Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
319 (296) |
PWM (Da): |
33630.28 (31359.0) |
Transmb domain: |
i7-26o |
PI (pH):
| 8.48 (8.48) |
Peptide Signal:
| cut: 24 range:24-319 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAPVxFNLVH AFILLTLxTT AFAIxxRAEL TPAFYxSLCP QMxVVEAAVQ EEPRMGASxL RLHFHECFVN GxDASILLDS MPSFASEKFA IPNNNSVRGF EVINWIKATV NEARGGPVVS
CADILAIAA* DSVIALGGLW WKVRLRRRDS TVASKDEAQA SLPSPFSNIS NITKSFINQS LDINDxVVLS GAHTLGYARC TIFRGRIYSD TNIDRPxAHS LQxFCPPFPI NESDPRLAAL
DQTPAVFDTL YYKNLLQQKG LLHSDQALLN NRLAAKLVKS YxEEGERFQR xFTKSMVKMx NIKPLTGERG QxRCDCRRAN
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Retrieve as FASTA
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Remarks |
Pseudogene from genomic (Stop codons in frame). Scaffold_1_745 (33961..35122) |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTCCAG TTnGATTCAA TCTTGTCCAT GCATTTATCT TGTTAACTCT CGnGACCACA GCTTTCGCCA TTAnGCnnCG TGCCGAGCTC ACACCTGCTT TCTACnATTC ACTTTGTCCT
CAAATGGnnG TGGTCGAGGC CGCTGTCCAG GAAGAGCCAC GCATGGGCGC TTCTTnACTC CGTCTGCACT TCCACGAGTG CTTTGTCAAT GTACTAAGAT GTCTATGCnT ACTTTTnGCA
CACCTTTTTA TTTGnTCTTA TTATGTGCAT GCTTAATGAG TTCnGGGATA ATnGATAATG CAGGGATnCG ACGCTTCAAT TCTTTTGGAC TCTATGCCTT CCTTTGCTAG CGAAAAGTTT
GCCATTCCTA ATAACAATTC AGTnAGAGGA TTCGAAGTAA TCAACTGGAT CAAGGCAACA GTTAATGAAG CTCGTGGAGG CCCTGTGGTC TCTTGTGCAG ACATCTTGGC CATCGCTGCC
TGAGACTCTG TCATAGCGGT ACGTATTAAT TACTCGCATT ATCnTCCAAT TTCTAAAGGA TGGCCTAAAT ACTACAGATG AACAAGAGAC AACAAATATG TGGGAATAAT TTGTTATTAT
TCCAATGCAG CTAGGAGGAC TATGGTGGAA GGTTCGGCTC AGAAGAAGAG ACTCAACCGT GGCAAGCAAG GACGAGGCTC AAGCATCTCT TCCTTCGCCT TTTAGCAATA TCTCTAACAT
AACCAAGTCC TTCATAAATC AAAGCCTCGA CATTAATGAC TnGGTCGTCC TGTCCGGTGC ACACACACTA GGATATGCnC GGTGCACAAT ATTCAGAGGA CGGATCTACA GTGACACAAA
CATTGACCGA CCTTnnGCAC ACAGCCTTCA GTnGTTTTGC CCnCCCTTTC CAATCAACGA ATCCGACCCT AGGCTCGCTG CTTTGGATCA AACTCCTGCT GTCTTTGATA CTTTGTACTA
TAAAAACTTG TTACAGCAAA AAGGGCTTCT CCATTCCGAT CAGGCGCTTC TCAACAATCG CCTAGCTGCC AAGCTGGTCA AGTCTTACAG nGAAGAAGGC GAGAGGTTTC AGAGAGAnTT
CACnAAATCC ATGGTTAAGA TGnGAAACAT AAAGCCTTTG ACTGGTGAAC GTGGCCAAGn TCGATGCGAC TGTAGACGAG CGAAC
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTCCAG TTnGATTCAA TCTTGTCCAT GCATTTATCT TGTTAACTCT CGnGACCACA GCTTTCGCCA TTAnGCnnCG TGCCGAGCTC ACACCTGCTT TCTACnATTC ACTTTGTCCT
CAAATGGnnG TGGTCGAGGC CGCTGTCCAG GAAGAGCCAC GCATGGGCGC TTCTTnACTC CGTCTGCACT TCCACGAGTG CTTTGTCAAT GGATnCGACG CTTCAATTCT TTTGGACTCT
ATGCCTTCCT TTGCTAGCGA AAAGTTTGCC ATTCCTAATA ACAATTCAGT nAGAGGATTC GAAGTAATCA ACTGGATCAA GGCAACAGTT AATGAAGCTC GTGGAGGCCC TGTGGTCTCT
TGTGCAGACA TCTTGGCCAT CGCTGCCTGA GACTCTGTCA TAGCGCTAGG AGGACTATGG TGGAAGGTTC GGCTCAGAAG AAGAGACTCA ACCGTGGCAA GCAAGGACGA GGCTCAAGCA
TCTCTTCCTT CGCCTTTTAG CAATATCTCT AACATAACCA AGTCCTTCAT AAATCAAAGC CTCGACATTA ATGACTnGGT CGTCCTGTCC GGTGCACACA CACTAGGATA TGCnCGGTGC
ACAATATTCA GAGGACGGAT CTACAGTGAC ACAAACATTG ACCGACCTTn nGCACACAGC CTTCAGTnGT TTTGCCCnCC CTTTCCAATC AACGAATCCG ACCCTAGGCT CGCTGCTTTG
GATCAAACTC CTGCTGTCTT TGATACTTTG TACTATAAAA ACTTGTTACA GCAAAAAGGG CTTCTCCATT CCGATCAGGC GCTTCTCAAC AATCGCCTAG CTGCCAAGCT GGTCAAGTCT
TACAGnGAAG AAGGCGAGAG GTTTCAGAGA GAnTTCACnA AATCCATGGT TAAGATGnGA AACATAAAGC CTTTGACTGG TGAACGTGGC CAAGnTCGAT GCGACTGTAG ACGAGCGAAC
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Retrieve as FASTA
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