Sequence Properties
first value : protein second value (mature protein)
|
Length (aa): |
291 |
PWM (Da): |
30147.04 |
|
PI (pH):
| 8.12 |
|
Sequence 0
Send to BLAST
Send to Peroxiscan
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
IxSTSTSTQL SEENYYAAKC PKALETVRSN VKAAVAKEAH MGASLLRLHF HNYFVNGCDA SILLDDTTNF IGEKTALPNA NSVRRFxLID TIKLEVEKLC PGVVLCADIL AIAARDSVVA
LGGPS*QV*L GRRVxTMANx SAANTNLPSP KLNLSDLIxA FTNKGFTAQE MVALSGSHTI GxARCTTFRD QLYNESNMNx SFAAPSKANC PNSGGDNNLS PPMSFDNGYF RNLVSQKGLL
HSDQQLFSxG STNAQMTAYN KNFGSFQKDF AKAVVxMGSL SPLTDYPSLI FGN
|
Retrieve as FASTA
|
|
Remarks |
Pseudogene from genomic (Both 5' end and 3' end are missing, stops in frame). Scaffold_11_36687 (7565..8619) |
DNA ►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATCnnATCGA CCTCTACCTC GACACAATTG TCCGAGGAGA ACTACTACGC AGCAAAGTGC CCGAAGGCAC TTGAGACCGT GAGATCCAAC GTGAAGGCGG CGGTGGCCAA GGAGGCTCAC
ATGGGAGCAT CCTTGCTCCG ACTTCACTTT CACAACTACT TCGTCAATGT AAGTGTCTTC CGCTTTCTAG CTCTATTCAA ACCGTCTTCT TTTTTTCATC TAATATTAAC GAAAGTTATT
TTTAATTTGT TTTATAGGGA TGTGATGCAT CCATTCTACT AGACGATACA ACGAACTTCA TCGGnGAGAA GACAGCCCTT CCCAATGCAA ACTCTGTGAG AAGATTCnAC TTGATCGACA
CCATCAAGTT GGAAGTAGAG AAGTTATGCC CCGGTGTTGT CTTGTGCGCT GACATCTTAG CCATTGCTGC TAGGGACTCC GTTGTCGCAG TAAGTGCCAA CCCTTGAAAT TTCTTGAAAC
ATCCACAGAG GCTATTATTT TTCCTGAACT TATTAGGATT CAATTTTTGA TGTGTAGTTG GGTGGACCGA GTTGACAAGT TTAGCTCGGA AGAAGGGTTT nGACCATGGC GAACGnAAGT
GCTGCTAATA CCAACCTTCC ATCTCCAAAG CTAAATCTCA GCGACCTCAT CAnCGCTTTC ACCAACAAAG GGTTCACTGC CCAAGAAATG GTGGCACTCT CAGGATCTCA CACCATAGGC
nAGGCTAGGT GCACnACATT CCGGGACCAG CTCTACAACG AGAGTAACAT GAACTnGTCA TTTGCCGCTC CTTCGAAAGC CAATTGCCCC AACTCGGGAG GCGACAACAA CCTTTCCCCT
CCCATGTCCT TTGACAATGG CTACTTCCGA AACTTGGTGA GCCAAAAGGG CTTACTCCAC TCGGACCAGC AATTGTTCAG TGnAGGTTCn ACGAATGCTC AAATGACTGC CTACAACAAG
AACTTTGGCT CATTTCAGAA AGATTTTGCC AAGGCTGTGG TCAAnATGGG TAGCCTTAGC CCTCTCACCG ACTATCCCAG CTTAATTTTC GGAAAT
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATCnnATCGA CCTCTACCTC GACACAATTG TCCGAGGAGA ACTACTACGC AGCAAAGTGC CCGAAGGCAC TTGAGACCGT GAGATCCAAC GTGAAGGCGG CGGTGGCCAA GGAGGCTCAC
ATGGGAGCAT CCTTGCTCCG ACTTCACTTT CACAACTACT TCGTCAATGG ATGTGATGCA TCCATTCTAC TAGACGATAC AACGAACTTC ATCGGnGAGA AGACAGCCCT TCCCAATGCA
AACTCTGTGA GAAGATTCnA CTTGATCGAC ACCATCAAGT TGGAAGTAGA GAAGTTATGC CCCGGTGTTG TCTTGTGCGC TGACATCTTA GCCATTGCTG CTAGGGACTC CGTTGTCGCA
TTGGGTGGAC CGAGTTGACA AGTTTAGCTC GGAAGAAGGG TTTnGACCAT GGCGAACGnA AGTGCTGCTA ATACCAACCT TCCATCTCCA AAGCTAAATC TCAGCGACCT CATCAnCGCT
TTCACCAACA AAGGGTTCAC TGCCCAAGAA ATGGTGGCAC TCTCAGGATC TCACACCATA GGCnAGGCTA GGTGCACnAC ATTCCGGGAC CAGCTCTACA ACGAGAGTAA CATGAACTnG
TCATTTGCCG CTCCTTCGAA AGCCAATTGC CCCAACTCGG GAGGCGACAA CAACCTTTCC CCTCCCATGT CCTTTGACAA TGGCTACTTC CGAAACTTGG TGAGCCAAAA GGGCTTACTC
CACTCGGACC AGCAATTGTT CAGTGnAGGT TCnACGAATG CTCAAATGAC TGCCTACAAC AAGAACTTTG GCTCATTTCA GAAAGATTTT GCCAAGGCTG TGGTCAAnAT GGGTAGCCTT
AGCCCTCTCA CCGACTATCC CAGCTTAATT TTCGGAAAT
|
Retrieve as FASTA
|
|