Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
149 |
PWM (Da): |
16067.89 |
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PI (pH):
| 5.66 |
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Sequence 192
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MSCHAQLSFMFxDESCPNALTAIRTSIRIAVSRKRQMAASLIQLHFHNCFI*GCDESILLDNSTTNSSERDAP*NRGSVRSYEVIDYEKSESVSCADIVAVATRDASVAVGDPSWMVKLGRRDSTTVSPSLASSDLPSFQEGLEKLVPKFA |
Retrieve as FASTA
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Remarks |
Pseudogene from genomic (5' and 3' ends are missing; Stops in frame). Scaffold_9_33200 (42296..41698) |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTCCTGCCATGCACAGCTTTCCTTCATGTTTTNTGACGAGTCATGCCCGAATGCGCTCACCGCAATAAGGACTTCCATCAGAATCGCGGTCTCGAGGAAGCGCCAGATGGCTGCTTCT CTCATCCAACTCCATTTCCACAACTGCTTCATCTAGGGTTGCGACGAGTCAATACTATTGGACAATAGCACCACCAACTCTAGCGAGAGAGACGCCCCATAGAATAGAGGCTCTGTGAGA AGTTACGAGGTGATAGACTACGAAAAGTCAGAAGTAGAGAAGATCTGTCCAGGAGTCGGTGTCTTGTGCGGATATTGTTGCCGTTGCAACTCGAGATGCTTCTGTTGCCGTAAGTCTTCC CATAATTCTGAAGATATGCATCTTATGACCACTTCATTACTTTCAAATATCGACTACAAGTTTAAATCGTTTTCCTTACCAATATAACTGATGCTGTTTTGACGAGAATGTAGGTTGGCG ATCCTTCTTGGATGGTGAAGCTCGGAAGAAGAGACTCGACCACCGTAAGCCCATCACTCGCATCAAGCGATCTTCCATCGTTTCAAGAAGGCCTCGAGAAACTCGTGCCTAAATTTGCA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTCCTGCCATGCACAGCTTTCCTTCATGTTTTNTGACGAGTCATGCCCGAATGCGCTCACCGCAATAAGGACTTCCATCAGAATCGCGGTCTCGAGGAAGCGCCAGATGGCTGCTTCT CTCATCCAACTCCATTTCCACAACTGCTTCATCTAGGGTTGCGACGAGTCAATACTATTGGACAATAGCACCACCAACTCTAGCGAGAGAGACGCCCCATAGAATAGAGGCTCTGTGAGA AGTTACGAGGTGATAGACTACGAAAAGTCAGAATCGGTGTCTTGTGCGGATATTGTTGCCGTTGCAACTCGAGATGCTTCTGTTGCCGTTGGCGATCCTTCTTGGATGGTGAAGCTCGGA AGAAGAGACTCGACCACCGTAAGCCCATCACTCGCATCAAGCGATCTTCCATCGTTTCAAGAAGGCCTCGAGAAACTCGTGCCTAAATTTGCA |
Retrieve as FASTA
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