Sequence Properties
first value : protein second value (mature protein)
|
Length (aa): |
124 (270) |
PWM (Da): |
12160.88 (27762.8) |
|
PI (pH):
| 9.35 (8.10) |
Peptide Signal:
| cut: 26 range:26-295 |
|
Sequence 0
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GGGTFFTNRL YNFTGKxNTx PxLNSTYATY LKGKCSTSDT TTTxAVDPGS SRSFDKAxxP HST*KHGPLP IRCCSx*PTS EPPHSRPSCS DFN*FFTExA QSMxRMGAVG VLGGGVGELR
IDRSKIN
|
Retrieve as FASTA
|
|
Remarks |
Pseudogene from genomic (large 5' end is missing, stops in frame). scaffold_11_38344 (21408..21028) |
DNA ►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GGTGGTGGCA CTTTTTTCAC CAATAGGCTC TACAACTTCA CCGGAAAGGn CAACACCnAC CCnnCCCTCA ACTCCACCTA TGCCACCTAC TTAAAGGGCA AGTGCAGCAC TTCCGACACG
ACCACCACCn TGGCCGTCGA CCCCGGTAGC TCCCGGAGCT TCGATAAGGC AnTAnTGCCC CATTCTACTT AAAAGCATGG GCCTCTTCCA ATTCGATGCT GCTCTnTTTG ACCAACAAGC
GAGCCACCAC ATTCGCGTCC CAGTTGCTCG GACTTCAACT AGTTCTTCAC CGAATTnGCA CAGTCGATGT nGAGGATGGG CGCCGTCGGA GTGCTCGGGG GCGGTGTTGG AGAACTTAGA
ATAGATCGTA GCAAGATCAA C
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GGTGGTGGCA CTTTTTTCAC CAATAGGCTC TACAACTTCA CCGGAAAGGn CAACACCnAC CCnnCCCTCA ACTCCACCTA TGCCACCTAC TTAAAGGGCA AGTGCAGCAC TTCCGACACG
ACCACCACCn TGGCCGTCGA CCCCGGTAGC TCCCGGAGCT TCGATAAGGC AnTAnTGCCC CATTCTACTT AAAAGCATGG GCCTCTTCCA ATTCGATGCT GCTCTnTTTG ACCAACAAGC
GAGCCACCAC ATTCGCGTCC CAGTTGCTCG GACTTCAACT AGTTCTTCAC CGAATTnGCA CAGTCGATGT nGAGGATGGG CGCCGTCGGA GTGCTCGGGG GCGGTGTTGG AGAACTTAGA
ATAGATCGTA GCAAGATCAA C
|
Retrieve as FASTA
|
|