Sequence Properties
first value : protein
second value (mature protein)
|
Length (aa):  |
234 |
| PWM (Da): |
24480.18 |
|
| PI (pH):
| 7.34 |
|
Sequence 275
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
VQGRGTRVESYSGSCPxAEAIIRSTIQAHFxSDPTVAPGLFFFFFNPSPPPMHFHDRFIQGCDGSVLINGPxAEKTAPPNHLLRGYELINDAKTQLEAACPSVVSCADILALPACNSVALDASIDPSFVSQLQSLCPQNGDGTRRVALNTGSPSRFDASFFxNLRSGRGVLESDQKLWTDASTKTFVQGFLSGRGxTQLDFNTEFAKSMVKMSKIGVKTGTDGEIRKICSAINx |
Retrieve as FASTA
|
|
| Remarks |
Pseudogene sequence from genomic (5' end is missing). Scaffold_9_33183 (1026..7140) |
DNA ►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TGCAAGGACGAGGTACGAGAGTAGAGTCCTACTCAGGTTCGTGTCCGCNTGCCGAGGCCATTATTAGGTCAACGATTCAAGCCCATTTCCNGTCCGATCCCACTGTGGCTCCTGGGCTGT
TTTTTTTTTTTTTTTTTTGGTCGGTCCTACGCTAATCCTGCTCTAACACTCACTCTCAGACTTTTGCCCTGCCTTCTTGTAGGGCGTGAGAGTCGAAACCCACTCCTGAAATGAAATCGT
CCCCACCCCAATCCCCCCTGAGAAGGTGGGGATTTGAACCCCTCACCTCCCCCTATGCACTTTCATGATCGCTTCATCCAGGGATGTGACGGTTCGGTTCTCATCAATGGGCCCAANGCT
GAGAAAACGGCGCCTCCGAACCATTTGCTGAGAGGATATGAATTGATCAATGACGCGAAGACCCAGCTCGAAGCTGCGTGTCCTAGTGTCGTTTCATGTGCTGATATTCTTGCTCTTCCA
GCCTGTAATTCCGTTGCTCTGTTATTTAATAGTCATGTGCTTCNATTTGTTAGAGNTCTCCNCTACAAGGTGCAAATCTCTGTGTGGATCAATTTCATTCACTTCCATGCAAATCTTGGG
CGAGGTCCATGATATATGTGAGGGTTCTGGACTGGACCTGGATTCCTTAATTTTCCGATAGATATAGTGATGCCCTTGATGCAAGGCCTAGTTTTGTTACTGGTTATCTACTAGCTGCAA
GGAGAATAACTAGTATCATTCAAGTATGCATATATTCCTCTTAGTTGCATACATTGGCAGTTGATGAGCATGATGGGAGAGTTGACTTGTATAAGACTAGGAGATTTAAGCCGTTTAAGC
AGATGCACAACACTTTTATTAGATAGCCAAATAAACTTTGGTAGCAACACTGAAGTTTAGCAAGACAGAAGTTAGGCCATGAAGACTAAGGACACGAATGATGTAGATTGATAACGTGAG
GAGTTGTAGATGAACCAATAACCATTAGGTTTTAACATGTGTGGTTGTTAGAGATCTTACCTTAGTTACAAATTTATCAGGTAAAGCTGAAGTCGTTTTTTCCACTCTCTATTTCTAGAC
TTTTAAATCTACCTGTTCAGGCTTCATGACTTTTGGGTTGAATTTCTGCTATGACTTACCATCAGGTTGAAAACACTATTGGAGAGTTAGGGTGCGTTTGTTTGCGTTTCTGTTTAAAAA
TTGTTCCAGGGAACAGAAATAGAAAAAAGTGTTTCTGTTCCTGGGAACAATTTCTGAACAAAAAAACGCGTTTGGTAAACTTGTTCCGGGAACAAAAAATAAATAGAAACACGTTTGGTA
AATTTGTATAATTTTTTTATTTCTTTTATTTTTTTCTTNTTTTTCCTTTTTTTCTTTTTTCTTTTTCCTTTTTTCTTTTTTCTTCTTTTGGCCGGTCGCCGGCCTCGGCCATGGCCGGCG
ACCGGCCGACGAGGGCCGGCGGCCTCGCCATAGCTGGGCGAGGGTCGGCCTCGCCTTGGCTGGGCGAGCTCGAGCTCGCCCAGATCCGGCGAGGCCGAGCTCGCCCAGCCCGACGCGCCG
ACATCTCGCCGGATCTGGGCGAGCTCGAGCTCGAGCTCGCCCAGCTACGGCGAGGCTCGGCCTCGCCGGGGGCCGGCGAGCCTCGCCGTGCCTGGGCGAGGCCGCCGGCCCTCGTCGGCC
GGTCGCCGGCCATGGCCGAGGCCGGCGACCGGCGAAAGAAAAAAGAAAGAAAATAAGAAGAAAAAGAAGAAAAATTTCAAAAGTGTTTCTGATTTGTGTTTCTTGTTTCTNTTTCTTTTT
TGTTCCTGGGAACAAAAGAACAAAAAAAACAGAAAAAGTGTTTAAAAACAAAAAAAAGAAATACAAACAAACGCAGCCTTATACTTTCGAGAAGTCAGTGCGACTGCGGGTGCTGTCACA
ATCACTTGCCTCATGGTCTGTCCATTGCTGTGTTCATGGCTTCGGCAATAGTCTCGTAGTATAATTTTACACGAGTTTTTGGTTTGGGCATTATATTGTATTGATAAAGACAAAGATGCC
ATTGGGCAAAGATGCCATTGGGCGTAAAAATCTCTTGGTCGTGGGTACATTTTTCTATTTCTTCACGAAAATATTTTTAATATCTTAACTTTTGGATTCATCTGTGTCAGGTTGCAAATC
TCGTTGGCTTTGTGATTGGACCATCTGGTATCAGTTGGTTAATTGCTCGATTCCTTCATAAAGAAGGTATATCCCAATGTTGCCACCTTTGCAAGAGCTAAACATGCATTGTCTGTAAAG
ATTGACTTTCTATTTTGGTGATAGTGCATCATTAACCATGTTACTCGATACATCTCCTAAGATTGATGCTCCAGTGCTCATTACATTTCAGCTCCATTTTTATCATCTAGAAATATGGTC
TCAAAGACAATCGATGCAGTCCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTGTTCCTTTTAAACTTTCAGG
CTGATATGGATCAAGTCTTTGAATAAGATAGATTGTCGATGTTATCAAAAGATTTCTTATGTGAAACTTTTGAAGCCTGCTGGTTGATAGCATAGGATAAATGGTGCAAGTTGTGCCTTT
GTCAAATAAGACATTCTTCAACCTGCCAGCCTCTCCAAGCTGTCCGCATGAAATGCAAAAGATTTAGGCAAAAGCTTTCTGCATGAGATACACAAGTTTAAGGCCAGTTGGACCATTACA
TATGTACTAGCTATCATTATTTCAGTTTTCCATTTTACACAGTAGTATTGGAGCAAGCTCCATTCTCGGTGAGCACTTCACAAGATCCAAGTCCGTTGATGCTTTGTTGATACTTAAGCC
AGTGCTAAATTGGTTTTGAGCTCATTTTTCCTCTCTATTGGCAATTAAAACTGTAACTAGAGTCTGGGAGGAGATGGATGGATGCTGCTCTAGTGGGCAAGCGGAGATCGTCAGCCGCTT
CTGATATCGCAGAGCTCTATTAGCATCTAAGAGATTCTGCCAAATTTGTCCTTTCATGTCACTATATATAGCATTTATTGGGGATTCTTGAACTTGAACGATTAGTTCTTGCTACTTGCG
GAGCTGTTATCTTTGTTTTCACCTGTCTTTTTTCCTTCTTATTCCCTCAATTTTGGANCTCCGGGCATTGATAGAGCATCCATCTTGCAGGATGCCTGTCCTTGATGGCATGTTTTTGAC
ATTCTATGTGGGGACCAAGGCAAGTTAGATATCAACTTATCTTTGCCATTAATTGGACAAAAGTGACCAGAGTGACNTATTTCCCTGTTTTGCAGCTCATGTTTNATATCCAGGATGCCA
AACGGAAAGGACGGTGAATCAGACACCATGATTTGAAAGGGTTGTACTCANTTGCACCACTGCACAGTAGGATTATTTAGCAATCGACCACGGAGAAGAGCATTGATGAAATTTCTGGAC
TTACTGACCTTGGCATCAGAGTTAACCTGGAAAGGCATTCCATTACGCCTCCCGGCACTCGGCGGTAGAGTCAGATTTGTTAGCCCTGTATGGACTGGTAACTCTTCAGTGCTCGTGAAA
GTTGGTGCTGCTGAGAGCTATTTTTGTATAACGTTGTTTTGTCCTAGTCAATTGGTTGTGATGTAACACATAGTTATCTATGCAATATAAATTAATCAGATACAGATGCACATGAAAATG
ATATCAGTCAGTTCGCTCTTTCAACATTTTTGAAATATCGAAATGAACGGGTAATAAGGCCATTTTTCTTTGTCGAAGTATTAAGGCCACTTATGAAGAATAGGAGTGTCTTTGATTTAT
AATCCCTGTACATTTACTTCAAATGTGCATTATTTTTACTCTTTTCGTGTCTACTATAAATTGGACAAGACATACTTAAATCCTTCATAGAGATAATATCTGAAAGAATAATACCTCAAG
TGTTAATACTTGGCACATATGGATATATAATTGCCAAATTTTTTAGAATTTACACTTAAGTGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC
AACTCCGGTATCTTTGTCCNCAAAACGGTGATGGCACGAGGCGTGTTGCCCTCGACACCGGCAGCCCTAGTCGTTTCGATGCATCCTTCTTTGCAAACTTGAGGAGCGGAAGGGGAGTTT
TGGAGTCTGATCAGAAGCTATGGACCGATGCCTCCACCAAAACCTTCGTGCAGGGCTTTCTAAGCGGNCANNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGTTTGCTAAATCGATGGTGA
AGATGAGTAACATTGGCGTGAAGACGGGGACCAATGGTGAAATTAGGAAAATATGCTCTGCCATTAATGCATGATTTAGATCATTAAAGATTATTGCATTTTGGTATTTCAGTGTTATCT
GTTGGAGTCCGCGTAAGCTGATTCGTGGTGCATTCTAATGAAAGAAGGGAACGTGTAGTACTTTATAATTATATAAAATTGATGGCTATCGTCTCAAAAATGAAAATCTTGACCATGAAT
TTCAAGATTTCTTATATTCTTGTTCTGGTGCCATTTGNTTTTTTATTCAAAACTAGATGTCGGTGGCTTATTTATTCTAGTAAATGTGTGACGATTGACATAATCTAAGGTTTTTAGTGG
TTTTAAAAAATGCATTTTATGATAAAACGTAACAAATCTTTATAGAATATAGTAACATATAGAAAATTATATTTTTGAATGTTTTGTATTTGATCATATTTTAACATCATAAATTCGCAA
GATTTGATATCTTTTCATTTACGTTCACAACTCTAAAAAGCGTCTTGCTAGGTGGTACAAAATCAATGACCTATCTTGTGCTCGACTTGGGTTCATTAATTTTTATTTTTATGAAATTGA
TTTATATTATTATAATGCCTTCATATAGAAAATTAAAATAGAGTAAAGTAATTTGACACAATTACGATATAATTAATAAAAAAACATGTATACACTTCGGTTGTTGGAAAATAATTCATT
ATATATAAGTTTTGATAACTTAATTTGTCTTTTTTTTTTCTCTTGTTATTCTGTACTTTATTTTGTTAGCCAACTATATATTTAATTATTAGGATCACCATTGTTATGTCAAGAAAATTT
CCATTTAAAGCTCTGTCACGCTTGTGATAGTGATGTGCGACTCATTTGCGACTTCCATGCCACTCGCATGCTTGTTCTGTAGCAACGTCAAAGATGCGAGGAACCCAATAGTGGAAGGAT
CTACATCGATGCGGCAAACACTAGTGTCATTCACTTTTCTAGAAACGCCCTGGAAAAAATGCAGATTCAACTAGTGGCATTTGCACTTTAATCACTACTGATATGCACCATGCGGACCGC
TGTCATAGGACCGCCACCCACAGCTCACCGGCCATCGCCCCCTCTCGTGGCCAATGGGCTGTGGGCGGCAATCTTGTGTCTGCGGCGGCGACGATTGGCGATCGTGCGCCGGTCGTGCGG
TGGTCGTGCGGCGTTCGTGCGACAATCGTGCGGCGGTCGTGCGGCGATCGTGCGATGGTCGTGCGGCAGTCGTGTGGTGACAGTCGGCGTAGATATAAATTTCTCATATGTCCATGTGCA
TCAAAAGGGATACACTAAGTTTCTTGCTTTTGACCAATACTTGATACAGGAGGGCACACCATAGGAACTGGAGCTTNCCAATTCTTCANCTACAGACTCTACAACTTCACCAATACTACG
TCAAGTGGAGCGGACGCTTCCATTGATCCTTCCTTTGTTTCTCAACTCCAGTCTCTGTGTCCGCAAAACGGTGATGGCACAAGGCGTGTTGCCCTCAACACCGGCAGCCCTAGTCGTTTC
GATGCATCCTTCTTCNCAAACTTGAGGAGCGGAAGGGGAGTTTTGGAGTCCGATCAGAAGCTNTGGACCGATGCCTCCACCAAAACCTTCGTGCAAGGCTTTCTAAGCGGCAGAGGCCNG
ACCCAGTTGGACTTCAACACGGAGTTTGCTAAATCGATGGTGAAGATGAGTAAGATTGGTGTGAAGACGGGCACCGATGGTGAAATTAGGAAAATATGCTCCGCCATTAATGNA |
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TGCAAGGACGAGGTACGAGAGTAGAGTCCTACTCAGGTTCGTGTCCGCNTGCCGAGGCCATTATTAGGTCAACGATTCAAGCCCATTTCCNGTCCGATCCCACTGTGGCTCCTGGGCTGT
TTTTTTTTTTTTTTAACCCCTCACCTCCCCCTATGCACTTTCATGATCGCTTCATCCAGGGATGTGACGGTTCGGTTCTCATCAATGGGCCCAANGCTGAGAAAACGGCGCCTCCGAACC
ATTTGCTGAGAGGATATGAATTGATCAATGACGCGAAGACCCAGCTCGAAGCTGCGTGTCCTAGTGTCGTTTCATGTGCTGATATTCTTGCTCTTCCAGCCTGTAATTCCGTTGCTCTGG
ACGCTTCCATTGATCCTTCCTTTGTTTCTCAACTCCAGTCTCTGTGTCCGCAAAACGGTGATGGCACAAGGCGTGTTGCCCTCAACACCGGCAGCCCTAGTCGTTTCGATGCATCCTTCT
TCNCAAACTTGAGGAGCGGAAGGGGAGTTTTGGAGTCCGATCAGAAGCTNTGGACCGATGCCTCCACCAAAACCTTCGTGCAAGGCTTTCTAAGCGGCAGAGGCCNGACCCAGTTGGACT
TCAACACGGAGTTTGCTAAATCGATGGTGAAGATGAGTAAGATTGGTGTGAAGACGGGCACCGATGGTGAAATTAGGAAAATATGCTCCGCCATTAATGNA |
Retrieve as FASTA
|
|
