Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
200 |
PWM (Da): |
22288.47 |
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PI (pH):
| 4.68 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MVATIRKPAP AFTAEAVING RFEEVSLKDY LGQYVVLFFY PLDFTFVCPT EIIAFSDRIE DFKKLNTAVL AASVDSKFSH LAWIKHPRND GGLGEMKIPV ISDITKKISK DYGVLIEDDA
DADNGVALRG LFIIDTKGVL RQITINDLPV GRNVDEILRL VEAFQYTDEF GEVCPANWTA GKATMVANPE DSKSYFKAYH *
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (no intron) and RNAseq. Tandem duplication. scaffold47:258069..258671 |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGTCGCCA CGATCCGCAA GCCCGCTCCT GCTTTCACCG CCGAAGCCGT CATCAACGGA CGCTTCGAAG AAGTCAGTCT CAAGGACTAC TTGGGACAAT ACGTCGTCCT CTTCTTCTAC
CCGCTCGACT TCACCTTCGT CTGCCCCACG GAAATCATAG CCTTCTCGGA CCGCATTGAA GACTTCAAGA AGCTCAACAC GGCTGTCTTG GCGGCGTCTG TCGACTCCAA GTTCTCCCAC
TTGGCCTGGA TCAAGCACCC CCGCAACGAC GGTGGTTTGG GCGAAATGAA GATCCCGGTC ATCTCGGATA TCACCAAGAA GATCTCGAAG GACTACGGTG TGTTGATCGA AGACGACGCG
GATGCCGACA ACGGCGTGGC GTTGCGTGGT TTGTTCATCA TTGACACGAA GGGTGTGTTG CGTCAAATCA CGATCAACGA CTTGCCGGTG GGCCGCAACG TGGACGAGAT CTTGCGTTTG
GTGGAAGCTT TCCAATACAC GGATGAGTTT GGTGAAGTGT GTCCTGCGAA CTGGACTGCT GGTAAGGCCA CGATGGTCGC CAACCCTGAA GACTCGAAGT CTTACTTCAA GGCTTACCAT
TAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGTCGCCA CGATCCGCAA GCCCGCTCCT GCTTTCACCG CCGAAGCCGT CATCAACGGA CGCTTCGAAG AAGTCAGTCT CAAGGACTAC TTGGGACAAT ACGTCGTCCT CTTCTTCTAC
CCGCTCGACT TCACCTTCGT CTGCCCCACG GAAATCATAG CCTTCTCGGA CCGCATTGAA GACTTCAAGA AGCTCAACAC GGCTGTCTTG GCGGCGTCTG TCGACTCCAA GTTCTCCCAC
TTGGCCTGGA TCAAGCACCC CCGCAACGAC GGTGGTTTGG GCGAAATGAA GATCCCGGTC ATCTCGGATA TCACCAAGAA GATCTCGAAG GACTACGGTG TGTTGATCGA AGACGACGCG
GATGCCGACA ACGGCGTGGC GTTGCGTGGT TTGTTCATCA TTGACACGAA GGGTGTGTTG CGTCAAATCA CGATCAACGA CTTGCCGGTG GGCCGCAACG TGGACGAGAT CTTGCGTTTG
GTGGAAGCTT TCCAATACAC GGATGAGTTT GGTGAAGTGT GTCCTGCGAA CTGGACTGCT GGTAAGGCCA CGATGGTCGC CAACCCTGAA GACTCGAAGT CTTACTTCAA GGCTTACCAT
TAA
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Retrieve as FASTA
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