Entry information : AeuPGHS01_201684 (g17742.t1 / Ae201684_17742.1)
Entry ID 11642
Creation 2013-02-13 (Christophe Dunand)
Last sequence changes 2014-03-26 (Catherine Mathe)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2014-03-26 (Catherine Mathe)
Peroxidase information: AeuPGHS01_201684 (g17742.t1 / Ae201684_17742.1)
Name (synonym) AeuPGHS01_201684 (g17742.t1 / Ae201684_17742.1)
Class H synthase    [Orthogroup: PGHS001]
Taxonomy Eukaryota Saprolegniaceae Aphanomyces
Organism Aphanomyces euteiches    [TaxId: 100861 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AeuPGHS01_201684
start..stop
S start..stop
AeuPGHS02_201684 793 0 2..444 20..462
SuCyOx 308 2e-99 6..441 134..585
MxPGHS01 310 3e-99 5..441 177..648
NcPGHS01 303 5e-97 5..443 177..638
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 48386..49720 1335  
complement(join(48386..49720))


exon

Literature and cross-references AeuPGHS01_201684 (g17742.t1 / Ae201684_17742.1)
Protein sequence: AeuPGHS01_201684 (g17742.t1 / Ae201684_17742.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   445
PWM (Da):   %s   50652.85  
PI (pH):   %s   7.08
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MWVPAWIQFV VHDLLDHPQD YNAPQLRIGS QTLYKTQSVP GSPNVYANRL DHFLDGSSVY GSVKLNGTLL RLPDGSLSLP DDYLPLDGNM EALGVPKNIW FGLSMITYIM AKEHNAVVKM  FHSKYPKWTG DQCFEKARLV VSALIAKIQG LEWTEAIIQN KIGQYAQDHM FYGLLGKASR KLFGTQKWLG NFVCGIWGGN LEYRGVKYAT SEEFVSVYRM HSLLPDDFTV RSFKDNSDLL  KFGLKDAIFE GSHKINTNVS RLDMVYSMGT SYPGALVLNN FPNALRSFQP TDYNHTIDLA AVDIIRDRER AVPRYNAFRR SLLLTPIKTW NDLTSDKDVI QKLQKVYGND VELLDLLVGT 
SAEEKLPGFV FGETIYTVFV AQTQRRIESD RFFTEDFRPE VYTPEGYNWV ESTTFASILL RHYPSLKKYL DADDNAFLPW KAKN* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron) and RNAseq. scaffold81:48386..49720 (- strand)
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTGGGTGC CAGCGTGGAT TCAGTTTGTC GTCCATGACT TGCTCGACCA TCCCCAAGAC TACAACGCCC CACAACTTCG CATCGGCAGC CAGACTTTGT ACAAGACCCA GTCAGTCCCT  GGCTCCCCCA ATGTCTATGC GAACCGTCTG GATCACTTCT TGGATGGCTC TTCAGTCTAT GGCTCTGTGA AACTCAATGG AACCTTGCTT CGTCTCCCTG ATGGGTCGTT GAGCTTGCCA  GACGATTACT TGCCATTGGA TGGCAACATG GAGGCTCTCG GTGTTCCAAA GAACATTTGG TTTGGTCTCT CCATGATCAC TTATATCATG GCAAAAGAAC ACAATGCGGT CGTCAAGATG  TTTCACTCCA AGTACCCAAA GTGGACGGGA GATCAATGCT TCGAGAAGGC GCGTCTGGTC GTTTCGGCCT TGATTGCCAA GATCCAAGGA CTCGAGTGGA CCGAGGCGAT CATCCAAAAC  AAGATCGGCC AGTATGCGCA AGATCACATG TTCTACGGTC TCCTCGGCAA AGCGTCGCGC AAGCTCTTTG GAACGCAGAA GTGGCTTGGA AACTTTGTTT GTGGCATTTG GGGTGGCAAC  TTGGAGTACC GTGGGGTCAA GTACGCCACC TCTGAAGAAT TCGTTTCGGT CTACCGCATG CACTCGTTGC TGCCGGATGA CTTTACCGTT CGAAGCTTCA AGGACAACTC GGACCTGCTC  AAGTTTGGAT TGAAAGACGC CATTTTCGAA GGCAGCCACA AAATCAACAC CAATGTGTCC CGCTTGGACA TGGTCTACTC GATGGGAACA TCGTACCCTG GTGCTCTGGT GCTCAACAAC  TTTCCCAACG CGTTGCGATC GTTCCAGCCC ACTGACTACA ACCACACGAT TGACTTGGCT GCCGTTGATA TCATTCGCGA TCGGGAACGT GCTGTGCCGC GATACAATGC CTTCCGCCGC  AGTCTTCTCC TTACTCCCAT CAAGACTTGG AATGATCTGA CATCGGACAA GGATGTGATC CAGAAGCTCC AAAAGGTGTA CGGCAACGAT GTGGAGCTGT TGGATTTGCT CGTTGGAACG  TCAGCGGAAG AAAAACTGCC TGGCTTTGTC TTTGGTGAAA CCATCTACAC GGTCTTCGTT GCTCAGACCC AACGTCGCAT TGAGAGCGAT CGTTTCTTCA CGGAAGACTT CCGTCCTGAG  GTGTACACGC CTGAGGGTTA CAACTGGGTC GAATCGACGA CCTTTGCGTC CATCTTATTG CGCCACTATC CATCGCTGAA GAAGTATTTG GACGCGGACG ATAATGCCTT CTTACCATGG 
AAAGCAAAGA ATTAA 

Retrieve as FASTA