View Redoxidase 116

Entry information : AtPrx23 (At2g38390 / PER23 / AtperoxP23 / ATP34)

Entry ID	116
Creation	2006-02-02 (Filippo Passardi)
Last sequence changes	2015-06-02 (Christophe Dunand)
Sequence status	complete
Reviewer	Achraf Jemmat
Last annotation changes	2015-11-04 (Achraf Jemmat)

Peroxidase information: AtPrx23 (At2g38390 / PER23 / AtperoxP23 / ATP34)

Name (synonym)

AtPrx23 (At2g38390 / PER23 / AtperoxP23 / ATP34)

Class

Class III peroxidase [Orthogroup: Prx047]

Taxonomy

Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis

Organism

Arabidopsis thaliana [TaxId: 3702 ]

Cellular localisation

N/D

Tissue types

Mixed tissues
Roots

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	AtPrx23 start..stop	S start..stop
AlyPrx23	662	0	1..349	1..349
AruPrx23	644	0	1..349	1..349
AhalPrx38	642	0	1..349	1..349
CrubPrx39	637	0	1..349	1..350

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '116' 'join(16079726..16079953,16080097..16080288,16080387..16080555,16080921..16081381)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	16079726..16079953	226	N° 2	16080097..16080288	190	N° 3	16080387..16080555	167	N° 4	16080921..16081381	459
join(16079726..16079953,16080097..16080288,16080387..16080555,16080921..16081381 )

Literature and cross-references AtPrx23 (At2g38390 / PER23 / AtperoxP23 / ATP34)

Literature	Efetova M, Zeier J, Riederer M, Lee CW, Stingl N, Mueller M, Hartung W, Hedrich R, Deeken R.. A central role of abscisic acid in drought stress protection of Agrobacterium-induced tumors on Arabidopsis. Plant Physiol. 2007 Nov;145(3):853-62.
Protein ref.	UniProtKB: O80912
DNA ref.	Phytozome 12: Chr2 (16079726..16081381)
mRNA ref.	GenBank: NM_129395
Cluster/Prediction ref.	Phytozome Gene 12: 19638178 UniGene: At.28466
Omic ref.	AtProteome: At2g38390 ATTED-II: At2g38390 e-FP Browser: At2g38390 ePlant: At2g38390 Genevestigator: At2g38390 TAIR: At2g38390

Protein sequence: AtPrx23 (At2g38390 / PER23 / AtperoxP23 / ATP34)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	349 (320)
PWM (Da):	37963.24 (35149.9)
PI (pH):	8.08 (8.20)	Peptide Signal:	cut: 30 range:30-349

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MGFSSSLSCSAMGALIVGCLLLQASNSNAQLRPDFYFRTCPPIFN
IIGDTIVNELRTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNKNSVRGFDVIDRMKAAIERACPRTVSCADIITIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFSTLTQLKTAFADVGLNRPSDLVALSGGHTFGKAQCQFVTPRLYNFNGTNRPDPSLNPTYLVELRRLCPQNGNGTVLVNFDSVTPTTFDRQYYTNLLNGKGLIQSDQVLFSTPGADTIPLVNQYSSNTFVFFGAFVDAMIRMGNLK
PLTGTQGEIRQNCRVVNPRIRVVENDDGVVSSI

Retrieve as FASTA

Remarks

complete sequence from genomic (chromo 2, 3 introns), 4 cDNA and 17 ESTs.

Promoter►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

AATACAAATC ATCTAGCACG TGATTTTTCA ATTTTAACTG AGTTGGTAAA CGACAAATCA TGTTTATCTT TAAATAAAAT CACTAATTCC ATTTATCTAA ACCTTAATGT TTTGTCAAAA CGTTTTAGGT GGTCACACAT TTGGAAGAGC ACAATGCCAG TTCGTGACGC CTCGTCTCTA CAACTTCAAT GGTACAAACA GTCCAGACCC AAGTCTGAAC CCAACTTACC TTGTCGAACT CCGTCGATTG TGTCCTCAAA ACGGAAACGG CACCGTTCTG GTCAACTTCG ATGTCGTGAC TCCAGATGCT TTCGATAGTC AATACTACAC CAACCTTCGT AATGGGAAAG GTCTTATTCA GAGTGACCAG GAACTCTTTT CGACTCCAGG AGCCGATACG ATCCCTTTAG TAAACCAATA CAGCAGCGAC ATGTCCGTGT TCTTTCGAGC ATTCATTGAC GCAATGATTA GGATGGGAAA TCTTAGACCT TTGACTGGAA CTCAAGGAGA GATTAGACAA AATTGTAGGG TTGTGAATCC ACGAATTAGG GTTGTGGAGA ACGACGATGG TGTTGTGAGT TCTATCTGAT TATGCATGTT GCCATGTTGG GGATATATAT ATGGATATGT AAGAAAGTAT AAAATGCGCA CGTGAGAACA ATTTCGACTA ATAAAAGTTT TCACGAGTTA TGAGATTTAT GAAATTGGTA TTAAGTACAC TTACAATGCA TATATACGTG GTGTTTATAA CACTTCAATT TCTGACATGT ATTCAAGTAG CTTTTGATTT AACATCACGT CGAAATTTAT AATATATATT CAAGCAAATT GTTGAAATAA AATGTCCTAG TTTTTGTCAG CTTTCGTTAC TTATAAATGA GAAGAAAAGA CAAGGAGCTA AACTGCTAAA GTATTAGATT AGGTTAACTT TTGTTAACCA CAAAATCTAG CACATGGACG CGTATGAAGT TGATAAATCA TATATGTATT AGGTAACATT GTTATTTCAG ATTAAATTGT TTTGAGCAAG AATTGTATAA AAAGTTTATC GATTTGTGAA GGTGGCTTCT GAGGCTACAT TTGCGGGATT CACGGGGAAG AGAAGGACAA AACATAAGGA ATTCTATTTT TCATAAAATA TTAATTAGGA AGATAGTTTG AAAATGTTTG CCAATTAGGA AGGACAATCC TTTTAGAAGG TTTTCCGAGA TTTTTTTTTT TGTCTTGTAT CCAATTATAA ATGTACGTAC CTCGTGTATA AATTAAAAAA AAAAAAGTTT AAACATTCCT TTGAAACTAC AACAAACTCA TTTATACAAA TATCCGTCCC CTCAAAAATT CAGATATATC AACAAGAACA CGTCACAAAT AAAACGTAAT TATGGTAACA TGATGATATT ATATTTTCCT ACATAGACAT AACTTGTGTC TAACATGAAT CAACAAACAT ATCTTTTACG ACCCTACATA ATCCAAAATT GATATCAAAT ATCGTACTAA TTTCATTTTC CGTACCACTG TTGAAATTTG TGTCGTTTAT AAATTATTTA TCAAACTTGA AAAATATCTA AGAATAAGAA TATATTGGCG GAATTGAGAA ACATTAGATA CGTACGTCGA TTTGTAGTAA GTAAAAAATG TAGGGGAGAC GGTTCTAAAA AGTTGTAATT GAAGTTAAAA TGATCAATCT TACTTGATTT ATCACAGCGT CGGACAAATA CAGCCAAACA CTACGAGCAA GTTTAATTCT GTCCAAAGAA TATATAGCAC GTCGAAATTA GTTTATTTTA AATTCTAATT ATTATTTATC CTTCAACCAC TCTAGTAAAA CACATGGCCT TAAAAAAAGA CCTAATAGTA TTTTTTAAGA ACACAATACC TAATAGTCTA AAATACCATT AAAGAAAGAC TCGAACATCT
CTATATAGTG TTCCTTCTAG GCCCTTAGTT AATACACACA CTCACAACTC AAATCATCTT TTTGTCTCCC TCCTGAAAAA

Retrieve as FASTA

Terminator +►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

TTATGCATGT TGGGGATATA TGGATATGTA AGAACGTATA AAATGTGTGG GATTGTGGGA ACATTTCGAC TAAATAAAGT TCTCACAAGT TGTGTGATTT ATGAAATTTG GTCTTAATTA ACACTTTTGA TTCGATTTTC TGAGTACTAA AAAAGTGGAT GAATTTCATA ATGAAATGAT ACGTGGTGTT TGTATAACAC TTAACTTTCA ATTGACATAG TTTCATGTTA TTGGAGAAGT TAAATTGTGT GTAAAAATAT AATTCGAACA TGCATCCATT TCTATAAATA AATATCGAGG TTATCGGATT AAACAAAGCT TGTAGGACCT AAATATAGTC ATGAAACTAC AACCCTAATA GAAGTTTCAA ACATAATCAA ACTTTAGTCT TGAGCAAAGA AATAGAAAAT ATATAAAAGT TATACTCTTG TAAGCAAAGA AAAGCCCAAA CGAAGCAAAA CAAGACAAAA AGCCCAGTTT AAAGTAGATG TAAGCAGATT TACTTGCTAC ATCATCAACT CCCCATTTTA CATCGTCCCA ATGAGATATA TCCACTCTTT TCATAGAATT TGATGTTTTC ACACGAATAC GAAATCCCAA ATATATAATC TATCCCTTAT AATTCATAAT TATATACAAA AAATATGCAA TCACACAACT AGCCATTAAA TACTATATAG AAATATCACC ACTTGTCATT TCAAAACAAT ACACTAATTA ATGTCTATAA TTCAATCCTT GTCAGATGGA GATAAGAGAG ACACAATCCA TAATTTTGTT GCTCATTCAT ATAGTTCAAG TGCGTTGGCT CACGGCAAAC ATTTTAAATT TAGACCCACG CCGGAGAAAA TCTAATTAGA CGCATAGTTT ATTATAGTGG ATTTCATTGG GACAAACAAT ATTAGCCGCA TTTTATGTAA TATCTTTCAC TTGGAACACG TGCCCCATAC ACATATGGTC
CCTCCATGCT TTGTACTTAT GTAGTTTTTT GTATGCTACG

Retrieve as FASTA

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGGGTTTTCGTCTTCATTATCTTGCAGTGCTATGGGAGCCCTAATAGTGGGTTGCCTTCTGCTTCAAGCATCAAACTCTAATGCTCAGTTGAGACCTGACTTCTACTTCAGGACTTGC
CCACCTATTTTCAACATCATTGGGGATACCATCGTCAATGAGCTGCGGACTGATCCTCGTATTGCCGCGAGCCTCCTTCGGCTTCACTTCCATGACTGCTTTGTTCGTGTGTAAGGACTT
ACTCAACGTATCTTTTTTGTTAGTAAAAAAAACTACGTCGTCTACTTTTACATATATATATTGAATGGAGGCTAACATCCATTTTTAATGATAAATAATGTCTTCATGTTATGTAACATA
TATGGTTTTATAGGGTTGTGATGCATCGATCTTGCTTGACAATTCCACATCATTCCGGACCGAGAAAGATGCTGCTCCAAACAAAAATTCGGTTCGAGGGTTCGATGTCATAGATAGAAT
GAAAGCAGCCATTGAGAGAGCTTGCCCAAGAACAGTTTCTTGCGCAGATATTATCACCATCGCCTCTCAGATATCAGTTCTTTTGTGGTATGTACATATATATACCTACATGACTTATGA
TATTGATCGGGTGAAGTTAATCCAAATATATTATGAATTTGACATCAATGCTTTATATGTTATAGTCTGGCGGTCCATGGTGGCCAGTTCCGTTGGGGAGAAGAGACAGCGTAGAAGCTT
TCTTCGCTCTGGCTAATACAGCTCTTCCCTCTCCATTTTCCACTCTTACTCAACTTAAAACAGCTTTTGCTGACGTTGGCCTAAACCGCCCTTCGGATTTAGTCGCCCTCTCCGCGGTAA
TATATATTTTCGTTCTTGATCTAGCTAGATACAATTCATTTTATCTATTTATAGCTAGCTAATTACAAGATGATTCATAGAATTATTTTGTATTTATAATTAGAATGATCAACTTCAATT
AATCTATATTTAGTATTAAAAGGCGTTTTTGAGGCATATGAATTAGTTAACATGAGTTTAGTTAGAAAACCCTCTTGCTTCATCTTGAGAAAAAAGACTTAGTAGAAAACCATCTCAAAC
AAATATCTTCTACGTACCACTTGAGTTTGGATTATAAAAGGACTTGGTAGAATGAAAAAGCATGACTCATAATTAAATAAAACGTACAATGTATCTAATCCTTCATTTGTCAAAATGGTA
GGTGGTCACACATTTGGAAAAGCACAATGCCAATTCGTGACACCTCGTCTTTACAACTTCAACGGTACCAACAGACCAGACCCAAGTTTGAACCCAACTTACCTCGTTGAACTCCGTCGA
TTGTGTCCTCAAAACGGAAACGGCACCGTTCTGGTTAACTTCGATTCCGTGACTCCAACTACTTTCGATAGACAATATTACACCAATCTTCTTAATGGGAAAGGTTTGATTCAGAGTGAC
CAAGTGCTTTTCTCAACTCCAGGAGCTGATACGATTCCACTAGTAAACCAATACAGCAGCAACACGTTCGTGTTCTTTGGAGCATTCGTTGATGCAATGATTAGGATGGGAAATCTTAAA
CCTTTGACTGGAACTCAAGGAGAGATAAGACAGAATTGTAGGGTTGTGAATCCAAGAATTAGGGTTGTGGAGAACGACGATGGTGTTGTGAGTTCTATCTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ACACACTCAC AACTCAAATC ATCTTTTTGT CTCCCTCCTG AAAAAATGGG GTTTTCGTCT TCATTATCTT GCAGTGCTAT GGGAGCCCTA ATAGTGGGTT GCCTTCTGCT TCAAGCATCA AACTCTAATG CTCAGTTGAG ACCTGACTTC TACTTCAGGA CTTGCCCACC TATTTTCAAC ATCATTGGGG ATACCATCGT CAATGAGCTG CGGACTGATC CTCGTATTGC CGCGAGCCTC CTTCGGCTTC ACTTCCATGA CTGCTTTGTT CGTGGTTGTG ATGCATCGAT CTTGCTTGAC AATTCCACAT CATTCCGGAC CGAGAAAGAT GCTGCTCCAA ACAAAAATTC GGTTCGAGGG TTCGATGTCA TAGATAGAAT GAAAGCAGCC ATTGAGAGAG CTTGCCCAAG AACAGTTTCT TGCGCAGATA TTATCACCAT CGCCTCTCAG ATATCAGTTC TTTTGTCTGG CGGTCCATGG TGGCCAGTTC CGTTGGGGAG AAGAGACAGC GTAGAAGCTT TCTTCGCTCT GGCTAATACA GCTCTTCCCT CTCCATTTTC CACTCTTACT CAACTTAAAA CAGCTTTTGC TGACGTTGGC CTAAACCGCC CTTCGGATTT AGTCGCCCTC TCCGGTGGTC ACACATTTGG AAAAGCACAA TGCCAATTCG TGACACCTCG TCTTTACAAC TTCAACGGTA CCAACAGACC AGACCCAAGT TTGAACCCAA CTTACCTCGT TGAACTCCGT CGATTGTGTC CTCAAAACGG AAACGGCACC GTTCTGGTTA ACTTCGATTC CGTGACTCCA ACTACTTTCG ATAGACAATA TTACACCAAT CTTCTTAATG GGAAAGGTTT GATTCAGAGT GACCAAGTGC TTTTCTCAAC TCCAGGAGCT GATACGATTC CACTAGTAAA CCAATACAGC AGCAACACGT TCGTGTTCTT TGGAGCATTC GTTGATGCAA TGATTAGGAT GGGAAATCTT AAACCTTTGA CTGGAACTCA AGGAGAGATA AGACAGAATT GTAGGGTTGT GAATCCAAGA ATTAGGGTTG TGGAGAACGA CGATGGTGTT GTGAGTTCTA TCTGATTATG CATGTTGGGG ATATATGGAT ATGTAAGAAC GTATAAAATG TGTGGGATTG TGGGAACATT TCGACTAAAT AAAGTTCTCA CAAGTTGTGT GATTTATGAA
ATTTGGTCTT AATTAACACT TTT

Retrieve as FASTA