View Redoxidase 11381

Entry information : EguAPx[P]05

Entry ID	11381
Creation	2012-12-05 (Qiang Li)
Last sequence changes	2013-01-22 (Qiang Li)
Sequence status	theoretical translation / pseudogene
Reviewer	Christophe Dunand
Last annotation changes	2016-04-07 (Christophe Dunand)

Peroxidase information: EguAPx[P]05

Name

EguAPx[P]05

Class

Ascorbate peroxidase [Orthogroup: N/D] N/D

Taxonomy

Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus

Organism

Eucalyptus gunnii [TaxId: 3933 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	EguAPx[P]05 start..stop	S start..stop
EgrAPx[P]05	257	1.53e-90	1..132	1..132
EgrAPx[P]06	256	5.58e-90	1..132	1..132
EglAPx[P]06	248	4.85e-87	1..124	1..124
EgrAPx[P]04	228	1.89e-78	1..117	40..156

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '11381' 'complement(join(5634..5798,6376..6478,6568..6647,6734..6784))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	6734..6784	49	N° 2	6568..6647	78	N° 3	6376..6478	101	N° 4	5634..5798	163
complement(join(5634..5798,6376..6478,6568..6647,6734..6784))

Literature and cross-references EguAPx[P]05

Protein sequence: EguAPx[P]05

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	132 (176)
PWM (Da):	13983.23 (19464.9)	Transmb domain:	i109-131o
PI (pH):	4.72 (7.18)	Peptide Signal:	cut: 27 range:27-202

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MGLSDKDIVALSGAHTLGRAHQERSGFDGPWTQEPLEFDNSYFVELLKGEAEGLLKLPTDKALLENPAFRPYVELYADEDAIFRDYAISHKKLSELGFTPSSSGSKTVANGAILAQGAVGVAVAAAVVILS*

Retrieve as FASTA

Remarks

Pseudogene sequence from genomic (3' end is missing). Scaffold_5_14900 (6784..5634).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGGTCTCTCGGACAAGGACATAGTGGCCTTATCAGGGGCTCATACACTGGTAATTTCTATTTCTGCTTGGATTTACATTCAAGGTCAGCTGGGGATGCGTAACCACACTTGTTATTTT
TTTATTCTTGTGTCAAGGGGGAAGGGCACACCAGGAAAGATCTGGATTTGATGGTCCTTGGACTCAGGAACCCCTTGAGTTTGATAATTCCTATTTTGTGTAAGATTTCATCTTTTCACT
GGATGCATTTTCTAAGTTTCGGCTGGAGCATTATAGAGCCAGATACTAATTGATCATTTTTGACACAGCGCGAGTTGTTGAAAGGGGAAGCAGAGGGGCTGCTGAAACTGCCAACTGACA
AGGCATTGCTGGAAAATCCTGCATTTCGCCCTTATGTTGAGTTGTATGCGAAGGTAAATAAGCTTTTCGCGTGGTCTNGTGACTCCATCGATAAATCTATAAAATTGAATTGCAGTTACA
TGGTTTCCTTTTGTAAATTTGTTTTTGATGAAACTACCCTGCCCACACCACTATTTCGTTTCCTTATGCTCATGGTCTATAACCCTTTGATGCTACTGTCCTTGGTTTTGCCGAGAATGA
AAAGAGATGGAAAGTGTTTTTCATGGAATTTATGCTGTGTAGGCTTGTGATGCTTAAAAGTAAGCATTNAGTATGTTCCATCACTATCTTCTATGTAGAGACCAGGAAATATTCATGATG
AGATCGCACATCAAATGTTGGGTAGATACATACATGTGTTGGGATGGATATATTATGTGGTTCCCTGAAACCTCTAGGCTAGAGCATCATCTTTGTGCTACTGGGAACACTTGATTTGAT
ATTTGAATTGGTTGTTGTTCCCGCAACTCTCTCATGGTGGTTGGCACGACCTTGAAAAGAGACAAACGGACAATTTGATACCGTGCTTCTTTTCCTCGTTTTCTTTTGCTATATGCTCTT
CTTTCCCTAATGTTGTCAAGCATGTGGCANGAGATGAGGATGCAATTTTCAGAGATTATGCAATCTCGCATAAGAAGCTCTCTGAACTGGGGTTCACGCCAAGTTCTTCAGGCAGCAAGA
CAGTAGCGAATGGTGCCATATTGGCACAAGGTGCTGTTGGAGTGGCAGTGGCTGCGGCTGTGGTGATCTTGAGCTAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGGTCTCTCGGACAAGGACATAGTGGCCTTATCAGGGGCTCATACACTGGGAAGGGCACACCAGGAAAGATCTGGATTTGATGGTCCTTGGACTCAGGAACCCCTTGAGTTTGATAAT
TCCTATTTTGTCGAGTTGTTGAAAGGGGAAGCAGAGGGGCTGCTGAAACTGCCAACTGACAAGGCATTGCTGGAAAATCCTGCATTTCGCCCTTATGTTGAGTTGTATGCGAAGGATGAG
GATGCAATTTTCAGAGATTATGCAATCTCGCATAAGAAGCTCTCTGAACTGGGGTTCACGCCAAGTTCTTCAGGCAGCAAGACAGTAGCGAATGGTGCCATATTGGCACAAGGTGCTGTT
GGAGTGGCAGTGGCTGCGGCTGTGGTGATCTTGAGCTAG

Retrieve as FASTA