Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
234 |
PWM (Da): |
24480.18 |
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PI (pH): |
7.34 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
VQGRGTRVESYSGSCPxAEAIIRSTIQAHFxSDPTVAPGLFFFFFNPSPPPMHFHDRFIQGCDGSVLINGPxAEKTAPPNHLLRGYELINDAKTQLEAACPSVVSCADILALPACNSVAL DASIDPSFVSQLQSLCPQNGDGTRRVALNTGSPSRFDASFFxNLRSGRGVLESDQKLWTDASTKTFVQGFLSGRGxTQLDFNTEFAKSMVKMSKIGVKTGTDGEIRKICSAINx |
Retrieve as FASTA
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Remarks |
Pseudogene sequence from genomic (5' end is missing). Scaffold_9_33183 (1026..7140) |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GTGCAAGGACGAGGTACGAGAGTAGAGTCCTACTCAGGTTCGTGTCCGCNTGCCGAGGCCATTATTAGGTCAACGATTCAAGCCCATTTCCNGTCCGATCCCACTGTGGCTCCTGGGCTG TTTTTTTTTTTTTTTTTTTTTGGTCGGTCCTACGCTAATCCTGCTCTAACACTCACTCTCAGACTTTTGCCCTGCCTTCTTGTAGGGCGTGAGAGTCGAAACCCACTCCTGAAATGAAAT CGTCCCCACCCCAATCCCCCCTGAGAAGGTGGGGATTTGAACCCCTCACCTCCCCCTATGCACTTTCATGATCGCTTCATCCAGGGATGTGACGGTTCGGTTCTCATCAATGGGCCCAAN GCTGAGAAAACGGCGCCTCCGAACCATTTGCTGAGAGGATATGAATTGATCAATGACGCGAAGACCCAGCTCGAAGCTGCGTGTCCTAGTGTCGTTTCATGTGCTGATATTCTTGCTCTT CCAGCCTGTAATTCCGTTGCTCTCTGTTATTTAATAGTCATGTGCTTCNATTTGTTAGAGNTCTCCNCTACAAGGTGCAAATCTCTGTGTGGATCAATTTCATTCACTTCCATGCAAATC TTGGGCGAGGTCCATGATATATGTGAGGGTTCTGGACTGGACCTGGATTCCTTAATTTTCCGATAGATATAGTGATGCCCTTGATGCAAGGCCTAGTTTTGTTACTGGTTATCTACTAGC TGCAAGGAGAATAACTAGTATCATTCAAGTATGCATATATTCCTCTTAGTTGCATACATTGGCAGTTGATGAGCATGATGGGAGAGTTGACTTGTATAAGACTAGGAGATTTAAGCCGTT TAAGCAGATGCACAACACTTTTATTAGATAGCCAAATAAACTTTGGTAGCAACACTGAAGTTTAGCAAGACAGAAGTTAGGCCATGAAGACTAAGGACACGAATGATGTAGATTGATAAC GTGAGGAGTTGTAGATGAACCAATAACCATTAGGTTTTAACATGTGTGGTTGTTAGAGATCTTACCTTAGTTACAAATTTATCAGGTAAAGCTGAAGTCGTTTTTTCCACTCTCTATTTC TAGACTTTTAAATCTACCTGTTCAGGCTTCATGACTTTTGGGTTGAATTTCTGCTATGACTTACCATCAGGTTGAAAACACTATTGGAGAGTTAGGGTGCGTTTGTTTGCGTTTCTGTTT AAAAATTGTTCCAGGGAACAGAAATAGAAAAAAGTGTTTCTGTTCCTGGGAACAATTTCTGAACAAAAAAACGCGTTTGGTAAACTTGTTCCGGGAACAAAAAATAAATAGAAACACGTT TGGTAAATTTGTATAATTTTTTTATTTCTTTTATTTTTTTCTTNTTTTTCCTTTTTTTCTTTTTTCTTTTTCCTTTTTTCTTTTTTCTTCTTTTGGCCGGTCGCCGGCCTCGGCCATGGC CGGCGACCGGCCGACGAGGGCCGGCGGCCTCGCCATAGCTGGGCGAGGGTCGGCCTCGCCTTGGCTGGGCGAGCTCGAGCTCGCCCAGATCCGGCGAGGCCGAGCTCGCCCAGCCCGACG CGCCGACATCTCGCCGGATCTGGGCGAGCTCGAGCTCGAGCTCGCCCAGCTACGGCGAGGCTCGGCCTCGCCGGGGGCCGGCGAGCCTCGCCGTGCCTGGGCGAGGCCGCCGGCCCTCGT CGGCCGGTCGCCGGCCATGGCCGAGGCCGGCGACCGGCGAAAGAAAAAAGAAAGAAAATAAGAAGAAAAAGAAGAAAAATTTCAAAAGTGTTTCTGATTTGTGTTTCTTGTTTCTNTTTC TTTTTTGTTCCTGGGAACAAAAGAACAAAAAAAACAGAAAAAGTGTTTAAAAACAAAAAAAAGAAATACAAACAAACGCAGCCTTATACTTTCGAGAAGTCAGTGCGACTGCGGGTGCTG TCACAATCACTTGCCTCATGGTCTGTCCATTGCTGTGTTCATGGCTTCGGCAATAGTCTCGTAGTATAATTTTACACGAGTTTTTGGTTTGGGCATTATATTGTATTGATAAAGACAAAG ATGCCATTGGGCAAAGATGCCATTGGGCGTAAAAATCTCTTGGTCGTGGGTACATTTTTCTATTTCTTCACGAAAATATTTTTAATATCTTAACTTTTGGATTCATCTGTGTCAGGTTGC AAATCTCGTTGGCTTTGTGATTGGACCATCTGGTATCAGTTGGTTAATTGCTCGATTCCTTCATAAAGAAGGTATATCCCAATGTTGCCACCTTTGCAAGAGCTAAACATGCATTGTCTG TAAAGATTGACTTTCTATTTTGGTGATAGTGCATCATTAACCATGTTACTCGATACATCTCCTAAGATTGATGCTCCAGTGCTCATTACATTTCAGCTCCATTTTTATCATCTAGAAATA TGGTCTCAAAGACAATCGATGCAGTCCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTGTTCCTTTTAAACTT TCAGGCTGATATGGATCAAGTCTTTGAATAAGATAGATTGTCGATGTTATCAAAAGATTTCTTATGTGAAACTTTTGAAGCCTGCTGGTTGATAGCATAGGATAAATGGTGCAAGTTGTG CCTTTGTCAAATAAGACATTCTTCAACCTGCCAGCCTCTCCAAGCTGTCCGCATGAAATGCAAAAGATTTAGGCAAAAGCTTTCTGCATGAGATACACAAGTTTAAGGCCAGTTGGACCA TTACATATGTACTAGCTATCATTATTTCAGTTTTCCATTTTACACAGTAGTATTGGAGCAAGCTCCATTCTCGGTGAGCACTTCACAAGATCCAAGTCCGTTGATGCTTTGTTGATACTT AAGCCAGTGCTAAATTGGTTTTGAGCTCATTTTTCCTCTCTATTGGCAATTAAAACTGTAACTAGAGTCTGGGAGGAGATGGATGGATGCTGCTCTAGTGGGCAAGCGGAGATCGTCAGC CGCTTCTGATATCGCAGAGCTCTATTAGCATCTAAGAGATTCTGCCAAATTTGTCCTTTCATGTCACTATATATAGCATTTATTGGGGATTCTTGAACTTGAACGATTAGTTCTTGCTAC TTGCGGAGCTGTTATCTTTGTTTTCACCTGTCTTTTTTCCTTCTTATTCCCTCAATTTTGGANCTCCGGGCATTGATAGAGCATCCATCTTGCAGGATGCCTGTCCTTGATGGCATGTTT TTGACATTCTATGTGGGGACCAAGGCAAGTTAGATATCAACTTATCTTTGCCATTAATTGGACAAAAGTGACCAGAGTGACNTATTTCCCTGTTTTGCAGCTCATGTTTNATATCCAGGA TGCCAAACGGAAAGGACGGTGAATCAGACACCATGATTTGAAAGGGTTGTACTCANTTGCACCACTGCACAGTAGGATTATTTAGCAATCGACCACGGAGAAGAGCATTGATGAAATTTC TGGACTTACTGACCTTGGCATCAGAGTTAACCTGGAAAGGCATTCCATTACGCCTCCCGGCACTCGGCGGTAGAGTCAGATTTGTTAGCCCTGTATGGACTGGTAACTCTTCAGTGCTCG TGAAAGTTGGTGCTGCTGAGAGCTATTTTTGTATAACGTTGTTTTGTCCTAGTCAATTGGTTGTGATGTAACACATAGTTATCTATGCAATATAAATTAATCAGATACAGATGCACATGA AAATGATATCAGTCAGTTCGCTCTTTCAACATTTTTGAAATATCGAAATGAACGGGTAATAAGGCCATTTTTCTTTGTCGAAGTATTAAGGCCACTTATGAAGAATAGGAGTGTCTTTGA TTTATAATCCCTGTACATTTACTTCAAATGTGCATTATTTTTACTCTTTTCGTGTCTACTATAAATTGGACAAGACATACTTAAATCCTTCATAGAGATAATATCTGAAAGAATAATACC TCAAGTGTTAATACTTGGCACATATGGATATATAATTGCCAAATTTTTTAGAATTTACACTTAAGTGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNCAACTCCGGTATCTTTGTCCNCAAAACGGTGATGGCACGAGGCGTGTTGCCCTCGACACCGGCAGCCCTAGTCGTTTCGATGCATCCTTCTTTGCAAACTTGAGGAGCGGAAGGGG AGTTTTGGAGTCTGATCAGAAGCTATGGACCGATGCCTCCACCAAAACCTTCGTGCAGGGCTTTCTAAGCGGNCANNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGTTTGCTAAATCGAT GGTGAAGATGAGTAACATTGGCGTGAAGACGGGGACCAATGGTGAAATTAGGAAAATATGCTCTGCCATTAATGCATGATTTAGATCATTAAAGATTATTGCATTTTGGTATTTCAGTGT TATCTGTTGGAGTCCGCGTAAGCTGATTCGTGGTGCATTCTAATGAAAGAAGGGAACGTGTAGTACTTTATAATTATATAAAATTGATGGCTATCGTCTCAAAAATGAAAATCTTGACCA TGAATTTCAAGATTTCTTATATTCTTGTTCTGGTGCCATTTGNTTTTTTATTCAAAACTAGATGTCGGTGGCTTATTTATTCTAGTAAATGTGTGACGATTGACATAATCTAAGGTTTTT AGTGGTTTTAAAAAATGCATTTTATGATAAAACGTAACAAATCTTTATAGAATATAGTAACATATAGAAAATTATATTTTTGAATGTTTTGTATTTGATCATATTTTAACATCATAAATT CGCAAGATTTGATATCTTTTCATTTACGTTCACAACTCTAAAAAGCGTCTTGCTAGGTGGTACAAAATCAATGACCTATCTTGTGCTCGACTTGGGTTCATTAATTTTTATTTTTATGAA ATTGATTTATATTATTATAATGCCTTCATATAGAAAATTAAAATAGAGTAAAGTAATTTGACACAATTACGATATAATTAATAAAAAAACATGTATACACTTCGGTTGTTGGAAAATAAT TCATTATATATAAGTTTTGATAACTTAATTTGTCTTTTTTTTTTCTCTTGTTATTCTGTACTTTATTTTGTTAGCCAACTATATATTTAATTATTAGGATCACCATTGTTATGTCAAGAA AATTTCCATTTAAAGCTCTGTCACGCTTGTGATAGTGATGTGCGACTCATTTGCGACTTCCATGCCACTCGCATGCTTGTTCTGTAGCAACGTCAAAGATGCGAGGAACCCAATAGTGGA AGGATCTACATCGATGCGGCAAACACTAGTGTCATTCACTTTTCTAGAAACGCCCTGGAAAAAATGCAGATTCAACTAGTGGCATTTGCACTTTAATCACTACTGATATGCACCATGCGG ACCGCTGTCATAGGACCGCCACCCACAGCTCACCGGCCATCGCCCCCTCTCGTGGCCAATGGGCTGTGGGCGGCAATCTTGTGTCTGCGGCGGCGACGATTGGCGATCGTGCGCCGGTCG TGCGGTGGTCGTGCGGCGTTCGTGCGACAATCGTGCGGCGGTCGTGCGGCGATCGTGCGATGGTCGTGCGGCAGTCGTGTGGTGACAGTCGGCGTAGATATAAATTTCTCATATGTCCAT GTGCATCAAAAGGGATACACTAAGTTTCTTGCTTTTGACCAATACTTGATACAGGAGGGCACACCATAGGAACTGGAGCTTNCCAATTCTTCANCTACAGACTCTACAACTTCACCAATA CTACGTCAAGTGGAGCGGACGCTTCCATTGATCCTTCCTTTGTTTCTCAACTCCAGTCTCTGTGTCCGCAAAACGGTGATGGCACAAGGCGTGTTGCCCTCAACACCGGCAGCCCTAGTC GTTTCGATGCATCCTTCTTCNCAAACTTGAGGAGCGGAAGGGGAGTTTTGGAGTCCGATCAGAAGCTNTGGACCGATGCCTCCACCAAAACCTTCGTGCAAGGCTTTCTAAGCGGCAGAG GCCNGACCCAGTTGGACTTCAACACGGAGTTTGCTAAATCGATGGTGAAGATGAGTAAGATTGGTGTGAAGACGGGCACCGATGGTGAAATTAGGAAAATATGCTCCGCCATTAATGNA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GTGCAAGGACGAGGTACGAGAGTAGAGTCCTACTCAGGTTCGTGTCCGCNTGCCGAGGCCATTATTAGGTCAACGATTCAAGCCCATTTCCNGTCCGATCCCACTGTGGCTCCTGGGCTG TTTTTTTTTTTTTTTAACCCCTCACCTCCCCCTATGCACTTTCATGATCGCTTCATCCAGGGATGTGACGGTTCGGTTCTCATCAATGGGCCCAANGCTGAGAAAACGGCGCCTCCGAAC CATTTGCTGAGAGGATATGAATTGATCAATGACGCGAAGACCCAGCTCGAAGCTGCGTGTCCTAGTGTCGTTTCATGTGCTGATATTCTTGCTCTTCCAGCCTGTAATTCCGTTGCTCTG GACGCTTCCATTGATCCTTCCTTTGTTTCTCAACTCCAGTCTCTGTGTCCGCAAAACGGTGATGGCACAAGGCGTGTTGCCCTCAACACCGGCAGCCCTAGTCGTTTCGATGCATCCTTC TTCNCAAACTTGAGGAGCGGAAGGGGAGTTTTGGAGTCCGATCAGAAGCTNTGGACCGATGCCTCCACCAAAACCTTCGTGCAAGGCTTTCTAAGCGGCAGAGGCCNGACCCAGTTGGAC TTCAACACGGAGTTTGCTAAATCGATGGTGAAGATGAGTAAGATTGGTGTGAAGACGGGCACCGATGGTGAAATTAGGAAAATATGCTCCGCCATTAATGNA |
Retrieve as FASTA
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