Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
400 (200) |
| PWM (Da): |
43863.58 (21244.6) |
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| PI (pH): |
7.1 (8.50) |
Peptide Signal: |
cut: 25 range:25-224 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASEVTSPLA SRQLSFRVKA YWSFLAFHPY TSFCCWCVAI SMCIGRNCSS VVHARGACAK GFFEVTHDIS HLTHADFLQA PGVQTPVTVR FSILIHERGG PETLRDPRGS xVNFYTRxEG
NFDLVGNNFP IFFIRxGMKF PDMVRALRPN PKSRVQENWR ILDFFFHHPE SLRLFTFLFD DxxSAQDYRH MQGSGVNTYT LINQLAGQEL AGGRGN*SRG IQSQPCNSGF xDSIAAGNYP
EWKLFVQIVN PDHEDNFDFG PLDGAKTWPE DILPLMPVGR LVLNRNIDNF FAENEQLALH FxPSIVVPGV YDSDxDxKLL QPxPxSPPNT RKCAHHNNHP EGFTNFMHRD EEINYFPSRx
xPVCHGERYP IPPAMLTGKH EKTIIEKENN FKQLGERCRS *T
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Retrieve as FASTA
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| Remarks |
Pseudogene from genomic (3' end is missing, Stops in frame). Scaffold_6_22058 (122..2288). |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTAGTG AGGTCACCTC ACCTCTGGCC AGTCGTCAGC TATCATTCCG AGTCAAGGCA TATTGGAGTT TTCTGGCTTT TCATCCTTAT ACATCATTCT GTTGTTGGTG TGTAGCCATT
AGCATGTGCA TAGGAAGAAA TTGCTCGGTG AACTACTCTG AGTCAAGGCA TAAACTAACC AAATTCATCA AGACACAGTA GAACCTAATT TTAGAGTAAC GCTAAACGTG GAATATGCTT
ATGGCAAACT ATCATCTACG TCATAGGTCC AATTCTTCTT GACGATTATC ACCTCnTGGA GAAACTTGCC AACTTTGATA GGGAGAGGAT TCCATAGAGT GTTGTCCATG CCAGGGGAGC
CTGCGCAAAG GGATTCTTTG AGGTCACTCA TGACATTTCT CACCTTACCC ATGCCGATTT CCTTCAGGCA CCAGGAGTTC AAACACCTGT GACTGTCCGT TTCTCCATCC TCATCCACGA
AAGGGGCGGC CCTGAAACCC TGAGGGACCC CCGGGGTTCT CnTGTGAACT TCTACACnAG AnAGGTGAGG GTCGTTTTGG TAGTAGACAT GAATGTGCAG TATGGACGGG CATGAGTATG
ATGCTCCCTG TGATGAATCC TTTCACGGGT GGCCTAAACT CGACCnATGC ATATGGCAGT TCTCTTGTCC ACATTGCATA CATTTGTTTT GnTGCACTTT GCTATGTGAT CTTACCTTTT
CTGTnACTGC AGGGTAACTT TGATCTGGTA GGAAACAATT TCCCTATCTT CTTTATCCGC nATGGGATGA AATTCCCGGA TATGGTTCGT GCACTTAGAC CAAACCCCAA ATCCCGCGTC
CAGGAGAACT GGAGGATCCT TGACTTTTTC TTCCACCATC CCGAGAGCTT GCGCTTGTTC ACCTTCCTCT TTGATGATAT nnnnAGTGCA CAAGATTACA GGCACATGCA GGGCTCTGGA
GTTAACACCT ACACTTTGAT CAACAAGGCC AGAAAAGCGC ATCATGTGAA GTTTCACTGG AAACCAACTT GCGGGTCAAG AGCTTGCTGG AGGAAGAGGC AATTAGAGTC GGGGGATCCA
ATCACAGCCA TGCAACTCAG GATTTTnTGA TTCCATTGCT GCTGGAAACT ATCCTGAATG GAAACTTTTC GTTCAGATTG TCAATCCTGA TCATGAAGAC AACTTCGACT TTGGCCCACT
TGATGGGGCT AAGACCTGGC CCGAGGACAT ATTGCCCCTA ATGCCAGTTG GCCGCTTGGT CTTGAATAGG AACATTGATA ACTTCTTTGC TGAGAATGAA CAGCTTGCAT TGCATTTTGC
nCCTTCAATT GTAGTTCCCG GCGTCTACGA TTCGGATnnn GATnnnAAGC TGCTCCAAAC TCGTCATCTC ATATTCTGAT ACTCGGAGGC ACTGTCTTGG ACCAAAATAT CATCAACTCC
CACCCCCCCC nnnCCCnCCT CCCCCCCCAA TACTCGTAAA TGCGCTCATC ACAACAATCA CCCTGAAGGT TTCACGAATT TCATGCATAG GGATGAAGAG GTAAGAATCG TCTTAGAATA
CTTCAGCAGC GATGCTCTGG GCAGCAnCTC TTGTGGATTT TTTGTTGATG TAACTnGACA TCGTGCTTTC CTATAAGCAT GTAGGCGTTG TnATGCAATC TGACATnTCA AnTGCGGATC
CTAAAGTGGC AGTGCGAATG TCCTCCCTCC TTTTGAnGAA GATTACTTTC TTAATTTTGC AAATGCACTA TGnACCTGAA ACATnCATAC ATGTTTACAT ATGTAGGAAA TGCCTnTCTG
CTATTATGTA AAATGATTAT CTGTTGAGCA AATGCTTAAT TTCCCTnTTG CAnATAAACT ATTTTCCATC AAGGTAnnAT CCCGTTTGTC ATGGAGAGAG GTATCCCATT CCACCTGCTA
TGCTGACTGG AAAGCATGAA AAGGTGTGTT TTTAGTTAGG ATCTCTTTTA CGTAAACAGA GATTGATTGT CTTGAGGTGC TTTCATGGCG ATGTCCATGG GATAGACTCA GCTTGTCCTA
GATGATCAAT TGAATTGCAG TGAGTAGTGC GACTGATGTA TGTGTTTGGA TTTTnTTTAC TTTTGTTGCT CCAAACAGAC CATCATTGAG AAAGAGAACA ACTTCAAGCA GCTCGGAGAG
AGATGCCGAT CATAGACA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTAGTG AGGTCACCTC ACCTCTGGCC AGTCGTCAGC TATCATTCCG AGTCAAGGCA TATTGGAGTT TTCTGGCTTT TCATCCTTAT ACATCATTCT GTTGTTGGTG TGTAGCCATT
AGCATGTGCA TAGGAAGAAA TTGCTCGAGT GTTGTCCATG CCAGGGGAGC CTGCGCAAAG GGATTCTTTG AGGTCACTCA TGACATTTCT CACCTTACCC ATGCCGATTT CCTTCAGGCA
CCAGGAGTTC AAACACCTGT GACTGTCCGT TTCTCCATCC TCATCCACGA AAGGGGCGGC CCTGAAACCC TGAGGGACCC CCGGGGTTCT CnTGTGAACT TCTACACnAG AnAGGAGGGT
AACTTTGATC TGGTAGGAAA CAATTTCCCT ATCTTCTTTA TCCGCnATGG GATGAAATTC CCGGATATGG TTCGTGCACT TAGACCAAAC CCCAAATCCC GCGTCCAGGA GAACTGGAGG
ATCCTTGACT TTTTCTTCCA CCATCCCGAG AGCTTGCGCT TGTTCACCTT CCTCTTTGAT GATATnnnnA GTGCACAAGA TTACAGGCAC ATGCAGGGCT CTGGAGTTAA CACCTACACT
TTGATCAACC AACTTGCGGG TCAAGAGCTT GCTGGAGGAA GAGGCAATTA GAGTCGGGGG ATCCAATCAC AGCCATGCAA CTCAGGATTT TnTGATTCCA TTGCTGCTGG AAACTATCCT
GAATGGAAAC TTTTCGTTCA GATTGTCAAT CCTGATCATG AAGACAACTT CGACTTTGGC CCACTTGATG GGGCTAAGAC CTGGCCCGAG GACATATTGC CCCTAATGCC AGTTGGCCGC
TTGGTCTTGA ATAGGAACAT TGATAACTTC TTTGCTGAGA ATGAACAGCT TGCATTGCAT TTTGCnCCTT CAATTGTAGT TCCCGGCGTC TACGATTCGG ATnnnGATnn nAAGCTGCTC
CAACCCnnnC CCnCCTCCCC CCCCAATACT CGTAAATGCG CTCATCACAA CAATCACCCT GAAGGTTTCA CGAATTTCAT GCATAGGGAT GAAGAGATAA ACTATTTTCC ATCAAGGTAn
nATCCCGTTT GTCATGGAGA GAGGTATCCC ATTCCACCTG CTATGCTGAC TGGAAAGCAT GAAAAGACCA TCATTGAGAA AGAGAACAAC TTCAAGCAGC TCGGAGAGAG ATGCCGATCA
TAGACA
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Retrieve as FASTA
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