Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
185 |
PWM (Da): |
20240.21 |
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PI (pH):
| 6.98 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MSSCSVWHNI EAAATIKPP* KLQWLYYQNL CPDAKKYMxD HVEFYWKEDR TLAPNLI*LF YFDCFVGCDA LILFNGPDSK KTASQNAPLL GLPMETIDKA KEVLEHHCPG VVSCADIINL
AARDAVVLVC NMVCRMSHPF STGRRDENSS SAKSVDLPLQ AVLGKAVLAY FKSxRGLNVL DLTTLLG
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Retrieve as FASTA
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Remarks |
Pseudogene from genomic (stop codon in frame, last exon is missing). Scaffold_1_269 (3038..3913) |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGCTCAT GCTCAGTGTG GCACAACATC GAGGCAGCAG CAACAATCAA ACCGCCGTAG AAGTTGCAGT GGCTTTACTA CCAAAATTTG TGCCCTGACG CCAAGAAGTA CATGTGnGAC
CATGTTGAGT TTTATTGGAA GGAAGACAGG ACnCTCGCTC CCAATCTCAT CTAACTATTT TACTTCGATT GCTTCGTCAC CGTACGTGTC ATATGTTTTT TTTCCCTTTC CCAGACGATC
TTGAACTCCn CATCGCTnnn ATCGCTTCAA TATCAGGTTT CCATCGCCTT TCTAAGCACA TGATACCCTT TCACCTAACG GTTTGAACCT CTCAAACCGG GCTTTCTAAT GTACCAGCTT
TTGTAAAACA AGGGTGTGAT GCGTTGATTC TATTCAATGG GCCAGATTCA AAGAAAACAG CATCGCAAAA TGCACCGCTT CTAGGGCTTC CTATGGAGAC GATTGACAAG GCCAAGGAAG
TCCTGGAACA CCATTGTCCC GGGGTAGTAT CTTGCGCCGA CATAATCAAC CTTGCTGCTA GAGATGCTGT TGTCTTGGTA TGCAACATGG TTTGCAGnTT TTTTACTTTT TGAGCTTGAA
AAGAGATCGT TTAGGCTGCT GCACTGATGA TTGACATGCT GTTAGCTTGA GTTTTGGAGC GTTCGATATG GAAAAAAATT AGAATTATTG ATGCAATAAT GATGCTGCGA CATGCGGGAG
GGATGTCGCA CCCCTTTTCG ACGGGGAGAA GGGACGAGAA TTCATCCTCC GCAAAGTCAG TGGACCTCCC GTTGCAGGCT GTCCTGGGGA AAGCGGTGCT CGCTTACTTC AAATCAAnnA
GGGGTTTGAA TGTGCTAGAC CTCACTACTC TACTTGGC
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGCTCAT GCTCAGTGTG GCACAACATC GAGGCAGCAG CAACAATCAA ACCGCCGTAG AAGTTGCAGT GGCTTTACTA CCAAAATTTG TGCCCTGACG CCAAGAAGTA CATGTGnGAC
CATGTTGAGT TTTATTGGAA GGAAGACAGG ACnCTCGCTC CCAATCTCAT CTAACTATTT TACTTCGATT GCTTCGTCGG GTGTGATGCG TTGATTCTAT TCAATGGGCC AGATTCAAAG
AAAACAGCAT CGCAAAATGC ACCGCTTCTA GGGCTTCCTA TGGAGACGAT TGACAAGGCC AAGGAAGTCC TGGAACACCA TTGTCCCGGG GTAGTATCTT GCGCCGACAT AATCAACCTT
GCTGCTAGAG ATGCTGTTGT CTTGGTATGC AACATGGTTT GCAGGATGTC GCACCCCTTT TCGACGGGGA GAAGGGACGA GAATTCATCC TCCGCAAAGT CAGTGGACCT CCCGTTGCAG
GCTGTCCTGG GGAAAGCGGT GCTCGCTTAC TTCAAATCAA nnAGGGGTTT GAATGTGCTA GACCTCACTA CTCTACTTGG C
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Retrieve as FASTA
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