCGATCCAAATTGTTTTATCCTCTTTTCCCCATAATTGAACTTTTGAGCTGAAGCTAAGATGATGCATATATTGATTTTA
TCTGAATTAGGGGGATATAGCTCTCATTTNCCAAAAAAGTTAGATAATCCCTGTAAATGGGCATAACTTTTTTTTGTCATGGTGGTTTACTAAATGAACAAGGGCAAGTAATTCTATGAC
TGTTAAAGCAACNACAGACTCTAATGGACCTTTATAAATGAATGATCAATCATAGAGAGCAGTATCATTCATACTACCTGTATTTGTGAACTAATGGTCATGTCCGATTCTTTTAATGCA
TGCACATACTTCTTTTGAGTTGAAAATTTTCTGCGTCATGCTTTTTTGTCTGAGTATGGATTTCAATCCTCATATTGTAATTCTAATATGTTTTTGTGTCAATATCCAGGTGGTATGAAT
GGTTCCATAGTTTATGAACTTGAAAGGCCTGAAAATGCTGGGCTAAAAAAGCCTGTGAAGAGGTATGTTTTCTTTTATTACATCCTCAAGCTTAGCATCCATTCTGGAGATGCAACATTT
CATTTCAACTGGTGTACNCCCTCATGCATTTCTGGACTGCTAGAAGTTCCTGTNTCTTATGTCTAGAACAGTCAACTCCGGTTCATCTTCAGGCTAACTCGTCAGTCATTGTNTTGNTGT
TTAGATACTAGAGAAAGCAAAGGGTGAGGTGGATGCAAAGAGACCAGAGGTGATTTTTTTGAGTGTTATATTCTATATGCTGATGGTATGATTGTGGTGATATAGATGGAACTTTCCTCT
CTCAGTATCCTGGGCAGACATGATAGCTGTGGCTGGAGCTGAAGCAGTTTCTGTTTGTGGAGGTCCAACTATTCCAGTTGTTCTGGGCAGACTTGACTCAATATGTAAGAAGNTATTTCC
AATTCANTTACTACTGTTCTGAAGATGCGTTGATGGCAGANAAAACATTATTTCACTCATTTAGTATTGTCANTATTGCAAGATTCTTTGCATGTCTCCATCTTTGTGCATAGTCCCAAG
CTAATATTGGTNTGGTTTCATTTCTTTATTGAAGGAAGCCTGATCCTGAAGGAAGACTTCCCGAAGAAACTCTTGATGCTTTGGGTTTAANGCAGTGTTTTCAGAGGAAGGGCTTATCTC
GTGAGTTGCTATCCCATGTACATGTTGAATGATGCTTGCAAATTAAATGAAGTATTGTTTATTGACTATTGCATATTGTTATGCATCTTACTGCTGATGGTTAAACTGTTTAATAGATAT
TTCACCGGTCAACATAGAATTGGTTGTTTAGTCAACTGTGATACATTATGTTTTGCAATTACAGGATGATAGATTCAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNACACACACACAAAACAACCCCAAAAAAGCAAGACAACTATGCTTCCTTCTGTGGCAATAAGCATTCCTTCTTTGTTTTTCCCCTCCATTCCAAAAAAATTATGCCCCCTCTATGAGTT
ATTATTCTGACAGTATTAGCTGCATGATTACAAAAATGAAGCTTTCAAAACAGACTAAGAACATGTTTGATTGTTCCTGCTATGGACTCTGTTTGATTTTTTTTTGCTATAGANATCTGT
CCTTTCAGTTTCTTANACTATTCTGTAGTTTCTTCTCTCAGCAAAAGGAACATANTGATGTTGTCCTCATCCTCTCAGGACACAGGAACTTGTTGCATTATCTGGAGCCCATACCCTCGG
CAGTAAAGGTTTTGGGAATCCGGTTGTTTTTGACAATTCATACTACAAGGTTCTTCTAGAGAAACCCTGGATGTCTTCAGAGGTAGCGAAAAAACATTGATGGTTCTCATGTTCTTCTGT
TAGACTTTTTGCCGGACGTAGTTACGTTGGCCTGCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTTGGCCTGCCATCAGCTTTCTAACCCAGGAAAAGATTCTATA
TCTGATACTATGGAGTCATAATTGTGGTATTGTTTCAATAGTTAGCTCTGNTCCAGTGGAAATTTATTTAGTCTGTACTGGGAAAAGGTTATTCTCACTTTTTCTGTTGCAAAACCAACC
TGAGTTTTTCTCATCGGTAATAGTTCACACTTAAGCTTTGCTCTTAATTATCCCTTGCTTAATTTCCTTTTTCTCAATGCAGCTGGTATGCCGAGTATGATTGGACTTCCTTCTGATCGT
GCACTTGTTGAGGACAATGAATGCTTAAGAGGTTACTGATTTGATATCCCTACTATTTCCTTTTTACTAGGAAGATGGGAACAGTTTAGCCATATCTTTCTGGCCATAGACTATTATGGT
GAGATATATATATATCGCTGTCACTGGCACTTGTCAACTTTCAGGGATGCACCATTATTGCCACTTTTGATTTTCTTTTTCTCATGATTCTGGATAAAAGTTGGCTTTTGTCTTAATGAT
CCAGTTAAATCCACATTCCATAAATATGGGAGGTGCTATATTATCATGGCCTGTTTATGCTTCTGAGAAAGCAATGTAGAATGGAAATGTGCCGACACAACAAACATAAGTAGCCAGTCT
GAAGTAATTAGTATCACCTGATTTACTATGGATATTTTGCATGAGAATGTTCTGTTTAATGTGATATTTATTCCTTTCATTTGCTCGATCATGATACTTATATATTTTATATATACAGAT
GGATTGAGAAATATGCAAATGATCAGAACTTGTTCTTCAAAGATTTTGAGAATGCTTATGTCAAGTTAGTGAATTCTGGTGCAAGGTGGAGGAGCTTGTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA