Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
311 (294) |
PWM (Da): |
32380.95 (30531.9) |
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PI (pH): |
8.15 (8.21) |
Peptide Signal: |
cut: 18 range:18-311 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
RSAFLLLLCFLLETASAQLSSTFYSTSCPSALSTIKSGVSSAVKSEARMGASLLRLHFHDCFVNGCDASVLLDDTANFTGEKNAGPNANSLRGFNVIDTIKSQLESACPGIVSCADLLTV AARDSVVAVSGPSWTVPLGRRDSTTASQSAANSNIPAFTLSLSGLITAFSNKGFTAKEMVALSGSHTIGQARCTTFRTRLYNENNINxTFATSLKANCPSSGGDNNLSPLDTTSPTSFDN AYFKNLQIQKGLLHSDQQLFSGGSTDAQVNAYSSNSATFMTDFANAMVKMGNLSPLTGSSGQIRKSCGKVN |
Retrieve as FASTA
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Remarks |
Partial sequence from genomic (3 introns). Short 5' end is missing. No EST. Scaffold_1_736 (4153..6893). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
AGATCCGCCTTCTTATTGTTGCTGTGTTTTCTTCTGGAAACAGCCTCAGCTCAGCTGTCCAGTACTTTCTACTCCACCTCCTGTCCCAGCGCCCTCTCCACCATTAAATCCGGCGTGAGC TCTGCGGTCAAAAGTGAGGCCCGCATGGGCGCATCGCTGCTCCGCCTTCACTTCCACGATTGCTTCGTTAATATGCAAGTCCCTCTGCCCGGAGTCTCTCCTCTCTTTCCGATTGATTGC TACCTTTGTTTCTCTTCTGTCATTCAAGCTGCATGCAAGCGTGCATGCATGATGCATCTTTGTGCTTTTGTGCATGTGAAACGTTCCAACCGACCTCATAGTNAAAAAGAATGATTAGAT TTCGCTTCTACGCAAGTTACTCTCTTTTTCACTAACCAAACAATAGGTAGGAAGTACACATATTGAATTAATCGAGTCTGACCGACCCTTTTTGTGCCATGCATTTTTGTGAGTTTNTTA TTATNATNATAATAATAGGCTGTGTTTATTGAAGTCGTTTTAAAATTAGAGNTATGTTTTCATTCAAACAGCAATAAAAAGCACGGCCCTTAGAATAAAAGCACTTCTTTTTGGTGATTC AAAGAAAAAAAAATTTCATGAGTAATTCTAGTATACACCGCTAGTGTAAAATTCTCATTCCGTAAGTGGTCTTATCTACTAGATATTTTGGTGGTTGGGGAGAGATTTGGTAATTAGAAT CCTCGAATCAAGATGGACAAGAATATTGTTGTGCGTGCTCTAATTTTTTTTTTTTTCATTTATTATATCGACAATGTAAGCCATGCAGGCGAGCGTATTTTATGCCGAGTATGTTGTGGA TAAGACGTGTTTGTGTATGATTAGCTACATGATTTTAAATTCGATNAATTAGATCACGCAAAAGTCCTAAACGTTGGAGATGGCAAAAAGAGAGAGCGACAGCCATGCTTTTATGACGGT GGTTGACTTTACGCGTTTNTCANGTTTGGCAAATCAATNAGTTGTTTTCAATAGGTTTTGGTCATATTTTGATCACTGTCACTTTGGTTGCCATACTTTCCTACATTGAAAATGATATTT TGCTATAAATATCTTTTTTTAATGAAATTTGTTAATCCAATGGAGTTCTAAAAATTGTGTTAGATCTTTTGAACAATTTGAAGAACCTTCATTGTTATCCACTTCGTGTTCTTTGTGCAT AATTCAAGAGTTGTCCATATCCTAATGGGCCTTTCTCCATCAAACATGCCGTCTCTATTTCAAACTTGATATTTAAGCCTGATCCATTTTTCTCGATTAGATGCTTTTCTCTTTTCCTGT ATGGGTTGGAAATTGTCTAGATCTTCAAGGTCATTCGAGAAGACAAAATTCAGGCTAATTCTAGTAAATCAAAAAGTCGGTGACTCCCCTCTGTTAAATATTAAAGGACACGCCATGTTG CTAACCAAAAGCCTTGATTTAGAAAAACATCATAGCACAATCATTTTGTTTCTAGTCCGACAATTATTGGATGCATTATTTCTAGAGAGACGACACAAATTANAGTCAAAAGGCACGAGA AAGANTGTCATTCCCGTCCAAACTGGTGTCTGCAGGCGTTCATAATGGGGGACAAAAGGGGGAAAATGATAAGGGAAATTAATCAGTGTTCATACTTTATGTTCAGGAAAAGTTATAGCA CTCGTTCTNTTTATATTTTGACCGTTGAATCTAATGAATTCAATAGGATCGATTTGACTAATTAACGATGTGTGGCACAAAATATANAATAGGGATGCGACGCATCTGTTCTATTGGACG ACACTGCAAACTTCACTGGGGAGAAGAATGCTGGCCCAAATGCCAATTCCTTACGGGGATTCAACGTGATTGACACAATCAAATCCCAATTGGAGAGTGCATGCCCCGGCATCGTGTCCT GCGCTGATCTCTTGACCGTGGCTGCGCGAGATTCCGTCGTCGCTGTAAAAGTGCACACTTTTTTCTTAATTCTAGTGATCAATNGTGATGAGAAAAAATCACTCNTTATGATCTCGATGC CGCANCAATACTAACACGTGTGGATTTNTTTAACTATTAAATTCTTAGTTAGGTGGCCCAAGTTGGACAGTCCCGCTAGGAAGAAGAGACTCAACCACTGCAAGCCAAAGTGCTGCTAAT AGCAACATCCCTGCCTTTACTTTGAGCCTTAGCGGCCTCATCACTGCCTTCTCTAACAAAGGTTTCACCGCCAAAGAAATGGTGGCACTCTCAGAGGTCATTATTTTTCTTTTTTTTGTG GCACCTTTTAATAACGAATTTACAATTATGCTNNATCGATATACTAAGATTAATATTAAAAAGTTGTTCGATTGTTGNTAACAGGGTCGCACACGATAGGTCAAGCCCGATGCACAACTT TCCGGACCCGTCTTTACAACGAGAACAACATCAACNCCACGTTCGCAACCTCGCTCAAGGCGAACTGCCCAAGCTCCGGAGGCGACAACAATCTCTCTCCTCTAGACACCACGAGCCCGA CGTCCTTCGACAATGCCTACTTTAAGAACTTGCAAATCCAAAAAGGTCTTCTTCACTCGGACCAGCAATTGTTTAGTGGTGGTTCCACGGACGCTCAAGTGAACGCTTATAGCAGCAATT CAGCTACTTTCATGACAGATTTTGCTAACGCCATGGTGAAGATGGGTAACCTCAGCCCGCTCACCGGCTCAAGCGGTCAGATTAGGAAGAGTTGCGGGAAAGTCAAC |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
AGATCCGCCTTCTTATTGTTGCTGTGTTTTCTTCTGGAAACAGCCTCAGCTCAGCTGTCCAGTACTTTCTACTCCACCTCCTGTCCCAGCGCCCTCTCCACCATTAAATCCGGCGTGAGC TCTGCGGTCAAAAGTGAGGCCCGCATGGGCGCATCGCTGCTCCGCCTTCACTTCCACGATTGCTTCGTTAATGGATGCGACGCATCTGTTCTATTGGACGACACTGCAAACTTCACTGGG GAGAAGAATGCTGGCCCAAATGCCAATTCCTTACGGGGATTCAACGTGATTGACACAATCAAATCCCAATTGGAGAGTGCATGCCCCGGCATCGTGTCCTGCGCTGATCTCTTGACCGTG GCTGCGCGAGATTCCGTCGTCGCTGTAAGTGGCCCAAGTTGGACAGTCCCGCTAGGAAGAAGAGACTCAACCACTGCAAGCCAAAGTGCTGCTAATAGCAACATCCCTGCCTTTACTTTG AGCCTTAGCGGCCTCATCACTGCCTTCTCTAACAAAGGTTTCACCGCCAAAGAAATGGTGGCACTCTCAGGGTCGCACACGATAGGTCAAGCCCGATGCACAACTTTCCGGACCCGTCTT TACAACGAGAACAACATCAACNCCACGTTCGCAACCTCGCTCAAGGCGAACTGCCCAAGCTCCGGAGGCGACAACAATCTCTCTCCTCTAGACACCACGAGCCCGACGTCCTTCGACAAT GCCTACTTTAAGAACTTGCAAATCCAAAAAGGTCTTCTTCACTCGGACCAGCAATTGTTTAGTGGTGGTTCCACGGACGCTCAAGTGAACGCTTATAGCAGCAATTCAGCTACTTTCATG ACAGATTTTGCTAACGCCATGGTGAAGATGGGTAACCTCAGCCCGCTCACCGGCTCAAGCGGTCAGATTAGGAAGAGTTGCGGGAAAGTCAAC |
Retrieve as FASTA
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