Entry information : TocNAnPrx1
Entry ID 11625
Creation 2013-02-04 (Marcel Zamocky)
Last sequence changes 2016-02-23 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-02-23 (Achraf Jemmat)
Peroxidase information: TocNAnPrx1
Name TocNAnPrx1
Class Other non animal peroxidase    [Orthogroup: NAnPrx001]
Taxonomy Eukaryota Bacillariophyta Coscinodiscophyceae Thalassiosiraceae Thalassiosira
Organism Thalassiosira oceanica    [TaxId: 159749 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TocNAnPrx1
start..stop
S start..stop
MviNAnPrx01 152 2.23e-40 432..738 25..317
HvuNAnPrx02 111 7.42e-27 433..735 27..329
AqNAnPrx01 112 1.15e-26 456..740 56..342
HvuNAnPrx01 105 8.5e-25 429..736 29..333
Gene structure Fichier Exons


exon

Literature and cross-references TocNAnPrx1
Literature Lommer M., Specht M., Roy A.S., Kraemer L., Andreson R., Gutowska M.A., Wolf J., Bergner S.V., Schilhabel M.B., Klostermeier U.C., Beiko R.G., Rosenstiel P., Hippler M., Laroche J. Genome and low-iron response of an oceanic diatom adapted to chronic iron limitation. (2012) Genome Biology 13: R66.
Protein ref. GenBank:   EJK59697.1 UniProtKB:   K0SMN7
DNA ref. GenBank:   AGNL01022521.1
Protein sequence: TocNAnPrx1
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   740
PWM (Da):   %s   79967.62 Transmb domain:   %s   i7-24o
PI (pH):   %s   4.95
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MKRPAKKERRPFVCFSEKEAERRGRAAEVHKPLFCFQQFRQGGEDDEESQHTTALVFPQPPKAIPSAGLHTIADLTFGSASALKPSAPEAQSIDRPLVHSCKRYPIEMAAAKYLCGAAVL
ASAVFSANVEESTAENPSEATVLSPQHAEAAAAATPQEEEVEAGRELWGAPAWGGHYYWPPRPYYGKGGKSGGNGSWSGGKGGKSGGDDDDGWSGWSGWSGRPSWGGWPADDDGYYYGKG
GKSGSYGGKGAKSGSYSDDDDGWSWGGGWPGWGPPPPRPCYCPPGKSGKTKGGKTKGRGLEAESAGGGDAEGRQLWGSPWYGPHYSGCHCGWPNY
GGYGWGRPPAWGGQWVYVGGWSHHH
YHHSLGKSGKSGGYDDDGYYYGDDAFNWSGDGWTGPAAPNNDEIQEVVEIYSKGGHVAGWRDDGWDNDGYYKEDIDFVRAEIVKLVEASNRELIPKFIRLGFHDCV
GGCDGCIDPTDADN
RGLEEAIDAISYITDKYNDSYSRADVWALATLVSADLAITGGRPDGLHFPMRYIGRKDCSGADSKGLGGPEVKMPSNDFTTHELLEFFREYFGFDTEEVVVIM
GVHSVGVAHRENVGFGH
IGEESGWAFNAKDYILDNRYYGMLTGGEGRDWELELAENNGGIPNRYQWVHRSGADESPIMTNSDIALVRDLQGHIVADSEGNNGLVTCGYAPTSKAPEGYPTCPMARATLELMEDYSMD
NAKFLTSFGRVLAKMLKNGY

Retrieve as FASTA  
Remarks complete sequence from genomic (4 introns).
DNA
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CDS
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