Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
289 |
PWM (Da): |
29241.84 |
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PI (pH):
| 8.38 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MGIVLGFLGN AAVSTQAQLE MxYYSKSCPE AEKIVRELSK xHIRNAHSLA AALLRxHxHD xxVGCDASVL FNSS*SNPAE RDSPxNFTxR GFDFIDRVKS LVxxExPGIV SCADIIALAA
RDAIVAxGGP FWRVPTVRRD GVISRASEAL SNIPSPSSKL NAPQxFFANK GLDLKDLVLS SGAHTIGASH CSSFRNHLYN FTGGEDQDPS LESGYAANLK AKKCRSLSND TIFRSDSAIT
TSPATKLFIx QVLQGSLDNx YAQFALAMEK MGRxDVKTGL AGEIRKHCAL
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Retrieve as FASTA
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Remarks |
Pseudogene from genomic. (5' end is missing; stops in frame; PS is missing). Scaffold_11_36238 (20075..21463) |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGGCATTG TTTTGGGTTT TCTAGGGAAT GCnGCTGTCT CAACTCAAGC TCAACTTGAG ATGnnTTATT ATTCTAAGAG CTGCCCAGAA GCTGAAAAAA TTGTGAGAGA GTTGTCGAAG
ATnCACATCC GCAATGCTCA TTCTTTAGCA GCCGCTCTGC TGAGGAnGCA CnTTCATGAT TnCTTnGTnn GGGTTTTTAC TTTCTCTCCC ATGTAGCTTG CATCAGnGCA CGTTAATATC
TTACAGTAAA CTTGAGAAAT TTGGAGGAAT CATTACTGCA TATCTCCATT TCAAGAGTAC TnGTATTTTC TTAATCTCAT GCTAGCTTTG AGAAATTTGA GCTCGTnGTT TGTTGATCAC
CGTCAGGGTT GTGATGCTTC TGTGCTCTTC AACTCTAGTT GAAGCAACCC AGCAGAGAGA GATTCTCCTC nAAACTTCAC TnTGAGAGGC TTTGACTTCA TCGATCGAGT GAAGAGCCTT
GTCnAAGnTG AATnCCCCGG GATTGTCTCT TGCGCAGACA TCATAGCTTT GGCCGCAAGA GATGCAATAG TGGCCnCTAT nAGGACAACA GCACAAAGAT TATTTCCACG AAAGCAGATA
TCCATTGTnC AAGTGCGTCT AGATCTTAAC ACTATGTGAA AACTGTTTTC TCCACTGATG ATGnAATGAG nATAGATTTG CAAGCGAAAA AAnCATTGAG ATTGAGTGGG GAATTAAAAC
TGTATCTGAT nTGCATGAAA CTATAGGGAG GTCCATTTTG GAGAGTTCCT ACAGTAAGAA GAGATGGAGT GATTTCAAGG GCATCGGAAG CATTGAGCAA CATCCCTTCT CCATCCAGCA
AACTCAACGC TCCCCAAAnA TTTTTCGCCA ATAAAGGACT CGATCTTAAA GACTTAGTTT TATCGTCCGG TGAGGCCATA TGTCACCCAC CTATAAAAAT GAGAGGATAT CAGTTGATGA
GTTAAACCAT TAGTATCGAG AGAnATCGAA nTGTATATTC AGTACGnGAC TAAGCTGGTC ATGTGCTAAA TTAGTAGTGG CTGATGTGAC TTGTTCTGAn ATAGGAGCTC ACACGATTGG
TGCATCTCAC TGCTCGTCTT TCCGGAACCA CCTATACAAC TTCACTGGCG GTGAGGATCA AGACCCnTCC TTGGAAAGCG GGTACGCGGC GAATCTCAAG GCCAAGAAGT GCAGGAGCCT
GAGTAACGAT ACCATCTTTC GATCGGATTC TGCTATCACT ACCAGTCCTG CTACCAAGCT CTTCATCAnA CAAGTCCTTC AAGGGTCACT TGACAACTTn TACGCTCAAT TTGCCTTGGC
AATGGAGAAG ATGGGCCGGA TnGACGTGAA GACTGGGCTG GCGGGCGAGA TAAGGAAGCA TTGTGCGCTG
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGGCATTG TTTTGGGTTT TCTAGGGAAT GCnGCTGTCT CAACTCAAGC TCAACTTGAG ATGnnTTATT ATTCTAAGAG CTGCCCAGAA GCTGAAAAAA TTGTGAGAGA GTTGTCGAAG
ATnCACATCC GCAATGCTCA TTCTTTAGCA GCCGCTCTGC TGAGGAnGCA CnTTCATGAT TnCTTnGTnG GTTGTGATGC TTCTGTGCTC TTCAACTCTA GTTGAAGCAA CCCAGCAGAG
AGAGATTCTC CTCnAAACTT CACTnTGAGA GGCTTTGACT TCATCGATCG AGTGAAGAGC CTTGTCnAAG nTGAATnCCC CGGGATTGTC TCTTGCGCAG ACATCATAGC TTTGGCCGCA
AGAGATGCAA TAGTGGCCnC TGGAGGTCCA TTTTGGAGAG TTCCTACAGT AAGAAGAGAT GGAGTGATTT CAAGGGCATC GGAAGCATTG AGCAACATCC CTTCTCCATC CAGCAAACTC
AACGCTCCCC AAAnATTTTT CGCCAATAAA GGACTCGATC TTAAAGACTT AGTTTTATCG TCCGGAGCTC ACACGATTGG TGCATCTCAC TGCTCGTCTT TCCGGAACCA CCTATACAAC
TTCACTGGCG GTGAGGATCA AGACCCnTCC TTGGAAAGCG GGTACGCGGC GAATCTCAAG GCCAAGAAGT GCAGGAGCCT GAGTAACGAT ACCATCTTTC GATCGGATTC TGCTATCACT
ACCAGTCCTG CTACCAAGCT CTTCATCAnA CAAGTCCTTC AAGGGTCACT TGACAACTTn TACGCTCAAT TTGCCTTGGC AATGGAGAAG ATGGGCCGGA TnGACGTGAA GACTGGGCTG
GCGGGCGAGA TAAGGAAGCA TTGTGCGCTG
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Retrieve as FASTA
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